Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_B05
(664 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear ... 142 8e-34
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 142 8e-34
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 133 6e-31
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 121 2e-27
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 121 2e-27
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 121 2e-27
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 121 2e-27
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 121 2e-27
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 121 2e-27
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 120 4e-27
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 120 6e-27
AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear r... 109 9e-24
BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protei... 79 2e-14
BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protei... 79 2e-14
AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens ... 79 2e-14
AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein. 79 2e-14
AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG... 76 1e-13
AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protei... 74 4e-13
AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens ... 74 4e-13
AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein. 74 4e-13
AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein. 73 1e-12
BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein. 70 9e-12
BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protei... 67 6e-11
AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protei... 67 6e-11
AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protei... 67 6e-11
X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein. 65 2e-10
BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein. 65 2e-10
BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protei... 65 2e-10
Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein. 64 6e-10
X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein. 64 6e-10
U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein. 64 6e-10
BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protei... 64 6e-10
AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein. 64 6e-10
U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein prot... 53 1e-06
BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein. 53 1e-06
AB209366-1|BAD92603.1| 493|Homo sapiens far upstream element-bi... 53 1e-06
BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein. 51 3e-06
AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG... 51 3e-06
AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG... 51 3e-06
AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protei... 51 3e-06
U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2 pr... 50 1e-05
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 48 2e-05
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 48 2e-05
U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3 pr... 47 5e-05
BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein. 47 5e-05
AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element (F... 47 5e-05
AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element (F... 47 5e-05
AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element (F... 47 5e-05
AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element (F... 47 5e-05
AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing regula... 47 7e-05
BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein. 46 9e-05
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 45 3e-04
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 45 3e-04
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 45 3e-04
U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like RNA-... 44 4e-04
AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nov... 44 4e-04
AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nov... 44 4e-04
AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain co... 43 9e-04
AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain co... 43 9e-04
AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH domain-con... 43 9e-04
AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding pr... 43 9e-04
U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antige... 42 0.001
BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventr... 42 0.001
BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventr... 42 0.001
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 41 0.005
BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein. 41 0.005
BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth fac... 41 0.005
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 41 0.005
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 41 0.005
AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens ... 41 0.005
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 41 0.005
AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding pro... 41 0.005
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 41 0.005
U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding prot... 40 0.008
U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein. 40 0.008
DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding prote... 40 0.008
AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CR... 40 0.008
AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding pro... 40 0.008
BC067878-1|AAH67878.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 39 0.014
BC051703-1|AAH51703.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 39 0.014
AY039237-1|AAK72102.1| 630|Homo sapiens DEAD-box protein CAGE p... 39 0.014
BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 33 0.91
AK001746-1|BAA91878.1| 440|Homo sapiens protein ( Homo sapiens ... 33 0.91
AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein. 33 0.91
AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884... 33 1.2
AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens ... 33 1.2
BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase... 32 1.6
AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated tran... 32 1.6
AY950679-1|AAY34147.1| 659|Homo sapiens MEX3C protein. 31 4.9
AY950677-1|AAY34145.1| 520|Homo sapiens MEX3A protein. 30 6.4
AL132655-8|CAM28316.1| 625|Homo sapiens GNAS complex locus prot... 30 6.4
AK057397-1|BAB71470.1| 142|Homo sapiens protein ( Homo sapiens ... 30 6.4
AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein. 30 8.5
>AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 379
Score = 142 bits (345), Expect = 8e-34
Identities = 77/173 (44%), Positives = 110/173 (63%), Gaps = 2/173 (1%)
Frame = +1
Query: 151 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 324
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 325 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKI 504
LSI+A D ET+ EI+K I+P L E+ + GS D + ++R+LIHQS AG +IG G+KI
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCELRLLIHQSLAGGIIGVKGAKI 143
Query: 505 KELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQVPIKG 663
KELRE T +K+F P S++R+V + GKPD +V ++ +LDL+ + PIKG
Sbjct: 144 KELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKG 196
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 142 bits (345), Expect = 8e-34
Identities = 77/173 (44%), Positives = 110/173 (63%), Gaps = 2/173 (1%)
Frame = +1
Query: 151 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 324
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 30 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 89
Query: 325 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKI 504
LSI+A D ET+ EI+K I+P L E+ + GS D + ++R+LIHQS AG +IG G+KI
Sbjct: 90 LSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCELRLLIHQSLAGGIIGVKGAKI 145
Query: 505 KELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQVPIKG 663
KELRE T +K+F P S++R+V + GKPD +V ++ +LDL+ + PIKG
Sbjct: 146 KELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKG 198
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 133 bits (321), Expect = 6e-31
