Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_C13
         (432 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848...    29   1.6  
01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,356...    29   2.1  
08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587...    27   4.9  
08_02_1427 - 27020819-27020918,27021017-27021081,27021160-270212...    27   8.6  

>02_04_0179 +
           20682852-20684510,20684593-20684661,20684741-20684809,
           20686779-20688206
          Length = 1074

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 239 FTLYAPRKYVRQCGDKEAC 295
           F + APR+YV QC D+ AC
Sbjct: 760 FGIDAPRRYVFQCRDRHAC 778


>01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,
            3560853-3561491,3562154-3562450,3562553-3563407,
            3564363-3564545,3565041-3565118,3565762-3565974,
            3566075-3566238,3566357-3566445,3566761-3566891,
            3566980-3567148,3567255-3567327,3567525-3567606,
            3567677-3567808,3568743-3568818,3568965-3569065,
            3569446-3569636,3569738-3569912,3570604-3570854,
            3571327-3571603,3572184-3572267,3572496-3573206
          Length = 1867

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -3

Query: 229  DSPVVAITSEDARPRCSIACRAIPLRCIRIRYVRIINIGSTEIFFRHTGLSA-LRTIRTT 53
            DS  +    ED+   C  +C A+P      + V ++N     +F R+T L+  L +++ +
Sbjct: 1197 DSSSLLFDEEDSASLCMGSCLALPSVLAFCQKVELLNDDLDALFNRYTSLATNLLSLKKS 1256

Query: 52   GVI 44
            G I
Sbjct: 1257 GTI 1259


>08_02_1091 +
           24256025-24256190,24256806-24257978,24258066-24258733,
           24258994-24260065,24260241-24260563,24260647-24260835,
           24261400-24261506,24262103-24262163,24262617-24262634
          Length = 1258

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 20/72 (27%), Positives = 31/72 (43%)
 Frame = +3

Query: 153 RKGIARQAMEHRGRASSDVIATTGLSS*ILHCTLRENMSDNAATKKLAAPSPLSFRCSKQ 332
           +K  A+    H+GR+ +DVI   G SS      +  N   + A   L +    S  C   
Sbjct: 496 KKSDAQSNNSHQGRSVADVIQVQGNSS---FEGIEINCQSDHALYSLCSTMSTSMDCQPD 552

Query: 333 TLQKMTLRLNLT 368
            L KM  R +++
Sbjct: 553 ILDKMENRADMS 564


>08_02_1427 -
           27020819-27020918,27021017-27021081,27021160-27021246,
           27021398-27021466,27022168-27022219,27022443-27022525,
           27022677-27022753,27022880-27023074,27023204-27023261,
           27023862-27023956,27024605-27024758
          Length = 344

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +1

Query: 157 KELHDRQWNTGVVRPPTLLRLRDCLHRFY-TVRSA-KICQTMRRQRSLL 297
           KELH  +WN G V P   L     +  FY TV +  KIC       SLL
Sbjct: 227 KELHSIKWNAGAVLP--FLGFALAMFLFYSTVPTVLKICGATMLNLSLL 273


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,724,020
Number of Sequences: 37544
Number of extensions: 212745
Number of successful extensions: 565
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)