Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_C13
         (432 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81036-5|CAB02743.2|  768|Caenorhabditis elegans Hypothetical pr...    33   0.12 
U53150-10|AAA96130.3|  433|Caenorhabditis elegans Hypothetical p...    27   7.7  

>Z81036-5|CAB02743.2|  768|Caenorhabditis elegans Hypothetical
           protein C16C2.3a protein.
          Length = 768

 Score = 32.7 bits (71), Expect = 0.12
 Identities = 24/64 (37%), Positives = 28/64 (43%)
 Frame = +3

Query: 129 LTYRIRMQRKGIARQAMEHRGRASSDVIATTGLSS*ILHCTLRENMSDNAATKKLAAPSP 308
           L YR+     GI+    E R  ASSD  A       + HC LRE M+     K    PS 
Sbjct: 292 LNYRLNTDMYGISND--EVRRIASSDKFADL-----LQHCQLREQMARGTVFKDFEEPST 344

Query: 309 LSFR 320
           L FR
Sbjct: 345 LPFR 348


>U53150-10|AAA96130.3|  433|Caenorhabditis elegans Hypothetical
           protein F20A1.9 protein.
          Length = 433

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 7/31 (22%), Positives = 22/31 (70%)
 Frame = +3

Query: 81  SPVCRKKISVLPILIILTYRIRMQRKGIARQ 173
           SP+CR K+S+L ++ +   ++++++  + ++
Sbjct: 301 SPLCRIKVSILEVIPVGVIKVKLRKADLLKE 331


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,125,613
Number of Sequences: 27780
Number of extensions: 180252
Number of successful extensions: 488
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)