Identities = 76/173 (43%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Frame = +1
Query: 151 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 324
++ A KR R TD+ E+ L+ SK LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSK-----------NIKALRTDYNASVSVPDSSGPERI 76
Query: 325 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKI 504
LSI+A D ET+ EI+K I+P L E+ + GS D + ++R+LIHQS AG +IG G+KI
Sbjct: 77 LSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCELRLLIHQSLAGGIIGVKGAKI 132
Query: 505 KELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQVPIKG 663
KELRE T +K+F P S++R+V + GKPD +V ++ +LDL+ + PIKG
Sbjct: 133 KELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKG 185
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 121 bits (292), Expect = 2e-27
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 23/194 (11%)
Frame = +1
Query: 151 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 324
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 325 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 441
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGV 621
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 622 REVLDLVRQVPIKG 663
+ +LDL+ + PIKG
Sbjct: 207 KIILDLISESPIKG 220
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 121 bits (292), Expect = 2e-27
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 23/194 (11%)
Frame = +1
Query: 151 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 324
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 325 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 441
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGV 621
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 622 REVLDLVRQVPIKG 663
+ +LDL+ + PIKG
Sbjct: 207 KIILDLISESPIKG 220
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 121 bits (292), Expect = 2e-27
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 23/194 (11%)
Frame = +1
Query: 151 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 324
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 325 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 441
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGV 621
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 622 REVLDLVRQVPIKG 663
+ +LDL+ + PIKG
Sbjct: 207 KIILDLISESPIKG 220
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 121 bits (292), Expect = 2e-27
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 23/194 (11%)
Frame = +1
Query: 151 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 324
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 325 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 441
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGV 621
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 622 REVLDLVRQVPIKG 663
+ +LDL+ + PIKG
Sbjct: 207 KIILDLISESPIKG 220
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 121 bits (292), Expect = 2e-27
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 23/194 (11%)
Frame = +1
Query: 151 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 324
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 325 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 441
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGV 621
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 622 REVLDLVRQVPIKG 663
+ +LDL+ + PIKG
Sbjct: 207 KIILDLISESPIKG 220
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 121 bits (292), Expect = 2e-27
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 23/194 (11%)
Frame = +1
Query: 151 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 324
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 325 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 441
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGV 621
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 622 REVLDLVRQVPIKG 663
+ +LDL+ + PIKG
Sbjct: 207 KIILDLISESPIKG 220
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 120 bits (290), Expect = 4e-27
Identities = 75/188 (39%), Positives = 105/188 (55%), Gaps = 23/188 (12%)
Frame = +1
Query: 169 KRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERVLSITAE 342
KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+LSI+A
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISA- 92
Query: 343 DDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELDVRMLIH 459
D ET+ EI+K I+P L E N + D + ++R+LIH
Sbjct: 93 DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIH 152
Query: 460 QSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDL 639
QS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V ++ +LDL
Sbjct: 153 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDL 212
Query: 640 VRQVPIKG 663
+ + PIKG
Sbjct: 213 ISESPIKG 220
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 120 bits (288), Expect = 6e-27
Identities = 75/194 (38%), Positives = 107/194 (55%), Gaps = 23/194 (11%)
Frame = +1
Query: 151 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 324
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 325 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 441
LSI+ D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSIST-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGV 621
+R+LIHQS AG +IG G+KIKELRE T +K+F P S++R+V + GKPD +V +
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 622 REVLDLVRQVPIKG 663
+ +LDL+ + PIKG
Sbjct: 207 KIILDLISESPIKG 220
>AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 306
Score = 109 bits (262), Expect = 9e-24
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 21/151 (13%)
Frame = +1
Query: 274 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCL--------------------- 390
QY AS++VPD GPER+LSI+A D ET+ EI+K I+P L
Sbjct: 2 QYNASVSVPDSSGPERILSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDA 60
Query: 391 AEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS 570
E N + D + ++R+LIHQS AG +IG G+KIKELRE T +K+F P S+
Sbjct: 61 VECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHST 120
Query: 571 ERIVQLIGKPDSIVSGVREVLDLVRQVPIKG 663
+R+V + GKPD +V ++ +LDL+ + PIKG
Sbjct: 121 DRVVLIGGKPDRVVECIKIILDLISESPIKG 151
>BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 78.6 bits (185), Expect = 2e-14
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 429
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 430 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
+ +R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V + G PD+I
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAI 159
Query: 610 VSGVREVLDLVRQVPIKG 663
+ VR++ ++ + P KG
Sbjct: 160 ILCVRQICAVILESPPKG 177
Score = 51.2 bits (117), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1
Query: 424 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPD 603
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 296
Query: 604 SI 609
SI
Sbjct: 297 SI 298
Score = 46.4 bits (105), Expect = 9e-05
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +RML+H G +IGK G +K +RE++ AR+ I S P ERI + G ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 616 GV 621
V
Sbjct: 75 AV 76
>BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 78.6 bits (185), Expect = 2e-14
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 429
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 430 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
+ +R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V + G PD+I
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAI 159
Query: 610 VSGVREVLDLVRQVPIKG 663
+ VR++ ++ + P KG
Sbjct: 160 ILCVRQICAVILESPPKG 177
Score = 51.2 bits (117), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1
Query: 424 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPD 603
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 296
Query: 604 SI 609
SI
Sbjct: 297 SI 298
Score = 46.4 bits (105), Expect = 9e-05
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +RML+H G +IGK G +K +RE++ AR+ I S P ERI + G ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 616 GV 621
V
Sbjct: 75 AV 76
>AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens
cDNA FLJ13931 fis, clone Y79AA1000752, moderately
similar to PUTATIVE HETEROGENEOUS NUCLEAR
RIBONUCLEOPROTEIN X. ).
