Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_C05
(470 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-3039|AAF55918.1| 120|Drosophila melanogaster CG13418-P... 144 5e-35
AE013599-3053|AAM68394.2| 108|Drosophila melanogaster CG33785-P... 39 0.003
X53670-1|CAA37710.1| 313|Drosophila melanogaster protein ( Dros... 38 0.005
L26091-1|AAA92864.2| 313|Drosophila melanogaster transcription ... 38 0.005
AY051843-1|AAK93267.1| 313|Drosophila melanogaster LD34766p pro... 38 0.005
AE014134-2559|AAF53436.1| 313|Drosophila melanogaster CG3710-PA... 38 0.005
S88139-1|AAB21674.1| 129|Drosophila melanogaster RNA polymerase... 36 0.037
AE014297-1835|AAF55045.1| 129|Drosophila melanogaster CG3284-PA... 36 0.037
S66940-1|AAB29028.2| 129|Drosophila melanogaster RNA polymerase... 33 0.15
BT023902-1|ABA81836.1| 390|Drosophila melanogaster IP14766p pro... 30 1.8
AE014134-2275|AAF53240.2| 2171|Drosophila melanogaster CG9932-PA... 30 1.8
AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p pro... 29 2.4
AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-P... 29 2.4
U36792-1|AAC46928.1| 723|Drosophila melanogaster DHR96 protein. 29 3.2
AY051486-1|AAK92910.1| 723|Drosophila melanogaster GH14435p pro... 29 3.2
AE014297-3687|AAF56379.1| 723|Drosophila melanogaster CG11783-P... 29 3.2
AY084120-1|AAL89858.1| 148|Drosophila melanogaster RE19849p pro... 29 4.2
AE014296-3291|AAF49057.1| 352|Drosophila melanogaster CG6996-PA... 29 4.2
AE014134-3309|AAN11094.1| 148|Drosophila melanogaster CG31675-P... 29 4.2
>AE014297-3039|AAF55918.1| 120|Drosophila melanogaster CG13418-PA
protein.
Length = 120
Score = 144 bits (349), Expect = 5e-35
Identities = 68/116 (58%), Positives = 83/116 (71%), Gaps = 3/116 (2%)
Frame = +1
Query: 109 STSTAFCARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFNTI--SVITNEN 282
S FC CGSILP LQ G+V CY CK ++ D YS K ++TIHFNT S + N
Sbjct: 5 SNCPGFCPSCGSILPELQVKGNVICYNCKKEFQPDVYSGEKSEFTIHFNTYDPSKVFNRT 64
Query: 283 ILHTDGP-EGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKETENS 447
++ +GPVVERKC KC +D+MSYATLQLRSADEGQTVF+TC+KCK+KE+ENS
Sbjct: 65 KRESESDADGPVVERKCPKCNHDKMSYATLQLRSADEGQTVFFTCLKCKFKESENS 120
>AE013599-3053|AAM68394.2| 108|Drosophila melanogaster CG33785-PA,
isoform A protein.
Length = 108
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +1
Query: 124 FCARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQY-TIHFNTISVITNENILHTDG 300
FC CG+IL +++E + +TC SK++ + T F + + +
Sbjct: 4 FCPSCGNIL-IIEEDTNCHRFTCNT---CPYISKIRRKISTKTFPRLKEVDHVLGGKAAW 59
Query: 301 PEGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTC 414
+ +C CG+ R + +Q RSADE T FY C
Sbjct: 60 ENVDSTDAECPTCGHKRAYFMQIQTRSADEPMTTFYKC 97
>X53670-1|CAA37710.1| 313|Drosophila melanogaster protein (
Drosophila gene forRNA polymerase II elongation factor
DmS-II. ).
Length = 313
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 325 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
KCAKC +Y LQ RSADE T F C +C
Sbjct: 274 KCAKCKKRNCTYNQLQTRSADEPMTTFVMCNEC 306
>L26091-1|AAA92864.2| 313|Drosophila melanogaster transcription
elongation factor protein.
Length = 313
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 325 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
KCAKC +Y LQ RSADE T F C +C
Sbjct: 274 KCAKCKKRNCTYNQLQTRSADEPMTTFVMCNEC 306
>AY051843-1|AAK93267.1| 313|Drosophila melanogaster LD34766p
protein.
