Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_B20
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   0.68 
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    27   0.68 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   2.1  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   6.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   6.3  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.4  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 651  EMSLIEASLVIVSLAMEFLYLTMVPV*VLERLKIVLDLSEL-NQGNV 514
            E+S  + SLV +SL +  L     P+ +L+ +   LDLS   N GN+
Sbjct: 1082 ELSGGQRSLVALSLILAMLKYKPAPLYILDEVDAALDLSHTQNIGNM 1128


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +3

Query: 402 RKKWKSLRDNYMRYKKEVAGTTGQAAKKFQK--WPWASQLHFLDSTLTDRARSSNVR 566
           +K + S+  +Y+    ++    G   K  Q     W++ LH  D  +  R+RS N+R
Sbjct: 608 KKAYDSVPHSYLLKVLQLYKVDGNVIKLMQHAMGMWSTSLHVTDGKVVLRSRSLNIR 664


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 552 SSNVREPTPEPSSDIETPSPEIQLL 626
           ++   +P  EP +   TP+PE++LL
Sbjct: 96  ATGASKPIAEPKAASATPAPELELL 120


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 531 TLTDRARSSNVREPTPEPSSDIETPSPEIQLLETPQSETS 650
           T +D +   +   P+P    DI +PS     + TP + +S
Sbjct: 256 TDSDCSTQDSTSAPSPATYGDIASPSSASSAMTTPATTSS 295


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 531 TLTDRARSSNVREPTPEPSSDIETPSPEIQLLETPQSETS 650
           T +D +   +   P+P    DI +PS     + TP + +S
Sbjct: 256 TDSDCSTQDSTSAPSPATYGDIASPSSASSAMTTPATTSS 295


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 333 WCESPVAKYLKQIQLDYFTGESARKKWKSLRD 428
           W E  + KYLK + L     E  + + K LRD
Sbjct: 892 WIEL-IEKYLKPLDLSEKQKEEMKSQLKGLRD 922


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,863
Number of Sequences: 2352
Number of extensions: 13334
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)