Length = 403
Score = 78.6 bits (185), Expect = 2e-14
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 429
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 430 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
+ +R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V + G PD+I
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAI 159
Query: 610 VSGVREVLDLVRQVPIKG 663
+ VR++ ++ + P KG
Sbjct: 160 ILCVRQICAVILESPPKG 177
Score = 51.2 bits (117), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1
Query: 424 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPD 603
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 296
Query: 604 SI 609
SI
Sbjct: 297 SI 298
Score = 46.4 bits (105), Expect = 9e-05
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +RML+H G +IGK G +K +RE++ AR+ I S P ERI + G ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 616 GV 621
V
Sbjct: 75 AV 76
>AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein.
Length = 403
Score = 78.6 bits (185), Expect = 2e-14
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 429
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 430 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
+ +R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V + G PD+I
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAI 159
Query: 610 VSGVREVLDLVRQVPIKG 663
+ VR++ ++ + P KG
Sbjct: 160 ILCVRQICAVILESPPKG 177
Score = 51.2 bits (117), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1
Query: 424 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPD 603
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 296
Query: 604 SI 609
SI
Sbjct: 297 SI 298
Score = 46.4 bits (105), Expect = 9e-05
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +RML+H G +IGK G +K +RE++ AR+ I S P ERI + G ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 616 GV 621
V
Sbjct: 75 AV 76
>AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG10
protein.
Length = 369
Score = 75.8 bits (178), Expect = 1e-13
Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Frame = +1
Query: 274 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 438
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 439 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSG 618
+R++I S+ G +IGKAG+KIKE+RE TGA++++ + P S+ER V + G PD+I+
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 128
Query: 619 VREVLDLVRQVPIKG 663
VR++ ++ + P KG
Sbjct: 129 VRQICAVILESPPKG 143
Score = 51.2 bits (117), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1
Query: 424 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPD 603
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 204 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 262
Query: 604 SI 609
SI
Sbjct: 263 SI 264
>AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protein 3
protein.
Length = 361
Score = 74.1 bits (174), Expect = 4e-13
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 438
+R + A I + + PER+++IT D + N + + +
Sbjct: 39 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Query: 439 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSG 618
+R+++ S+ G +IGK GSKIKE+RE TGA++++ + P S+ER V + G PD+I+
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQC 158
Query: 619 VREVLDLVRQVPIKG 663
V+++ ++ + P KG
Sbjct: 159 VKQICVVMLESPPKG 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERIV + G D+I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP---ERIVTITGPTDAI 68
Score = 47.6 bits (108), Expect = 4e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 472 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
GC+IG+ G+KI E+R+ +GA++KI +N+ SSER + + G P +I
Sbjct: 296 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSERQITITGTPANI 340
>AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
POLY(RC) BINDING PROTEIN 2. ).
Length = 351
Score = 74.1 bits (174), Expect = 4e-13
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 438
+R + A I + + PER+++IT D + N + + +
Sbjct: 71 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Query: 439 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSG 618
+R+++ S+ G +IGK GSKIKE+RE TGA++++ + P S+ER V + G PD+I+
Sbjct: 131 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQC 190
Query: 619 VREVLDLVRQVPIKG 663
V+++ ++ + P KG
Sbjct: 191 VKQICVVMLESPPKG 205
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERIV + G D+I
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP---ERIVTITGPTDAI 100
Score = 47.6 bits (108), Expect = 4e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 472 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
GC+IG+ G+KI E+R+ +GA++KI +N+ SSER + + G P +I
Sbjct: 286 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSERQITITGTPANI 330
>AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein.
