Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_B12
         (514 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55CB4 Cluster: PREDICTED: similar to Ets DNA-bi...    55   1e-06
UniRef50_Q16SU2 Cluster: Ets; n=3; Culicidae|Rep: Ets - Aedes ae...    42   0.011
UniRef50_Q29MI7 Cluster: GA16373-PA; n=1; Drosophila pseudoobscu...    34   1.7  
UniRef50_Q01842 Cluster: Ets DNA-binding protein pokkuri; n=4; D...    34   1.7  
UniRef50_Q03QK7 Cluster: Cell wall-associated hydrolase; n=1; La...    34   2.2  
UniRef50_Q7Q4T1 Cluster: ENSANGP00000013136; n=1; Anopheles gamb...    33   5.0  
UniRef50_Q88893 Cluster: RNA1 polyprotein (P1) [Contains: P1A pr...    33   5.0  
UniRef50_A5V039 Cluster: Putative uncharacterized protein; n=2; ...    32   8.8  

>UniRef50_UPI0000D55CB4 Cluster: PREDICTED: similar to Ets
           DNA-binding protein pokkuri (Protein yan) (Protein
           anterior open); n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to Ets DNA-binding protein pokkuri (Protein yan)
           (Protein anterior open) - Tribolium castaneum
          Length = 454

 Score = 54.8 bits (126), Expect = 1e-06
 Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
 Frame = +1

Query: 283 LPSGPSMERL--PLPFSPTELLWRYXXXXXXXXXXX-----LGDTKAQLXXGLPPEPRLX 441
           +P+  SM+RL  PLPFSP  LLWRY                L D K+QL   L  +PR+ 
Sbjct: 11  IPTSTSMDRLALPLPFSPDSLLWRYPLGFASIGAQQPPSSPLLDYKSQLPSNLASDPRVW 70

Query: 442 TXXDVSVFLKWCEKK 486
           +  DV+ FL+W E++
Sbjct: 71  SREDVATFLRWAERE 85


>UniRef50_Q16SU2 Cluster: Ets; n=3; Culicidae|Rep: Ets - Aedes
           aegypti (Yellowfever mosquito)
          Length = 803

 Score = 41.5 bits (93), Expect = 0.011
 Identities = 26/77 (33%), Positives = 38/77 (49%)
 Frame = +1

Query: 256 NVMKVVSLQLPSGPSMERLPLPFSPTELLWRYXXXXXXXXXXXLGDTKAQLXXGLPPEPR 435
           N  K+  L +P  P     PL    ++LLWRY           L D K QL   L  +PR
Sbjct: 61  NNSKMKLLPIPLSPLNPPAPLGIWGSDLLWRYPPAPPSP----LADLKTQLPPQLNTDPR 116

Query: 436 LXTXXDVSVFLKWCEKK 486
           +    +V+VFL++CE++
Sbjct: 117 IWGREEVAVFLRFCERE 133


>UniRef50_Q29MI7 Cluster: GA16373-PA; n=1; Drosophila
           pseudoobscura|Rep: GA16373-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 700

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +1

Query: 385 LGDTKAQLXXGLPPEPRLXTXXDVSVFLKWCEKK 486
           L + K QL   LP +PRL +  DV VFL++C ++
Sbjct: 36  LAELKTQLPPSLPSDPRLWSREDVLVFLRFCVRE 69


>UniRef50_Q01842 Cluster: Ets DNA-binding protein pokkuri; n=4;
           Drosophila|Rep: Ets DNA-binding protein pokkuri -
           Drosophila melanogaster (Fruit fly)
          Length = 732

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +1

Query: 385 LGDTKAQLXXGLPPEPRLXTXXDVSVFLKWCEKK 486
           L + K QL   LP +PRL +  DV VFL++C ++
Sbjct: 36  LAELKTQLPPSLPSDPRLWSREDVLVFLRFCVRE 69


>UniRef50_Q03QK7 Cluster: Cell wall-associated hydrolase; n=1;
           Lactobacillus brevis ATCC 367|Rep: Cell wall-associated
           hydrolase - Lactobacillus brevis (strain ATCC 367 / JCM
           1170)
          Length = 532

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 24/80 (30%), Positives = 33/80 (41%)
 Frame = -2

Query: 240 SGTGCVVKILVENRNWTTQYTYIIITKVSTEFSVHRAPDTRVTAVIPPNVSCYGTP*TSS 61
           + T         + + TTQ +       ST  +      +R T V P N S   T  +SS
Sbjct: 257 TSTAATTSTATSSASQTTQTSQATSANSSTTSNQSVTKQSRATPVAPANESSQSTTRSSS 316

Query: 60  VSEGTNSQASVSNGSSTXDS 1
           VS  + S AS +  SST  S
Sbjct: 317 VSAASQSTASQAVTSSTSQS 336


>UniRef50_Q7Q4T1 Cluster: ENSANGP00000013136; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000013136 - Anopheles gambiae
           str. PEST
          Length = 681

 Score = 32.7 bits (71), Expect = 5.0
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 82  VTRHVWRDHRRYACVWCSVYTEFCANFCDDNV-RVLSCPVSVFNKDFDNATS 234
           +T+  +R   +Y C  CS YTE C     D + R+L   +  FN D +   S
Sbjct: 363 ITQEYFRGDNKYRCEVCSGYTEACRTISFDILPRLLVLQLKRFNGDMEKINS 414


>UniRef50_Q88893 Cluster: RNA1 polyprotein (P1) [Contains: P1A protein
            (1A) (Protease cofactor); Putative ATP-dependent helicase
            (EC 3.6.1.-) (NTP-binding protein) (NTB) (1B)
            (Membrane-binding protein); Viral genome-linked protein
            (1C-VPg); Picornain 3C-like protease (EC 3.4.22.-)
            (3C-like protease) (1D-PRO); RNA-directed RNA polymerase
            (EC 2.7.7.48) (1E-POL)]; n=3; Subgroup A|Rep: RNA1
            polyprotein (P1) [Contains: P1A protein (1A) (Protease
            cofactor); Putative ATP-dependent helicase (EC 3.6.1.-)
            (NTP-binding protein) (NTB) (1B) (Membrane-binding
            protein); Viral genome-linked protein (1C-VPg); Picornain
            3C-like protease (EC 3.4.22.-) (3C-like protease)
            (1D-PRO); RNA-directed RNA polymerase (EC 2.7.7.48)
            (1E-POL)] - Tobacco ringspot virus (strain Bud Blight)
            (TobRV) (TRSV)
          Length = 2304

 Score = 32.7 bits (71), Expect = 5.0
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = -3

Query: 278  KLTTFITLIG*ADPELVALSKSLLKTETGQLSTRTLSSQKL 156
            +  TF+TL+   D  L+A+  S+ K  TG++  +TL+ +K+
Sbjct: 1874 RFETFVTLVVYGDDNLIAVDPSMQKIFTGEVIKKTLARKKI 1914


>UniRef50_A5V039 Cluster: Putative uncharacterized protein; n=2;
           Roseiflexus|Rep: Putative uncharacterized protein -
           Roseiflexus sp. RS-1
          Length = 196

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 276 LTTAVWAQYGAATATIQSNRTIMALP 353
           LT A W  Y AAT T++ N T++ +P
Sbjct: 98  LTEARWGSYSAATGTVRLNATLLRMP 123


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,752,767
Number of Sequences: 1657284
Number of extensions: 7711257
Number of successful extensions: 20479
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20469
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)