Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_C05
(470 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457109-1|CAG33390.1| 126|Homo sapiens ZNRD1 protein. 99 4e-21
BX088647-3|CAI95579.1| 126|Homo sapiens zinc ribbon domain cont... 99 4e-21
BC050608-1|AAH50608.1| 126|Homo sapiens zinc ribbon domain cont... 99 4e-21
BC010898-1|AAH10898.1| 126|Homo sapiens zinc ribbon domain cont... 99 4e-21
AL845439-2|CAI18538.1| 126|Homo sapiens zinc ribbon domain cont... 99 4e-21
AL671859-2|CAI17577.1| 126|Homo sapiens zinc ribbon domain cont... 99 4e-21
AL669914-2|CAI18176.1| 126|Homo sapiens zinc ribbon domain cont... 99 4e-21
AF230338-1|AAG50160.1| 126|Homo sapiens nuclear RNA polymerase ... 99 4e-21
AF230337-1|AAG50159.1| 126|Homo sapiens nuclear RNA polymerase ... 99 4e-21
AF024617-1|AAF40469.1| 126|Homo sapiens transcription-associate... 99 4e-21
AB202082-1|BAE78600.1| 126|Homo sapiens zinc ribbon domain cont... 99 4e-21
Z69719-2|CAI95605.1| 108|Homo sapiens polymerase (RNA) III (DNA... 36 0.054
DQ431198-2|ABD95903.1| 108|Homo sapiens DNA-directed RNA polyme... 36 0.054
BC011932-1|AAH11932.1| 108|Homo sapiens polymerase (RNA) III (D... 36 0.054
AF126531-1|AAD31424.1| 108|Homo sapiens putative DNA-directed R... 36 0.054
AF060223-1|AAG43123.1| 108|Homo sapiens My010 protein protein. 36 0.054
AF051316-1|AAF18268.1| 108|Homo sapiens RNA polymerase III subu... 36 0.054
AE006462-2|AAK61210.1| 108|Homo sapiens RNA polymerase III subu... 36 0.054
X62585-1|CAA44470.1| 301|Homo sapiens transcription elongation ... 35 0.12
X57198-1|CAA40484.1| 280|Homo sapiens transcription elongation ... 35 0.12
M81601-1|AAA61138.1| 301|Homo sapiens transcription elongation ... 35 0.12
CR542221-1|CAG47017.1| 301|Homo sapiens TCEA1 protein. 35 0.12
BT019995-1|AAV38798.1| 301|Homo sapiens transcription elongatio... 35 0.12
BC072460-1|AAH72460.1| 301|Homo sapiens transcription elongatio... 35 0.12
BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongatio... 35 0.16
AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongatio... 35 0.16
AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongatio... 35 0.16
AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongatio... 35 0.16
X73534-1|CAA51940.1| 301|Homo sapiens transcription elongation ... 34 0.22
AK097798-1|BAC05174.1| 404|Homo sapiens protein ( Homo sapiens ... 34 0.22
D50495-1|BAA09089.1| 299|Homo sapiens transcription elongation ... 34 0.29
CR456940-1|CAG33221.1| 299|Homo sapiens TCEA2 protein. 34 0.29
BC018896-1|AAH18896.1| 299|Homo sapiens transcription elongatio... 34 0.29
AL590548-5|CAD11901.1| 272|Homo sapiens transcription elongatio... 34 0.29
AL590548-4|CAD11900.1| 270|Homo sapiens transcription elongatio... 34 0.29
AL590548-1|CAI13198.1| 299|Homo sapiens transcription elongatio... 34 0.29
BC051741-1|AAH51741.1| 78|Homo sapiens ZNRD1 protein protein. 31 2.0
Z23102-1|CAA80649.1| 125|Homo sapiens RNA Polymerase II subunit... 30 4.6
BC067794-1|AAH67794.1| 125|Homo sapiens polymerase (RNA) II (DN... 30 4.6
BC017112-1|AAH17112.1| 125|Homo sapiens polymerase (RNA) II (DN... 30 4.6
AD001527-2|AAB51181.1| 125|Homo sapiens HUMAN DNA-DIRECTED RNA ... 30 4.6
AF011573-1|AAB84385.1| 1029|Homo sapiens zinc finger protein pro... 29 6.1
AC003973-1|AAB94784.1| 1167|Homo sapiens ZNF91L protein. 29 6.1
>CR457109-1|CAG33390.1| 126|Homo sapiens ZNRD1 protein.