Length = 339
Score = 74.1 bits (174), Expect = 4e-13
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 438
+R + A I + + PER+++IT D + N + + +
Sbjct: 39 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Query: 439 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSG 618
+R+++ S+ G +IGK GSKIKE+RE TGA++++ + P S+ER V + G PD+I+
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQC 158
Query: 619 VREVLDLVRQVPIKG 663
V+++ ++ + P KG
Sbjct: 159 VKQICVVMLESPPKG 173
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERIV + G D+I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP---ERIVTITGPTDAI 68
Score = 47.6 bits (108), Expect = 4e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 472 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
GC+IG+ G+KI E+R+ +GA++KI +N+ SSER + + G P +I
Sbjct: 274 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSERQITITGTPANI 318
>AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein.
Length = 397
Score = 72.5 bits (170), Expect = 1e-12
Identities = 44/138 (31%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 429
+R Q A IT+ + ER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSFLERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 430 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
+ +R++I S+ G +IG+AG+KIKE+RE TGA++++ + P S+ER V + G PD+I
Sbjct: 100 PPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQVQVAGDLFPNSTERAVTVSGVPDAI 159
Query: 610 VSGVREVLDLVRQVPIKG 663
+ VR++ ++ + P KG
Sbjct: 160 ILCVRQICAVILESPPKG 177
Score = 51.2 bits (117), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1
Query: 424 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPD 603
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 296
Query: 604 SI 609
SI
Sbjct: 297 SI 298
Score = 41.9 bits (94), Expect = 0.002
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +RML+H G +IGK G +K +RE++ AR+ I S ERI + G ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS---FLERITTITGSTAAVFH 74
Query: 616 GV 621
V
Sbjct: 75 AV 76
>BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein.
Length = 313
Score = 69.7 bits (163), Expect = 9e-12
Identities = 37/124 (29%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 438
+R + A I + + PER+++IT D + N + + +
Sbjct: 39 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Query: 439 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSG 618
+R+++ S+ G +IGK GSKIKE+RE TGA++++ + P S+ER V + G PD+I+
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQC 158
Query: 619 VREV 630
V+++
Sbjct: 159 VKQI 162
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERIV + G D+I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP---ERIVTITGPTDAI 68
Score = 47.6 bits (108), Expect = 4e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 472 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
GC+IG+ G+KI E+R+ +GA++KI +N+ SSER + + G P +I
Sbjct: 248 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSERQITITGTPANI 292
>BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protein 2
protein.
Length = 362
Score = 66.9 bits (156), Expect = 6e-11
Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 435
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P SI+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 157
Query: 616 GVREVLDLVRQVPIKG 663
V+++ ++ + P KG
Sbjct: 158 CVKQICVVMLESPPKG 173
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 616 GVREVLDLVRQ 648
++D + +
Sbjct: 71 AFAMIIDKLEE 81
Score = 43.2 bits (97), Expect = 9e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +1
Query: 472 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
GC+IG+ G+KI E+R+ +GA++KI +N S++R V + G SI
Sbjct: 297 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 341
>AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protein 2
isoform b variant protein.
Length = 373
Score = 66.9 bits (156), Expect = 6e-11
Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 435
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 51 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 109
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P SI+
Sbjct: 110 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 169
Query: 616 GVREVLDLVRQVPIKG 663
V+++ ++ + P KG
Sbjct: 170 CVKQICVVMLESPPKG 185
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERI+ L G ++I
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 82
Query: 616 GVREVLDLVRQ 648
++D + +
Sbjct: 83 AFAMIIDKLEE 93
Score = 43.2 bits (97), Expect = 9e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +1
Query: 472 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
GC+IG+ G+KI E+R+ +GA++KI +N S++R V + G SI
Sbjct: 308 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 352
>AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protein 2
protein.
Length = 331
Score = 66.9 bits (156), Expect = 6e-11
Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 435
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P SI+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 157
Query: 616 GVREVLDLVRQVPIKG 663
V+++ ++ + P KG
Sbjct: 158 CVKQICVVMLESPPKG 173
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 616 GVREVLDLVRQ 648
++D + +
Sbjct: 71 AFAMIIDKLEE 81
Score = 43.2 bits (97), Expect = 9e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +1
Query: 472 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
GC+IG+ G+KI E+R+ +GA++KI +N S++R V + G SI
Sbjct: 266 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 310
>X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein.
Length = 365
Score = 64.9 bits (151), Expect = 2e-10
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 435
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P SI+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 157
Query: 616 GVREV----LDLVRQVPIKG 663
V+++ L+ + Q P KG
Sbjct: 158 CVKQICVVMLETLSQSPPKG 177
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 616 GVREVLDLVRQ 648
++D + +
Sbjct: 71 AFAMIIDKLEE 81
Score = 43.2 bits (97), Expect = 9e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +1
Query: 472 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
GC+IG+ G+KI E+R+ +GA++KI +N S++R V + G SI
Sbjct: 300 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 344
>BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein.
