Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_C15
(651 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1000 - 23220878-23221821,23222164-23223001 62 5e-10
05_04_0319 + 20171486-20171800,20171882-20171956,20172160-201721... 60 2e-09
03_02_0187 - 6248226-6249226,6249296-6250148 50 1e-06
05_01_0121 - 833885-833949,834180-834430,834545-834604,834893-83... 49 3e-06
03_05_0799 + 27809301-27811550 32 0.34
02_05_1317 - 35683659-35683756,35683904-35683966,35684068-356841... 32 0.34
02_05_0839 - 32113992-32114210,32114321-32114484,32114612-321147... 31 1.1
06_03_0662 - 23229957-23230204,23231021-23231160,23231257-232313... 30 1.4
01_06_0714 + 31413195-31413221,31414238-31414786 29 2.4
05_04_0031 + 17353292-17354353 29 4.2
04_03_0980 + 21406822-21409496,21410322-21410376 29 4.2
01_06_1626 - 38734128-38734160,38734386-38734560,38734819-387348... 29 4.2
11_06_0106 + 20181197-20181535,20188754-20188868,20188929-201892... 28 5.6
02_04_0661 - 24802868-24802921,24803004-24803089,24803178-248032... 28 5.6
10_08_0552 - 18714062-18714191,18714288-18714565,18714921-187149... 28 7.4
01_06_0559 + 30235379-30235584,30235679-30235814,30235885-30235938 28 7.4
04_01_0148 + 1710369-1710531,1711821-1712279,1712769-1712915,171... 27 9.8
01_06_0944 + 33211652-33212427,33212492-33212660,33212825-332129... 27 9.8
>07_03_1000 - 23220878-23221821,23222164-23223001
Length = 593
Score = 61.7 bits (143), Expect = 5e-10
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 6/174 (3%)
Frame = +1
Query: 148 IWPRPQMQSIEIPYYKFD-SDVLEIKVIEHDCPILSNAVQRSLAVLRDMLR-IASPYVNR 321
+WP+P S P+ S + + +LS A + + +L + R + +P VN
Sbjct: 35 VWPKPTSMSWAEPHMAVRVSSSFHVVAPSGNAHLLSAARRYAALLLAERYRPLVTPAVNV 94
Query: 322 NAPQQVLDDDTYDGPLKSLSIYLTSPCEEYPHFGMIESYNLTI---AADSTLRSSSIWGI 492
A L L++ ++ H G+ ESY L I A +T+ +++ WG
Sbjct: 95 TAGGAGAGAAGRGAELGYLTLAVSDLHAPLQH-GVDESYALEILPAGAAATVTAATAWGA 153
Query: 493 LRGLESWTHLFHLSDNRDQLHINKG-EVHDFPRYPHRGLLVDTSRHYISMSNIL 651
+RGLE+++ L + + G V D P YPHRGL++DT R Y +++IL
Sbjct: 154 MRGLETFSQLAWWCGRERAVLVAAGVRVEDRPLYPHRGLMLDTGRTYFPVADIL 207
>05_04_0319 +
20171486-20171800,20171882-20171956,20172160-20172195,
20172302-20172413,20173082-20173152,20173287-20173417,
20173718-20173783,20174003-20174103,20174311-20174370,
20174463-20174496,20174852-20174950,20175019-20175078,
20175700-20175874,20175900-20175950,20176603-20176632
Length = 471
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Frame = +1
Query: 367 LKSLSIYLTSPCEEYPHFGMIESYNLTIAADST-----LRSSSIWGILRGLESWTHL--F 525
L +++ + P +E +FG+ ESYNL++ A + + + +++G L LE+++ L F
Sbjct: 92 LAGVNVVVHLPGDEL-NFGVDESYNLSVPATGSPIYAQIEAQTVFGALHALETFSQLCNF 150
Query: 526 HLSDNRDQLHINKGEVHDFPRYPHRGLLVDTSRHYI 633
+ +L + D PR+P+RGLL+DTSRHY+
Sbjct: 151 DFTSRLIELQSAPWSITDMPRFPYRGLLIDTSRHYL 186
>03_02_0187 - 6248226-6249226,6249296-6250148
Length = 617
Score = 50.4 bits (115), Expect = 1e-06
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Frame = +1
Query: 121 PEYPAAKGAIWPRPQMQSIEIPYYKFDSDVLEIK-VIEHDCPILSNAVQRSLAVLRDMLR 297
P A K +WP+P S Y S ++ V+ H P L AV ++R
Sbjct: 39 PPLLAQKVQVWPKPTSISWPSAVYAPLSPSFSVRAVLSH--PSLRQAVAFYTRLIR---- 92