Length = 126
Score = 99 bits (238), Expect = 4e-21
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +1
Query: 82 EIMSTESPLSTSTAFCARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFNTI 261
++ +T S + FC+ CGS+LPL +V C C + ++ + ++ F+ +
Sbjct: 5 DLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRDFEGKVVKTSVVFHQL 64
Query: 262 SVITNENILHTDGPE--GPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKE 435
++ +GPE GPVV+R+C +CG++ M+Y T Q+RSADEGQTVFYTC CK++E
Sbjct: 65 GTAMPMSV--EEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKFQE 122
Query: 436 TENS 447
E+S
Sbjct: 123 KEDS 126
>BX088647-3|CAI95579.1| 126|Homo sapiens zinc ribbon domain
containing 1 protein.
Length = 126
Score = 99 bits (238), Expect = 4e-21
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +1
Query: 82 EIMSTESPLSTSTAFCARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFNTI 261
++ +T S + FC+ CGS+LPL +V C C + ++ + ++ F+ +
Sbjct: 5 DLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRDFEGKVVKTSVVFHQL 64
Query: 262 SVITNENILHTDGPE--GPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKE 435
++ +GPE GPVV+R+C +CG++ M+Y T Q+RSADEGQTVFYTC CK++E
Sbjct: 65 GTAMPMSV--EEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKFQE 122
Query: 436 TENS 447
E+S
Sbjct: 123 KEDS 126
>BC050608-1|AAH50608.1| 126|Homo sapiens zinc ribbon domain
containing 1 protein.
Length = 126
Score = 99 bits (238), Expect = 4e-21
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +1
Query: 82 EIMSTESPLSTSTAFCARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFNTI 261
++ +T S + FC+ CGS+LPL +V C C + ++ + ++ F+ +
Sbjct: 5 DLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRDFEGKVVKTSVVFHQL 64
Query: 262 SVITNENILHTDGPE--GPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKE 435
++ +GPE GPVV+R+C +CG++ M+Y T Q+RSADEGQTVFYTC CK++E
Sbjct: 65 GTAMPMSV--EEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKFQE 122
Query: 436 TENS 447
E+S
Sbjct: 123 KEDS 126
>BC010898-1|AAH10898.1| 126|Homo sapiens zinc ribbon domain
containing 1 protein.
Length = 126
Score = 99 bits (238), Expect = 4e-21
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +1
Query: 82 EIMSTESPLSTSTAFCARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFNTI 261
++ +T S + FC+ CGS+LPL +V C C + ++ + ++ F+ +
Sbjct: 5 DLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRDFEGKVVKTSVVFHQL 64
Query: 262 SVITNENILHTDGPE--GPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKE 435
++ +GPE GPVV+R+C +CG++ M+Y T Q+RSADEGQTVFYTC CK++E
Sbjct: 65 GTAMPMSV--EEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKFQE 122
Query: 436 TENS 447
E+S
Sbjct: 123 KEDS 126
>AL845439-2|CAI18538.1| 126|Homo sapiens zinc ribbon domain
containing 1 protein.
Length = 126
Score = 99 bits (238), Expect = 4e-21
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +1
Query: 82 EIMSTESPLSTSTAFCARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFNTI 261
++ +T S + FC+ CGS+LPL +V C C + ++ + ++ F+ +
Sbjct: 5 DLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRDFEGKVVKTSVVFHQL 64
Query: 262 SVITNENILHTDGPE--GPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKE 435
++ +GPE GPVV+R+C +CG++ M+Y T Q+RSADEGQTVFYTC CK++E
Sbjct: 65 GTAMPMSV--EEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKFQE 122
Query: 436 TENS 447
E+S
Sbjct: 123 KEDS 126
>AL671859-2|CAI17577.1| 126|Homo sapiens zinc ribbon domain
containing 1 protein.