Length = 335
Score = 64.9 bits (151), Expect = 2e-10
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 435
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P SI+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 157
Query: 616 GVREV----LDLVRQVPIKG 663
V+++ L+ + Q P KG
Sbjct: 158 CVKQICVVMLETLSQSPPKG 177
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 616 GVREVLDLVRQ 648
++D + +
Sbjct: 71 AFAMIIDKLEE 81
Score = 43.2 bits (97), Expect = 9e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +1
Query: 472 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
GC+IG+ G+KI E+R+ +GA++KI +N S++R V + G SI
Sbjct: 270 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 314
>BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protein 2
protein.
Length = 366
Score = 64.9 bits (151), Expect = 2e-10
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 435
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P SI+
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 157
Query: 616 GVREV----LDLVRQVPIKG 663
V+++ L+ + Q P KG
Sbjct: 158 CVKQICVVMLETLSQSPPKG 177
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +R+L+H G +IGK G +K++RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 616 GVREVLDLVRQ 648
++D + +
Sbjct: 71 AFAMIIDKLEE 81
Score = 43.2 bits (97), Expect = 9e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +1
Query: 472 GCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
GC+IG+ G+KI E+R+ +GA++KI +N S++R V + G SI
Sbjct: 301 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 345
>Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein.
Length = 299
Score = 63.7 bits (148), Expect = 6e-10
Identities = 34/125 (27%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 435
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P S+
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTE 157
Query: 616 GVREV 630
V+++
Sbjct: 158 CVKQI 162
Score = 53.2 bits (122), Expect = 8e-07
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +R+L+H G +IGK G +K +RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 616 GVREVLDLVRQ 648
++D + +
Sbjct: 71 AFAMIIDKLEE 81
>X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein.
Length = 356
Score = 63.7 bits (148), Expect = 6e-10
Identities = 34/125 (27%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 435
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P S+
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTE 157
Query: 616 GVREV 630
V+++
Sbjct: 158 CVKQI 162
Score = 53.2 bits (122), Expect = 8e-07
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +R+L+H G +IGK G +K +RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 616 GVREVLDLVRQ 648
++D + +
Sbjct: 71 AFAMIIDKLEE 81
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +1
Query: 448 MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
+ I + GC+IG+ G+ I E+R+ +GA++KI +N SS R V + G SI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQVTITGSAASI 336
>U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein.
Length = 356
Score = 63.7 bits (148), Expect = 6e-10
Identities = 34/125 (27%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 435
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P S+
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTE 157
Query: 616 GVREV 630
V+++
Sbjct: 158 CVKQI 162
Score = 53.2 bits (122), Expect = 8e-07
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +R+L+H G +IGK G +K +RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 616 GVREVLDLVRQ 648
++D + +
Sbjct: 71 AFAMIIDKLEE 81
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +1
Query: 448 MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
+ I + GC+IG+ G+ I E+R+ +GA++KI +N SS R V + G SI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQVTITGSAASI 336
>BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protein 1
protein.
Length = 356
Score = 63.7 bits (148), Expect = 6e-10
Identities = 34/125 (27%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 435
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P S+
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTE 157
Query: 616 GVREV 630
V+++
Sbjct: 158 CVKQI 162
Score = 53.2 bits (122), Expect = 8e-07
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +R+L+H G +IGK G +K +RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 616 GVREVLDLVRQ 648
++D + +
Sbjct: 71 AFAMIIDKLEE 81
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +1
Query: 448 MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
+ I + GC+IG+ G+ I E+R+ +GA++KI +N SS R V + G SI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQVTITGSAASI 336
>AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 63.7 bits (148), Expect = 6e-10
Identities = 34/125 (27%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 435
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P S+ER + + G P S+
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTE 157
Query: 616 GVREV 630
V+++
Sbjct: 158 CVKQI 162
Score = 53.2 bits (122), Expect = 8e-07
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +R+L+H G +IGK G +K +RE++GAR+ I + P ERI+ L G ++I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 616 GVREVLDLVRQ 648
++D + +
Sbjct: 71 AFAMIIDKLEE 81
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +1
Query: 448 MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
+ I + GC+IG+ G+ I E+R+ +GA++KI +N SS R V + G SI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQVTITGSAASI 336
>U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein
protein.