Query: 298 IASPYVNRNAPQQVLDDDTYDG-PLKSLSIYLTSPCEEYPHFGMI-ESYNLTIAADS--- 462
R+AP + T P+++L++ ++ P + P + ESY L++ DS
Sbjct: 93 -----AERHAPLVPPANYTLSRVPVRTLTLSVSDP--DVPLGPAVDESYTLSVLPDSGSA 145
Query: 463 TLRSSSIWGILRGLESWTHLFHLSDNR---DQLHINKG-EVHDFPRYPHRGLLVDTSRHY 630
+ +++ WG +RGLE+++ L Q + G E+ D P + HRG+L+DT+R++
Sbjct: 146 DISAATPWGAIRGLETFSQLAWAGGGAASGGQPIVPSGIEISDRPHFTHRGILLDTARNF 205
Query: 631 ISMSNIL 651
+ +IL
Sbjct: 206 YPVRDIL 212
>05_01_0121 -
833885-833949,834180-834430,834545-834604,834893-834926,
835746-835805,836409-836509,836939-837039,837209-837289,
837580-837650,837738-837849,838138-838173,838865-838951,
839055-839396
Length = 466
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Frame = +1
Query: 388 LTSPCEEYPHFGMIESYNLTIAA---------DSTLRSSSIWGILRGLESWTHL--FHLS 534
+ + +E G+ ESY + +AA +T+ +++I+G +RGLE+++ L F+
Sbjct: 107 VVASADEKLELGVDESYTIYVAAAGGVNSIVGGATIEANTIYGAIRGLETFSQLCVFNYD 166
Query: 535 DNRDQLHINKGEVHDFPRYPHRGLLVDTSRHYISMSNI 648
++ + D PR+ RGLL+DTSRH++ + I
Sbjct: 167 TKNVEVRHAPWYIEDEPRFAFRGLLLDTSRHFLPVDVI 204
>03_05_0799 + 27809301-27811550
Length = 749
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1
Query: 220 KVIEHDCPILSNAVQRSLAVLRDMLRIASPYVNR 321
KV+EH P++ A SLAVLR +L + S VNR
Sbjct: 90 KVLEHRTPLMVAATYGSLAVLRLLLSLPSVDVNR 123
>02_05_1317 -
35683659-35683756,35683904-35683966,35684068-35684182,
35684385-35684486,35684687-35684756,35684878-35684952,
35685188-35685279,35685386-35685493,35685560-35685640,
35685728-35685771,35685858-35685984
Length = 324
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -3
Query: 346 HLRPVVAHCGLHTDSRFGA--YLSIPPD 269
HL P V HCG H++ FGA YL PD
Sbjct: 117 HLLPGVYHCGYHSEDSFGATSYLITHPD 144
>02_05_0839 -
32113992-32114210,32114321-32114484,32114612-32114708,
32115822-32115944,32116770-32117141
Length = 324
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 181 IPYYKFDSDVLEIKVIEHDCPILSNAVQRSLAVLRD-MLRIASPYVNRNAPQQVLDDDTY 357
IPYY FD V +++ + SN V+R ++ LRD + R P + P +V+ +
Sbjct: 143 IPYYSFDQFVRKVEKVG-----ASNRVRRCVSELRDRVARGGDPTLLHEPPVEVIPEGEP 197
Query: 358 DG 363
DG
Sbjct: 198 DG 199
>06_03_0662 -
23229957-23230204,23231021-23231160,23231257-23231394,
23231501-23231676,23232071-23232152,23233531-23233666,
23237028-23237145
Length = 345
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 415 HFGMIESYNL--TIAADSTLRSSSIWGILRGLESWTHLFHLSDNRDQLHINKG 567
HFG+++SY++ T+ + S S I+ G + W H+F +++ NKG
Sbjct: 217 HFGLVKSYDMPCTVESASLEPKSGSKFIVGGEDMWVHVFDFFTG-EEITCNKG 268
>01_06_0714 + 31413195-31413221,31414238-31414786
Length = 191
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 219 NFKYITIKFVVRNFYRLHLRSWPNCTF 139
NF ++ + +R RL +R WPNC F
Sbjct: 76 NFAWLLLHNRLRTADRLQIRQWPNCYF 102
>05_04_0031 + 17353292-17354353
Length = 353
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +1
Query: 433 SYNLTIAADSTLRSSSIWGILRGLESWTHLFHLSDNRDQLHINKGEVHDFPRYPHRGLLV 612
S+ L+ + L +S G + W H + R + + +G HDFPR R L
Sbjct: 232 SWTLSREQGNKLLASRFRGDRLYICDWPGCVHAEERRKYM-VFRGVFHDFPRSQVRRALR 290
Query: 613 DTSRHYISM 639
DT R +++
Sbjct: 291 DTRRPTVAV 299
>04_03_0980 + 21406822-21409496,21410322-21410376
Length = 909