Length = 126
Score = 99 bits (238), Expect = 4e-21
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +1
Query: 82 EIMSTESPLSTSTAFCARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFNTI 261
++ +T S + FC+ CGS+LPL +V C C + ++ + ++ F+ +
Sbjct: 5 DLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRDFEGKVVKTSVVFHQL 64
Query: 262 SVITNENILHTDGPE--GPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKE 435
++ +GPE GPVV+R+C +CG++ M+Y T Q+RSADEGQTVFYTC CK++E
Sbjct: 65 GTAMPMSV--EEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKFQE 122
Query: 436 TENS 447
E+S
Sbjct: 123 KEDS 126
>AL669914-2|CAI18176.1| 126|Homo sapiens zinc ribbon domain
containing 1 protein.
Length = 126
Score = 99 bits (238), Expect = 4e-21
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +1
Query: 82 EIMSTESPLSTSTAFCARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFNTI 261
++ +T S + FC+ CGS+LPL +V C C + ++ + ++ F+ +
Sbjct: 5 DLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRDFEGKVVKTSVVFHQL 64
Query: 262 SVITNENILHTDGPE--GPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKE 435
++ +GPE GPVV+R+C +CG++ M+Y T Q+RSADEGQTVFYTC CK++E
Sbjct: 65 GTAMPMSV--EEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKFQE 122
Query: 436 TENS 447
E+S
Sbjct: 123 KEDS 126
>AF230338-1|AAG50160.1| 126|Homo sapiens nuclear RNA polymerase I
small specific subunit Rpa12 protein.
Length = 126
Score = 99 bits (238), Expect = 4e-21
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +1
Query: 82 EIMSTESPLSTSTAFCARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFNTI 261
++ +T S + FC+ CGS+LPL +V C C + ++ + ++ F+ +
Sbjct: 5 DLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRDFEGKVVKTSVVFHQL 64
Query: 262 SVITNENILHTDGPE--GPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKE 435
++ +GPE GPVV+R+C +CG++ M+Y T Q+RSADEGQTVFYTC CK++E
Sbjct: 65 GTAMPMSV--EEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKFQE 122
Query: 436 TENS 447
E+S
Sbjct: 123 KEDS 126
>AF230337-1|AAG50159.1| 126|Homo sapiens nuclear RNA polymerase I
small specific subunit Rpa12 protein.
Length = 126
Score = 99 bits (238), Expect = 4e-21
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +1
Query: 82 EIMSTESPLSTSTAFCARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFNTI 261
++ +T S + FC+ CGS+LPL +V C C + ++ + ++ F+ +
Sbjct: 5 DLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRDFEGKVVKTSVVFHQL 64
Query: 262 SVITNENILHTDGPE--GPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKE 435
++ +GPE GPVV+R+C +CG++ M+Y T Q+RSADEGQTVFYTC CK++E
Sbjct: 65 GTAMPMSV--EEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKFQE 122
Query: 436 TENS 447
E+S
Sbjct: 123 KEDS 126
>AF024617-1|AAF40469.1| 126|Homo sapiens transcription-associated
zinc ribbon protein protein.
Length = 126
Score = 99 bits (238), Expect = 4e-21
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +1
Query: 82 EIMSTESPLSTSTAFCARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFNTI 261
++ +T S + FC+ CGS+LPL +V C C + ++ + ++ F+ +
Sbjct: 5 DLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRDFEGKVVKTSVVFHQL 64
Query: 262 SVITNENILHTDGPE--GPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKE 435
++ +GPE GPVV+R+C +CG++ M+Y T Q+RSADEGQTVFYTC CK++E
Sbjct: 65 GTAMPMSV--EEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKFQE 122
Query: 436 TENS 447
E+S
Sbjct: 123 KEDS 126
>AB202082-1|BAE78600.1| 126|Homo sapiens zinc ribbon domain
containing, 1 protein.
Length = 126
Score = 99 bits (238), Expect = 4e-21
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +1
Query: 82 EIMSTESPLSTSTAFCARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFNTI 261
++ +T S + FC+ CGS+LPL +V C C + ++ + ++ F+ +
Sbjct: 5 DLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRDFEGKVVKTSVVFHQL 64
Query: 262 SVITNENILHTDGPE--GPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKE 435
++ +GPE GPVV+R+C +CG++ M+Y T Q+RSADEGQTVFYTC CK++E
Sbjct: 65 GTAMPMSV--EEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKFQE 122
Query: 436 TENS 447
E+S
Sbjct: 123 KEDS 126
>Z69719-2|CAI95605.1| 108|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide K, 12.3 kDa protein.
