Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_B05
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.7  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   6.5  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   8.6  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 225 WVDNRKRWQQYIKAQKPVQSLYNSPRLPRP 314
           W D   R  ++   Q+ +  L+N+ RL RP
Sbjct: 695 WRDVESRDNRFAGKQRNLDELFNAVRLARP 724


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 661 PLLEPA*RGPEPRALRTRSSPVSRSA 584
           PLL    +GPEP+ L T S    R A
Sbjct: 706 PLLIKNLQGPEPKILETYSKLTMRDA 731


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +3

Query: 579  RSADRETGLDRVRSARGSGPRQA 647
            RS  R     R RS  GSG RQA
Sbjct: 1164 RSRSRSRSGSRSRSRSGSGSRQA 1186


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,840
Number of Sequences: 2352
Number of extensions: 14684
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)