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 186 RNFYRLHLRSWPNCTFRCWIFGSRFHDMQTGH 91
+N LHLRS P F ++ S F D++T H
Sbjct: 734 QNLQHLHLRSCPRLQFVLPVWASSFPDLKTLH 765
>01_06_1626 -
38734128-38734160,38734386-38734560,38734819-38734878,
38734961-38735059,38735191-38735224,38735315-38735374,
38735596-38735696,38735949-38736014,38736695-38736825,
38736946-38737038,38737273-38737338,38737459-38737494,
38738308-38738382,38738475-38738792
Length = 448
Score = 28.7 bits (61), Expect = 4.2
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Frame = +1
Query: 367 LKSLSIYLTSPCEEYPHFGMIESYNLTI-AADSTLR----SSSIWGILRGLESWTHLF-H 528
L +++ + SP +E FG+ ESYNL++ A LR + +++G L L++ + L
Sbjct: 93 LTGVNVVVHSPEDELK-FGVDESYNLSVPTAGYPLRVQIEAQTVFGALHALQNSSRLLGE 151
Query: 529 LSDNRDQLHINKGEVHDFPRYPHRGLLVDTSRHYISMSNI 648
++D L DF R L DTSRHY+ ++ I
Sbjct: 152 FLTHQDFL------TEDFLLDQMR-LHADTSRHYLPVTVI 184
>11_06_0106 +
20181197-20181535,20188754-20188868,20188929-20189200,
20189278-20189416,20189534-20189842,20190263-20190579,
20190907-20191080
Length = 554
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = -1
Query: 453 GDRQIVALDHAEMRIFFTG*CQVNA*TLQWSVVCIII*DLLWRIAVYIRTRDS 295
GD+QI L H++ ++FF C V W V ++ WRIA Y R DS
Sbjct: 443 GDQQIPEL-HSDDQMFFLFGCGVGFVVGSWVVFFSLLFVKTWRIA-YFRLFDS 493
>02_04_0661 -
24802868-24802921,24803004-24803089,24803178-24803274,
24803378-24803475,24804705-24804882,24805485-24805676
Length = 234
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 121 PEYPAAKGAIWPRPQMQSIEIPYYKFDSDVL 213
P PAA A++P PQ+Q ++ + K DS ++
Sbjct: 47 PAAPAAYNAVYPMPQVQQVQQLFQK-DSQII 76
>10_08_0552 -
18714062-18714191,18714288-18714565,18714921-18714968,
18715222-18715308,18715522-18715634,18717140-18717349,
18717368-18717434
Length = 310
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +1
Query: 481 IWGILRGLESWTHLFHLSDNRDQLHINKGEVHDFPRYPHRGLLVDT 618
+WG L E WTHL D + + P PH LLV T
Sbjct: 172 LWGELNDTEKWTHLRSCLVKSDDCN-GLSRRYKVPPLPHIFLLVTT 216
>01_06_0559 + 30235379-30235584,30235679-30235814,30235885-30235938
Length = 131
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 178 LSIAFAVLAKLHLSLLDIRVPVPRYANRSLKKRLKYL 68
LS+A + AK SL + +P YAN S L+YL
Sbjct: 35 LSMALMISAKQRGSLKIFGIEIPLYANWSFSDSLEYL 71
>04_01_0148 +
1710369-1710531,1711821-1712279,1712769-1712915,
1713004-1714170,1714378-1714430
Length = 662
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 264 TESGGIERYAPNRESVCKPQCATTGL 341
++ G E Y PN+E+ CK C + +
Sbjct: 49 SDGGNQEEYDPNKENPCKRSCGSMSI 74
>01_06_0944 +
33211652-33212427,33212492-33212660,33212825-33212936,
33213061-33213159,33213237-33213394,33214911-33215062,
33215162-33215249,33215399-33215476,33215516-33215690,
33216701-33217002
Length = 702
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 359 SYVSSSKTCCGALRFTYGLAIRSISLNTARLRWTAFD 249
+Y S +K + + L +RS+S N +RLRW +FD
Sbjct: 123 AYGSGAKDTEATILDSGNLVLRSVS-NRSRLRWQSFD 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,006,382
Number of Sequences: 37544
Number of extensions: 352706
Number of successful extensions: 923
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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