Length = 313
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 325 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
KCAKC +Y LQ RSADE T F C +C
Sbjct: 274 KCAKCKKRNCTYNQLQTRSADEPMTTFVMCNEC 306
>AE014134-2559|AAF53436.1| 313|Drosophila melanogaster CG3710-PA
protein.
Length = 313
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 325 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 423
KCAKC +Y LQ RSADE T F C +C
Sbjct: 274 KCAKCKKRNCTYNQLQTRSADEPMTTFVMCNEC 306
>S88139-1|AAB21674.1| 129|Drosophila melanogaster RNA polymerase II
15-kda subunit protein.
Length = 129
Score = 35.5 bits (78), Expect = 0.037
Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 5/121 (4%)
Frame = +1
Query: 94 TESPLSTSTAFCARCGSIL-PLLQEFGSVKCYTCK-AHYEADNYSKMKFQYTIHFNTISV 267
TE P FC C ++L P + + Y C+ Y+ S + I + I
Sbjct: 10 TEGPGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYKQKTNSNCIYVNKI-MHEIDE 68
Query: 268 ITNENILHTDGPEGPVVE-RKCAKCGYDRMSYATLQLRSADEGQTVFYTCI--KCKYKET 438
+T+ P P E C KC + + Q R A+E ++Y C C ++ T
Sbjct: 69 LTHIVPDVISDPTLPRTEDHACPKCSHREAVFFKAQTRRAEEEMRLYYVCTNQNCTHRWT 128
Query: 439 E 441
E
Sbjct: 129 E 129
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 289 HTDGPEGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKETENS 447
HT+GP G V R C +C + M Y + E + + Y C C YK+ NS
Sbjct: 9 HTEGP-GFVGIRFCQEC--NNMLYP----KEDKENKILLYACRNCDYKQKTNS 54
>AE014297-1835|AAF55045.1| 129|Drosophila melanogaster CG3284-PA
protein.
Length = 129
Score = 35.5 bits (78), Expect = 0.037
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 5/121 (4%)
Frame = +1
Query: 94 TESPLSTSTAFCARCGSIL-PLLQEFGSVKCYTCK-AHYEADNYSKMKFQYTIHFNTISV 267
TE P FC C ++L P + + Y C+ Y+ + S + I + I
Sbjct: 10 TEGPGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKI-MHEIDE 68
Query: 268 ITNENILHTDGPEGPVVE-RKCAKCGYDRMSYATLQLRSADEGQTVFYTCI--KCKYKET 438
+T+ P P E C KC + + Q R A+E ++Y C C ++ T
Sbjct: 69 LTHIVPDVISDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWT 128
Query: 439 E 441
E
Sbjct: 129 E 129
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 289 HTDGPEGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKETENS 447
HT+GP G V R C +C + M Y + E + + Y C C YK+ +S
Sbjct: 9 HTEGP-GFVGIRFCQEC--NNMLYP----KEDKENKILLYACRNCDYKQEADS 54
>S66940-1|AAB29028.2| 129|Drosophila melanogaster RNA polymerase II
subunit 9 protein.
Length = 129
Score = 33.5 bits (73), Expect = 0.15
Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 5/121 (4%)
Frame = +1
Query: 94 TESPLSTSTAFCARCGSIL-PLLQEFGSVKCYTCK-AHYEADNYSKMKFQYTIHFNTISV 267
TE P FC C ++L P + + Y C+ Y+ + S + I + I
Sbjct: 10 TEGPGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKI-MHEIDE 68
Query: 268 ITNENILHTDGPEGPVVE-RKCAKCGYDRMSYATLQLRSADEGQTVFYTCI--KCKYKET 438
+T+ P P E C KC + Q R A+E ++Y C C ++ T
Sbjct: 69 LTHIVPDVISDPTLPRTEDHACPKCSHREAVSFQAQTRRAEEEMRLYYVCTNQNCTHRWT 128
Query: 439 E 441
E
Sbjct: 129 E 129
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 289 HTDGPEGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKETENS 447
HT+GP G V R C +C + M Y + E + + Y C C YK+ +S
Sbjct: 9 HTEGP-GFVGIRFCQEC--NNMLYP----KEDKENKILLYACRNCDYKQEADS 54
>BT023902-1|ABA81836.1| 390|Drosophila melanogaster IP14766p
protein.
