Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_B14
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 194 7e-51
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 72 8e-14
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 72 8e-14
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 71 1e-13
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 68 1e-12
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 67 2e-12
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 64 2e-11
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 52 5e-08
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 48 9e-07
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 47 2e-06
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 47 2e-06
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 42 6e-05
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 41 2e-04
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 38 0.002
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 36 0.005
SPBP8B7.22 |erd2||HDEL receptor|Schizosaccharomyces pombe|chr 2|... 29 0.59
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 29 0.59
SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces pomb... 27 3.1
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 27 3.1
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 27 3.1
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 26 5.5
SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein L10... 26 5.5
SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein Vps1|Schizo... 25 7.2
SPMIT.06 |||mitochondrial DNA binding endonuclease|Schizosacchar... 25 7.2
SPCC613.01 ||SPCC757.14|membrane transporter|Schizosaccharomyces... 25 9.5
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 9.5
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 25 9.5
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 194 bits (474), Expect = 7e-51
Identities = 90/141 (63%), Positives = 104/141 (73%)
Frame = +3
Query: 231 QSQCANVRNTTVLSGLTPLSIILKRHYAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAIT 410
+ C + + SGL + R YA++++F R KPH N+GTIGHVDHGKTTLTAAIT
Sbjct: 15 RKNCLRLNRISFASGLINRFTVPARTYADEKVFVRKKPHVNIGTIGHVDHGKTTLTAAIT 74
Query: 411 KVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMI 590
K LSDL A Y+ ID APEEKARGITI+ AHVEY+T RHY H DCPGHADYIKNMI
Sbjct: 75 KCLSDLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMI 134
Query: 591 TGTAQMDGAILVVAATDGVMP 653
TG A MDGAI+VV+ATDG MP
Sbjct: 135 TGAATMDGAIIVVSATDGQMP 155
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 71.7 bits (168), Expect = 8e-14
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 15/119 (12%)
Frame = +3
Query: 333 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 467
+ K H NV IGHVD GK+T T + K ++L K +D
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62
Query: 468 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 644
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D AIL++ G
Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTG 121
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 71.7 bits (168), Expect = 8e-14
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 15/119 (12%)
Frame = +3
Query: 333 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 467
+ K H NV IGHVD GK+T T + K ++L K +D
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62
Query: 468 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 644
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D AIL++ G
Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTG 121
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 71.3 bits (167), Expect = 1e-13
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 15/119 (12%)
Frame = +3
Query: 333 RTKPHCNVGTIGHVDHGKTTLTAAIT---------------KVLSDLNLAQKKGYADIDN 467
+ K H NV IGHVD GK+T T + K ++L K +D
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62
Query: 468 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 644
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L++ G
Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTG 121
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 67.7 bits (158), Expect = 1e-12
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Frame = +3
Query: 339 KPHCNVGTIGHVDHGKTTLTAAIT------------KVLSDLNLAQKKGYA---DIDNAP 473
K H N+ IGHVD GK+TL I K+ + A K+ + +D+
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 474 EEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDG 644
EE+ +G T+ V ++TE R + D PGH Y+ NMI G +Q D +LV++A G