Length = 644
Score = 52.8 bits (121), Expect = 1e-06
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Frame = +1
Query: 298 PDCPGPERVLSITAED------DETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 459
P G ++ L IT + E ++E+I+D E N+ GSR+G E + + I
Sbjct: 226 PQNTGADKPLRITGDPYKVQQAKEMVLELIRD-QGGFREVRNEYGSRIGGNE-GIDVPIP 283
Query: 460 QSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDL 639
+ G VIG+ G IK+++ G R++ F + ERI Q+ G PD + DL
Sbjct: 284 RFAVGIVIGRNGEMIKKIQNDAGVRIQ-FKPDDGTTPERIAQITGPPDRCQHAAEIITDL 342
Query: 640 VRQV 651
+R V
Sbjct: 343 LRSV 346
Score = 46.4 bits (105), Expect = 9e-05
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Frame = +1
Query: 298 PDCPG-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLI 456
PD G PER +T + L +I++ P FH+ G QE+ +I
Sbjct: 138 PDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MI 192
Query: 457 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS--SERIVQLIGKPDSIVSGVREV 630
S+AG VIGK G IK+L+E+ G ++ + PQ+ +++ +++ G P + V
Sbjct: 193 PASKAGLVIGKGGETIKQLQERAGVKM-VMIQDGPQNTGADKPLRITGDPYKVQQAKEMV 251
Query: 631 LDLVR 645
L+L+R
Sbjct: 252 LELIR 256
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 439 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS--SERIVQLIGKPDSI 609
+ ++ + G +IGK G IK + +++GAR+++ N P + + ++ + G P I
Sbjct: 378 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQI 436
>BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein.
Length = 653
Score = 52.8 bits (121), Expect = 1e-06
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Frame = +1
Query: 298 PDCPGPERVLSITAED------DETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 459
P G ++ L IT + E ++E+I+D E N+ GSR+G E + + I
Sbjct: 225 PQNTGADKPLRITGDPYKVQQAKEMVLELIRD-QGGFREVRNEYGSRIGGNE-GIDVPIP 282
Query: 460 QSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDL 639
+ G VIG+ G IK+++ G R++ F + ERI Q+ G PD + DL
Sbjct: 283 RFAVGIVIGRNGEMIKKIQNDAGVRIQ-FKPDDGTTPERIAQITGPPDRCQHAAEIITDL 341
Query: 640 VRQV 651
+R V
Sbjct: 342 LRSV 345
Score = 48.4 bits (110), Expect = 2e-05
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Frame = +1
Query: 133 KRDAYGDDGPAQKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITV-PDCP 309
+ D++G P + +++ + +P + ++ + I + PD
Sbjct: 81 QNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSG 140
Query: 310 G-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSR 468
G PER +T + L +I++ P FH+ G QE+ +I S+
Sbjct: 141 GLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MIPASK 195
Query: 469 AGCVIGKAGSKIKELREKTGARLKIFSNSAPQS--SERIVQLIGKPDSIVSGVREVLDLV 642
AG VIGK G IK+L+E+ G ++ + PQ+ +++ +++ G P + VL+L+
Sbjct: 196 AGLVIGKGGETIKQLQERAGVKM-VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELI 254
Query: 643 R 645
R
Sbjct: 255 R 255
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 439 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS--SERIVQLIGKPDSI 609
+ ++ + G +IGK G IK + +++GAR+++ N P + + ++ + G P I
Sbjct: 377 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQI 435
>AB209366-1|BAD92603.1| 493|Homo sapiens far upstream
element-binding protein variant protein.
Length = 493
Score = 52.8 bits (121), Expect = 1e-06
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Frame = +1
Query: 298 PDCPGPERVLSITAED------DETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIH 459
P G ++ L IT + E ++E+I+D E N+ GSR+G E + + I
Sbjct: 76 PQNTGADKPLRITGDPYKVQQAKEMVLELIRD-QGGFREVRNEYGSRIGGNE-GIDVPIP 133
Query: 460 QSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDL 639
+ G VIG+ G IK+++ G R++ F + ERI Q+ G PD + DL
Sbjct: 134 RFAVGIVIGRNGEMIKKIQNDAGVRIQ-FKPDDGTTPERIAQITGPPDRCQHAAEIITDL 192
Query: 640 VRQV 651
+R V
Sbjct: 193 LRSV 196
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +1
Query: 397 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS--S 570
FH+ G QE+ +I S+AG VIGK G IK+L+E+ G ++ + PQ+ +
Sbjct: 27 FHHGDGPGNAVQEI----MIPASKAGLVIGKGGETIKQLQERAGVKM-VMIQDGPQNTGA 81
Query: 571 ERIVQLIGKPDSIVSGVREVLDLVR 645
++ +++ G P + VL+L+R
Sbjct: 82 DKPLRITGDPYKVQQAKEMVLELIR 106
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 439 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS--SERIVQLIGKPDSI 609
+ ++ + G +IGK G IK + +++GAR+++ N P + + ++ + G P I
Sbjct: 228 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQI 286
>BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein.