Length = 390
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +1
Query: 325 KCAKCGYDRMSYATLQLRS---ADEGQTVFYTCIKCKY 429
KC+ C + + Y T QLR+ A+ G+T F+ C KC Y
Sbjct: 208 KCSACEFTTL-YRT-QLRAHELAEHGKTKFFRCDKCSY 243
>AE014134-2275|AAF53240.2| 2171|Drosophila melanogaster CG9932-PA
protein.
Length = 2171
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +1
Query: 325 KCAKCGYDRMSYATLQLRS---ADEGQTVFYTCIKCKY 429
KC+ C + + Y T QLR+ A+ G+T F+ C KC Y
Sbjct: 309 KCSACEFTTL-YRT-QLRAHELAEHGKTKFFRCDKCSY 344
>AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p
protein.
Length = 664
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +1
Query: 247 HFNT-ISVITNENILHTDGPEGPVVERKCAKCG---YDRMSYATLQLRSADEGQTVFYTC 414
HF + + + ++ LH P+GPV E +C CG D S R D Y C
Sbjct: 453 HFRSKANFLIHKKALH---PDGPVAEVQCTLCGRWLRDERSLRKHLARHDDRDGDTKYRC 509
Query: 415 IKCKYKETENS 447
+ C +++ +
Sbjct: 510 LLCNAEKSSRA 520
>AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-PA
protein.
Length = 664
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +1
Query: 247 HFNT-ISVITNENILHTDGPEGPVVERKCAKCG---YDRMSYATLQLRSADEGQTVFYTC 414
HF + + + ++ LH P+GPV E +C CG D S R D Y C
Sbjct: 453 HFRSKANFLIHKKALH---PDGPVAEVQCTLCGRWLRDERSLRKHLARHDDRDGDTKYRC 509
Query: 415 IKCKYKETENS 447
+ C +++ +
Sbjct: 510 LLCNAEKSSRA 520
>U36792-1|AAC46928.1| 723|Drosophila melanogaster DHR96 protein.
Length = 723
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 127 CARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFN-TISVIT 273
CA CG L F +V C +CKA + + +K +F + N I+V+T
Sbjct: 7 CAVCGD-KALGYNFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVT 55
>AY051486-1|AAK92910.1| 723|Drosophila melanogaster GH14435p
protein.
Length = 723
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 127 CARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFN-TISVIT 273
CA CG L F +V C +CKA + + +K +F + N I+V+T
Sbjct: 7 CAVCGD-KALGYNFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVT 55
>AE014297-3687|AAF56379.1| 723|Drosophila melanogaster CG11783-PA
protein.
Length = 723
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 127 CARCGSILPLLQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFN-TISVIT 273
CA CG L F +V C +CKA + + +K +F + N I+V+T
Sbjct: 7 CAVCGD-KALGYNFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVT 55
>AY084120-1|AAL89858.1| 148|Drosophila melanogaster RE19849p
protein.
Length = 148
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 139 GSILPLLQEFGSVKCYTCKAHYEA 210
G+++ LL ++KCY C++ YEA
Sbjct: 9 GALISLLASAYAIKCYACESVYEA 32
>AE014296-3291|AAF49057.1| 352|Drosophila melanogaster CG6996-PA
protein.
Length = 352
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +1
Query: 286 LHTDGPEGPVVERKCAKCGYDR---MSYATLQL-RSADEGQTVFYTC 414
L TDG G V R KCGYDR + +T+QL +D+G + C
Sbjct: 241 LATDG--GACVPRSKVKCGYDRCVGLGNSTIQLANESDDGCRGYSIC 285
>AE014134-3309|AAN11094.1| 148|Drosophila melanogaster CG31675-PA
protein.
Length = 148
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 139 GSILPLLQEFGSVKCYTCKAHYEA 210
G+++ LL ++KCY C++ YEA
Sbjct: 9 GALISLLASAYAIKCYACESVYEA 32
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,748,222
Number of Sequences: 53049
Number of extensions: 391074
Number of successful extensions: 932
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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