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRG 352
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 67.3 bits (157), Expect = 2e-12
Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 17/120 (14%)
Frame = +3
Query: 321 QIFERT--KPHCNVGTIGHVDHGKTTLTAAITKVLSDLN--LAQK---------KG---Y 452
+IFE++ KP ++ GHVD GK+T+ I L ++N QK KG Y
Sbjct: 167 EIFEQSNPKPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSY 226
Query: 453 A-DIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVV 629
A +D EE+ARG+T++VA ++++++ Y D PGH D+I MI G + D A+LVV
Sbjct: 227 AWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVV 286
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 63.7 bits (148), Expect = 2e-11
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +3
Query: 351 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYAD-----IDNAPEEKARGITINVAHV 515
NVG I H+D GKTTLT K+L G D +D P E+ RGITIN A +
Sbjct: 30 NVGIIAHIDAGKTTLTE---KMLYYGGFTSHFGNVDTGDTVMDYLPAERQRGITINSAAI 86
Query: 516 EYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV 647
+ + D PGHAD+ + A +DGA+ ++ + GV
Sbjct: 87 SFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAGV 130
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 52.4 bits (120), Expect = 5e-08
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Frame = +3
Query: 351 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINV---AHVEY 521
N I H+DHGK+TL+ I K+ +N + +D E+ RGIT+ + + Y
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNFRNQF-LDKLEVERRRGITVKAQTCSMIYY 118
Query: 522 QTEQRH-YGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV 647
Q + D PGH D+ ++ A +G IL+V A+ G+
Sbjct: 119 YHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQGI 161
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 48.4 bits (110), Expect = 9e-07
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 22/119 (18%)
Frame = +3
Query: 351 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYAD--IDNAPEEKA------ 485
N+GTIGHV HGK+T+ AI+ V + + N+ K GYA+ I E+
Sbjct: 25 NIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKCSNEECPRPGCY 84
Query: 486 RGITINVA-HVEYQTEQ------RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATD 641
R + N H + RH DCPGH + M+ G A MD A+L++A +
Sbjct: 85 RSYSSNKEDHPPCEICNSPMNLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNE 143
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 47.2 bits (107), Expect = 2e-06
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 16/115 (13%)
Frame = +3
Query: 351 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 530
N+ I HVDHGK+TLT ++ + ++ A+ +D +E+ RG+TI + E
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAISLFAE 80
Query: 531 QRH----------------YGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV 647
D PGH D+ + DGA++VV +GV
Sbjct: 81 MTDDDMKDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGV 135
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 47.2 bits (107), Expect = 2e-06
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 16/115 (13%)
Frame = +3
Query: 351 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 530
N+ I HVDHGK+TLT ++ + ++ A+ +D +E+ RG+TI + E
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAISLFAE 80
Query: 531 QRH----------------YGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV 647
D PGH D+ + DGA++VV +GV
Sbjct: 81 MTDDDMKDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGV 135
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 42.3 bits (95), Expect = 6e-05
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Frame = +3
Query: 171 MASITFVKSLVSPAVKL-VLKQSQCANVRNTTVLSGLTPLSIILKRHYAEKQIFERTKPH 347
M ++F +SL S +L L A+V NT + + T + + + +R K
Sbjct: 1 MLKLSF-RSLTSRLPRLSTLVVRGYASVANTGIEASNTSENNLNIQEQLNDNDKKRLKQI 59
Query: 348 CNVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGY--ADIDNAPEEKARGITI---- 500
N+G H+D GKTT T + T + D++ + K A +D E+ +GITI
Sbjct: 60 RNIGISAHIDSGKTTFTERVLYYTGRIKDIHEVRGKDNVGAKMDFMELEREKGITIQSAA 119
Query: 501 -------NVAHVEYQTEQR-------HYGHTDCPGHADYIKNMITGTAQMDGAILVVAAT 638
V +E +Q+ + D PGH D+ + +DGA+LV+ A
Sbjct: 120 THCTWERTVDQIEANEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAV 179
Query: 639 DGV 647
GV
Sbjct: 180 SGV 182
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 40.7 bits (91), Expect = 2e-04
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 12/111 (10%)
Frame = +3
Query: 351 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEY--- 521
N + HVDHGKTTL ++ ++ +D +E RGIT+ + +
Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMKSSAISLFFK 80
Query: 522 ---QTEQRHYGHT------DCPGHADYIKNMITGTAQMDGAILVVAATDGV 647
Q +++ D PGH D+ + + + DGA ++V A +GV
Sbjct: 81 VISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGV 131
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 37.5 bits (83), Expect = 0.002
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Frame = +3
Query: 366 GHVDHGKTTLTAAITKVLS-DLNLAQKKG--YADIDNAPEEKARGIT---INVAHVEYQT 527
GH+ HGK+ L + D +++ Y D E+ I + +A + +
Sbjct: 147 GHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTLAVSDMKG 206
Query: 528 EQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVM 650
+ + D PGH D++ + A DG +LVV +GVM
Sbjct: 207 KTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVM 247
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 35.9 bits (79), Expect = 0.005
Identities = 32/100 (32%), Positives = 40/100 (40%)
Frame = +3
Query: 354 VGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQ 533
V +GHVDHGKTTL A K S + + G +K T V +
Sbjct: 174 VTLMGHVDHGKTTLLDAFRK--STIASTEHGGIT-------QKIGAFT-----VPFDKGS 219
Query: 534 RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP 653
+ D PGH + G D +LVVA DGV P
Sbjct: 220 KFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDGVKP 259
>SPBP8B7.22 |erd2||HDEL receptor|Schizosaccharomyces pombe|chr
2|||Manual
Length = 212
Score = 29.1 bits (62), Expect = 0.59
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = -2
Query: 172 MLNELFNTKRC*ILNFQKFRLIFVWIFYNKYIHLFFRICSTSLYYS*SMAPFILS 8
+L+ + +K C L+ K L+F+ ++ +Y++LF+R SLYY FI S
Sbjct: 19 LLHRMKKSKTCSGLSL-KSHLLFLLVYVTRYLNLFWRY--KSLYYFLMRIVFIAS 70
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 29.1 bits (62), Expect = 0.59
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 37 YNTSSCCKFEKINECTYCKISKQKLIGISENLIFNTA 147
Y+T+S K ++ +YC +S I +E+++ N A
Sbjct: 56 YHTTSVLKHHNVSNTSYCNLSPSLFIKFAEDVLSNLA 92
>SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 378 DQHVRLCQHCNGALYVQRFVFLHN 307
D H+R+ G Y++RFV HN
Sbjct: 475 DYHIRITFLAKGTEYIERFVKAHN 498
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 339 KPHCNVGTIGHVDHGKTTLTAAITKVL 419
KP +G +G GK+TLT A+ +++
Sbjct: 1249 KPQEKIGIVGRTGAGKSTLTLALFRLI 1275
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 552 DCPGHADYIKNMITGTAQ 605
D HADY K MITG A+
Sbjct: 715 DMHSHADYFKEMITGYAK 732
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 25.8 bits (54), Expect = 5.5
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Frame = +3
Query: 363 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNA---PEEKARGITINVAHVEYQTEQ 533
+GHVD GKT L + + S++ + G A P E + T V + + + +
Sbjct: 490 LGHVDTGKTKLLDNLRR--SNVQEGEAGGITQQIGATYFPIESIKQKT-KVVNKKGKLQY 546
Query: 534 RHYGHT--DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP 653
G D PGH + GT+ + AILV+ G+ P
Sbjct: 547 NIPGLLIIDTPGHESFTNLRSRGTSLCNIAILVIDIMHGLEP 588
>SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 327 FERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADI 461
F+ K C +GHVD + L A ++ ++ L KKG+ +I
Sbjct: 156 FQLKKVLCLGVAVGHVDMAEEQLAANLSLAINFLVSLLKKGWQNI 200
>SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein
Vps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 471 PEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMIT 593
PE K R IN A +YQ E G T ++ + N+IT
Sbjct: 311 PEIKVR---INAALAKYQAELHSLGDTPVGDNSSIVLNLIT 348
>SPMIT.06 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 807
Score = 25.4 bits (53), Expect = 7.2
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 393 LTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTEQRHYG 545
+ A IT S + L I N+ +K + N++H + T RH+G
Sbjct: 529 ILAKITCFCSSIGLTVSPTKTKITNSYTDKILFLGTNISHSKNVTFSRHFG 579
>SPCC613.01 ||SPCC757.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 497
Score = 25.0 bits (52), Expect = 9.5
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = -2
Query: 112 LIFVWIFYNKYIHLFFR 62
++F+WI Y+ ++ +FF+
Sbjct: 263 MLFIWIVYSIFLSIFFK 279
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 77 SFIFSNLQHELVL*LIYGTFYFKC 6
+F+FS + E+ L++GT +F C
Sbjct: 1295 AFVFSAIIVEIPFNLVFGTLFFLC 1318
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 507 AHVEYQTEQRHYGHTDCPGHAD 572
AH YQT+ HY T H D
Sbjct: 266 AHPIYQTQHSHYDETPTSHHPD 287
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,622,020
Number of Sequences: 5004
Number of extensions: 53521
Number of successful extensions: 157
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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