Length = 108
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTC 414
C KC + R + LQ RSADE T FY C
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKC 97
>DQ431198-2|ABD95903.1| 108|Homo sapiens DNA-directed RNA
polymerases III 12.5 kDa polypeptide protein.
Length = 108
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTC 414
C KC + R + LQ RSADE T FY C
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKC 97
>BC011932-1|AAH11932.1| 108|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide K, 12.3 kDa protein.
Length = 108
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTC 414
C KC + R + LQ RSADE T FY C
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKC 97
>AF126531-1|AAD31424.1| 108|Homo sapiens putative DNA-directed RNA
polymerase III C11 subunit protein.
Length = 108
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTC 414
C KC + R + LQ RSADE T FY C
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKC 97
>AF060223-1|AAG43123.1| 108|Homo sapiens My010 protein protein.
Length = 108
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTC 414
C KC + R + LQ RSADE T FY C
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKC 97
>AF051316-1|AAF18268.1| 108|Homo sapiens RNA polymerase III subunit
protein.
Length = 108
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTC 414
C KC + R + LQ RSADE T FY C
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKC 97
>AE006462-2|AAK61210.1| 108|Homo sapiens RNA polymerase III subunit
CII protein.
Length = 108
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTC 414
C KC + R + LQ RSADE T FY C
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKC 97
>X62585-1|CAA44470.1| 301|Homo sapiens transcription elongation
factor protein.
Length = 301
Score = 35.1 bits (77), Expect = 0.12
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
C KC +Y +Q RSADE T F C +C
Sbjct: 263 CGKCKKKNCTYTQVQTRSADEPMTTFVVCNEC 294
>X57198-1|CAA40484.1| 280|Homo sapiens transcription elongation
factor protein.
Length = 280
Score = 35.1 bits (77), Expect = 0.12
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
C KC +Y +Q RSADE T F C +C
Sbjct: 242 CGKCKKKNCTYTQVQTRSADEPMTTFVVCNEC 273
>M81601-1|AAA61138.1| 301|Homo sapiens transcription elongation
factor SII protein.
Length = 301
Score = 35.1 bits (77), Expect = 0.12
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
C KC +Y +Q RSADE T F C +C
Sbjct: 263 CGKCKKKNCTYTQVQTRSADEPMTTFVVCNEC 294
>CR542221-1|CAG47017.1| 301|Homo sapiens TCEA1 protein.
Length = 301
Score = 35.1 bits (77), Expect = 0.12
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
C KC +Y +Q RSADE T F C +C
Sbjct: 263 CGKCKKKNCTYTQVQTRSADEPMTTFVVCNEC 294
>BT019995-1|AAV38798.1| 301|Homo sapiens transcription elongation
factor A (SII), 1 protein.
Length = 301
Score = 35.1 bits (77), Expect = 0.12
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
C KC +Y +Q RSADE T F C +C
Sbjct: 263 CGKCKKKNCTYTQVQTRSADEPMTTFVVCNEC 294
>BC072460-1|AAH72460.1| 301|Homo sapiens transcription elongation
factor A (SII), 1 protein.
Length = 301
Score = 35.1 bits (77), Expect = 0.12
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
C KC +Y +Q RSADE T F C +C
Sbjct: 263 CGKCKKKNCTYTQVQTRSADEPMTTFVVCNEC 294
>BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 34.7 bits (76), Expect = 0.16
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 325 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
+C+KC +Y +Q RSADE T F C +C
Sbjct: 309 QCSKCKKKNCTYNQVQTRSADEPMTTFVLCNEC 341
>AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 34.7 bits (76), Expect = 0.16
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 325 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
+C+KC +Y +Q RSADE T F C +C
Sbjct: 309 QCSKCKKKNCTYNQVQTRSADEPMTTFVLCNEC 341
>AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 34.7 bits (76), Expect = 0.16
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 325 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
+C+KC +Y +Q RSADE T F C +C
Sbjct: 309 QCSKCKKKNCTYNQVQTRSADEPMTTFVLCNEC 341
>AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongation
factor TFIIS.h protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.16
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 325 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
+C+KC +Y +Q RSADE T F C +C
Sbjct: 281 QCSKCKKKNCTYNQVQTRSADEPMTTFVLCNEC 313
>X73534-1|CAA51940.1| 301|Homo sapiens transcription elongation
factor protein.