Length = 360
Score = 51.2 bits (117), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1
Query: 424 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPD 603
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 195 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 253
Query: 604 SI 609
SI
Sbjct: 254 SI 255
Score = 46.4 bits (105), Expect = 9e-05
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 436 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVS 615
L +RML+H G +IGK G +K +RE++ AR+ I S P ERI + G ++
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 616 GV 621
V
Sbjct: 75 AV 76
Score = 43.6 bits (98), Expect = 6e-04
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 429
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 430 QELDVRMLIHQSRAGCVIGKAGSKIKELRE 519
+ +R++I S+ G +IGKAG+KIKE+RE
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
>AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 51.2 bits (117), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1
Query: 424 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPD 603
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 259 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 317
Query: 604 SI 609
SI
Sbjct: 318 SI 319
Score = 41.9 bits (94), Expect = 0.002
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +1
Query: 274 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 438
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 439 DVRMLIHQSRAGCVIGKAGSKIKELREKTG 528
+R++I S+ G +IGKAG+KIKE+RE G
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIREVRG 98
Score = 39.9 bits (89), Expect = 0.008
Identities = 17/49 (34%), Positives = 32/49 (65%)
Frame = +1
Query: 517 EKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQVPIKG 663
+ TGA++++ + P S+ER V + G PD+I+ VR++ ++ + P KG
Sbjct: 150 QTTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKG 198
>AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 51.2 bits (117), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1
Query: 424 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPD 603
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 259 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 317
Query: 604 SI 609
SI
Sbjct: 318 SI 319
Score = 41.9 bits (94), Expect = 0.002
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +1
Query: 274 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 438
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 439 DVRMLIHQSRAGCVIGKAGSKIKELREKTG 528
+R++I S+ G +IGKAG+KIKE+RE G
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIREVRG 98
Score = 39.9 bits (89), Expect = 0.008
Identities = 17/49 (34%), Positives = 32/49 (65%)
Frame = +1
Query: 517 EKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQVPIKG 663
+ TGA++++ + P S+ER V + G PD+I+ VR++ ++ + P KG
Sbjct: 150 QTTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKG 198
>AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protein
LIP4 protein.
Length = 276
Score = 51.2 bits (117), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1
Query: 424 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPD 603
G Q L+ GCVIG+ GSKI E+R+ +GA +KI N A + ER V + G P
Sbjct: 81 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPV 139
Query: 604 SI 609
SI
Sbjct: 140 SI 141
>U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2
protein.
Length = 652
Score = 49.6 bits (113), Expect = 1e-05
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Frame = +1
Query: 298 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 450
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 126 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 182
Query: 451 LIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS-ERIVQLIGKPDSIVSGVRE 627
+I +AG VIGK G IK+L+E+ G ++ + + + ++ ++ +++IG P +
Sbjct: 183 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEM 242
Query: 628 VLDLVRQVPIKG 663
V+D++R V G
Sbjct: 243 VMDILRNVTKAG 254
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 48.4 bits (110), Expect = 2e-05
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Frame = +1
Query: 298 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 450
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 182 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 238
Query: 451 LIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS-ERIVQLIGKPDSIVSGVRE 627
+I +AG VIGK G IK+L+E+ G ++ + + + ++ ++ +++IG P +
Sbjct: 239 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEM 298
Query: 628 VLDLVRQ 648
V+D++R+
Sbjct: 299 VMDILRE 305
Score = 31.1 bits (67), Expect = 3.7
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +1
Query: 379 MPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 558
MP +G G ++ I + G VIG+ G +K + ++TGA ++I
Sbjct: 406 MPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLP 465
Query: 559 PQSSERIVQLI--GKPDSI 609
P I G P I
Sbjct: 466 PNGDPNFKLFIIRGSPQQI 484
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 48.4 bits (110), Expect = 2e-05
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Frame = +1
Query: 298 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 450
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 182 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 238
Query: 451 LIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS-ERIVQLIGKPDSIVSGVRE 627
+I +AG VIGK G IK+L+E+ G ++ + + + ++ ++ +++IG P +
Sbjct: 239 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEM 298
Query: 628 VLDLVRQ 648
V+D++R+
Sbjct: 299 VMDILRE 305
Score = 31.1 bits (67), Expect = 3.7
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +1
Query: 379 MPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 558
MP +G G ++ I + G VIG+ G +K + ++TGA ++I
Sbjct: 406 MPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLP 465
Query: 559 PQSSERIVQLI--GKPDSI 609
P I G P I
Sbjct: 466 PNGDPNFKLFIIRGSPQQI 484
>U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3
protein.