Length = 301
Score = 34.3 bits (75), Expect = 0.22
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
C KC +Y +Q RSADE T F C +C
Sbjct: 263 CGKCKKKNCTYTQVQTRSADEPVTTFVVCNEC 294
>AK097798-1|BAC05174.1| 404|Homo sapiens protein ( Homo sapiens
cDNA FLJ40479 fis, clone TESTI2043282, moderately
similar to ZINC FINGER PROTEIN 43. ).
Length = 404
Score = 34.3 bits (75), Expect = 0.22
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 250 FNTISVITNENILHTDGPEGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKY 429
FN S++T I+HT E P KC +CG S +TL A + Y C +C
Sbjct: 50 FNRSSILTKHKIIHTG--EKPY---KCEECGKGFSSVSTLNTHKAIHAEEKPYKCEECG- 103
Query: 430 KETENS*RLL 459
K + +S +L+
Sbjct: 104 KASNSSSKLM 113
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +1
Query: 250 FNTISVITNENILHTDGPEGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKY 429
FN S++T I+HT E P KC CG +TL A + Y C +C
Sbjct: 162 FNRSSILTKHKIIHTG--EKPY---KCEGCGKAFSKVSTLNTHKAIHAEEKPYKCEECG- 215
Query: 430 KETENS*RLL 459
K + +S +L+
Sbjct: 216 KASNSSSKLM 225
>D50495-1|BAA09089.1| 299|Homo sapiens transcription elongation
factor S-II, hS-II-T1 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.29
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
C KC +Y +Q RS+DE T F C +C
Sbjct: 261 CGKCRKKNCTYTQVQTRSSDEPMTTFVVCNEC 292
>CR456940-1|CAG33221.1| 299|Homo sapiens TCEA2 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.29
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
C KC +Y +Q RS+DE T F C +C
Sbjct: 261 CGKCRKKNCTYTQVQTRSSDEPMTTFVVCNEC 292
>BC018896-1|AAH18896.1| 299|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.29
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
C KC +Y +Q RS+DE T F C +C
Sbjct: 261 CGKCRKKNCTYTQVQTRSSDEPMTTFVVCNEC 292
>AL590548-5|CAD11901.1| 272|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 272
Score = 33.9 bits (74), Expect = 0.29
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
C KC +Y +Q RS+DE T F C +C
Sbjct: 234 CGKCRKKNCTYTQVQTRSSDEPMTTFVVCNEC 265
>AL590548-4|CAD11900.1| 270|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 270
Score = 33.9 bits (74), Expect = 0.29
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
C KC +Y +Q RS+DE T F C +C
Sbjct: 234 CGKCRKKNCTYTQVQTRSSDEPMTTFVVCNEC 265
>AL590548-1|CAI13198.1| 299|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.29
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 328 CAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
C KC +Y +Q RS+DE T F C +C
Sbjct: 261 CGKCRKKNCTYTQVQTRSSDEPMTTFVVCNEC 292
>BC051741-1|AAH51741.1| 78|Homo sapiens ZNRD1 protein protein.
Length = 78
Score = 31.1 bits (67), Expect = 2.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 82 EIMSTESPLSTSTAFCARCGSILPLLQEFGSVKCYTC 192
++ +T S + FC+ CGS+LPL +V C C
Sbjct: 5 DLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRC 41
>Z23102-1|CAA80649.1| 125|Homo sapiens RNA Polymerase II subunit
14.5 kD protein.
Length = 125
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Frame = +1
Query: 94 TESPLSTSTAFCARCGSIL-PLLQEFGSVKCYTCKA---HYEADNYSKMKFQYTIHFNTI 261
T P FC C ++L P + + Y C+ EADN + T + +
Sbjct: 6 TYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDEL 65
Query: 262 SVITNENILHTDGPEGPVVE-RKCAKCGYDRMSYATLQLRSADEGQTVFYTCI--KCKYK 432
+ I + + P P E C KCG+ + A++ ++Y C C ++
Sbjct: 66 TQIIADV---SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHR 122
Query: 433 ETE 441
TE
Sbjct: 123 WTE 125
>BC067794-1|AAH67794.1| 125|Homo sapiens polymerase (RNA) II (DNA
directed) polypeptide I, 14.5kDa protein.
Length = 125
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Frame = +1
Query: 94 TESPLSTSTAFCARCGSIL-PLLQEFGSVKCYTCKA---HYEADNYSKMKFQYTIHFNTI 261
T P FC C ++L P + + Y C+ EADN + T + +
Sbjct: 6 TYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDEL 65
Query: 262 SVITNENILHTDGPEGPVVE-RKCAKCGYDRMSYATLQLRSADEGQTVFYTCI--KCKYK 432
+ I + + P P E C KCG+ + A++ ++Y C C ++
Sbjct: 66 TQIIADV---SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHR 122
Query: 433 ETE 441
TE
Sbjct: 123 WTE 125
>BC017112-1|AAH17112.1| 125|Homo sapiens polymerase (RNA) II (DNA
directed) polypeptide I, 14.5kDa protein.
Length = 125
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Frame = +1
Query: 94 TESPLSTSTAFCARCGSIL-PLLQEFGSVKCYTCKA---HYEADNYSKMKFQYTIHFNTI 261
T P FC C ++L P + + Y C+ EADN + T + +
Sbjct: 6 TYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDEL 65
Query: 262 SVITNENILHTDGPEGPVVE-RKCAKCGYDRMSYATLQLRSADEGQTVFYTCI--KCKYK 432
+ I + + P P E C KCG+ + A++ ++Y C C ++
Sbjct: 66 TQIIADV---SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHR 122
Query: 433 ETE 441
TE
Sbjct: 123 WTE 125
>AD001527-2|AAB51181.1| 125|Homo sapiens HUMAN DNA-DIRECTED RNA
POLYMERASE II 14.5 KD SUBUNIT protein.
Length = 125
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Frame = +1
Query: 94 TESPLSTSTAFCARCGSIL-PLLQEFGSVKCYTCKA---HYEADNYSKMKFQYTIHFNTI 261
T P FC C ++L P + + Y C+ EADN + T + +
Sbjct: 6 TYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDEL 65
Query: 262 SVITNENILHTDGPEGPVVE-RKCAKCGYDRMSYATLQLRSADEGQTVFYTCI--KCKYK 432
+ I + + P P E C KCG+ + A++ ++Y C C ++
Sbjct: 66 TQIIADV---SQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHR 122
Query: 433 ETE 441
TE
Sbjct: 123 WTE 125
>AF011573-1|AAB84385.1| 1029|Homo sapiens zinc finger protein
protein.
Length = 1029
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 247 HFNTISVITNENILHTDGPEGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
HFN IS + N +HT E P KC +CG + ++L + + Y C +C
Sbjct: 378 HFNKISHLINHRRIHTG--EKP---HKCKECGKGFIQRSSLLMHLRNHSGEKPYKCNEC 431
>AC003973-1|AAB94784.1| 1167|Homo sapiens ZNF91L protein.
Length = 1167
Score = 29.5 bits (63), Expect = 6.1
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +1
Query: 127 CARCGSILPLLQEFGS-VKCYTCKAHYEADNYSKMKFQYTIHFNTISVITNENILHTDGP 303
C CG L F K + + Y+ + K +NT S++T ++HT
Sbjct: 819 CEECGKAFSWLSVFSKHKKTHAGEKFYKCEACGKA-------YNTFSILTKHKVIHTG-- 869
Query: 304 EGPVVERKCAKCGYD-RMSYATLQLRSADEGQTVFYTCIKC 423
E P KC +CG S ++ + G+T Y C +C
Sbjct: 870 EKPY---KCEECGKAFNWSSNLMEHKKIHTGETP-YKCEEC 906
Score = 29.1 bits (62), Expect = 8.1
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +1
Query: 250 FNTISVITNENILHTDGPEGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
FN +++T I+HT E P KC +CG +TL A Y C +C
Sbjct: 266 FNQSAILTKHKIIHTG--EKP---NKCEECGKAFSKVSTLTTHKAIHAGEKPYKCKEC 318
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,519,182
Number of Sequences: 237096
Number of extensions: 1291692
Number of successful extensions: 2739
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 2603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2735
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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