Length = 600
Score = 47.2 bits (107), Expect = 5e-05
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Frame = +1
Query: 175 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 342
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 101 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 160
Query: 343 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 513
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 161 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 216
Query: 514 REKTGARLKIFSNS-APQSSERIVQLIGKPDSIVSGVREVLDLVRQ 648
+E+TG ++ + + P +++ +++ G + VL+++R+
Sbjct: 217 QERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIRE 262
>BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein.
Length = 261
Score = 47.2 bits (107), Expect = 5e-05
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Frame = +1
Query: 175 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 342
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 13 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 72
Query: 343 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 513
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 73 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 128
Query: 514 REKTGARLKIFSNS-APQSSERIVQLIGKPDSIVSGVREVLDLVRQ 648
+E+TG ++ + + P +++ +++ G + VL+++R+
Sbjct: 129 QERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIRE 174
>AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 47.2 bits (107), Expect = 5e-05
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Frame = +1
Query: 175 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 342
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 13 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 72
Query: 343 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 513
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 73 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 128
Query: 514 REKTGARLKIFSNS-APQSSERIVQLIGKPDSIVSGVREVLDLVRQ 648
+E+TG ++ + + P +++ +++ G + VL+++R+
Sbjct: 129 QERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIRE 174
>AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 47.2 bits (107), Expect = 5e-05
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Frame = +1
Query: 175 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 342
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 73 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 132
Query: 343 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 513
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 188
Query: 514 REKTGARLKIFSNS-APQSSERIVQLIGKPDSIVSGVREVLDLVRQ 648
+E+TG ++ + + P +++ +++ G + VL+++R+
Sbjct: 189 QERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIRE 234
>AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 47.2 bits (107), Expect = 5e-05
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Frame = +1
Query: 175 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 342
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 13 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 72
Query: 343 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 513
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 73 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 128
Query: 514 REKTGARLKIFSNS-APQSSERIVQLIGKPDSIVSGVREVLDLVRQ 648
+E+TG ++ + + P +++ +++ G + VL+++R+
Sbjct: 129 QERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIRE 174
>AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 47.2 bits (107), Expect = 5e-05
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Frame = +1
Query: 175 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 342
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 73 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 132
Query: 343 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 513
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 188
Query: 514 REKTGARLKIFSNS-APQSSERIVQLIGKPDSIVSGVREVLDLVRQ 648
+E+TG ++ + + P +++ +++ G + VL+++R+
Sbjct: 189 QERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIRE 234
>AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing
regulatory protein (FUSE binding protein 2) variant
protein.
Length = 384
Score = 46.8 bits (106), Expect = 7e-05
Identities = 24/87 (27%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +1
Query: 394 EFH-NQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSS 570
+FH N G + G + ++I +AG VIGK G IK+L+E+ G ++ + + + ++
Sbjct: 40 QFHDNANGGQNGTVQ---EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 96
Query: 571 -ERIVQLIGKPDSIVSGVREVLDLVRQ 648
++ +++IG P + V+D++R+
Sbjct: 97 VDKPLRIIGDPYKVQQACEMVMDILRE 123
Score = 31.1 bits (67), Expect = 3.7
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +1
Query: 379 MPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 558
MP +G G ++ I + G VIG+ G +K + ++TGA ++I
Sbjct: 224 MPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLP 283
Query: 559 PQSSERIVQLI--GKPDSI 609
P I G P I
Sbjct: 284 PNGDPNFKLFIIRGSPQQI 302
>BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein.
Length = 304
Score = 46.4 bits (105), Expect = 9e-05
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Frame = +1
Query: 298 PDCPG-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLI 456
PD G PER +T + L +I++ P FH+ G QE+ +I
Sbjct: 138 PDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MI 192
Query: 457 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQS--SERIVQLIGKPDSIVSGVREV 630
S+AG VIGK G IK+L+E+ G ++ + PQ+ +++ +++ G P + V
Sbjct: 193 PASKAGLVIGKGGETIKQLQERAGVKM-VMIQDGPQNTGADKPLRITGDPYKVQQAKEMV 251
Query: 631 LDLVR 645
L+L+R
Sbjct: 252 LELIR 256
>BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth factor
2 mRNA binding protein 2 protein.
Length = 598
Score = 44.8 bits (101), Expect = 3e-04
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +1
Query: 427 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDS 606
+QE+ V + I G +IGK G+ IK+L GA +KI P SER+V + G P++
Sbjct: 425 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 483
Score = 38.7 bits (86), Expect = 0.018
Identities = 19/75 (25%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 430 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS--NSAPQSSERIVQLIGKPD 603
+E+ +++L H G +IGK G +K++ +TG ++ I S + + + ER + + G +
Sbjct: 272 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVE 331
Query: 604 SIVSGVREVLDLVRQ 648
+ S E++ +R+
Sbjct: 332 ACASAEIEIMKKLRE 346
>AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding
protein 2 protein.
Length = 598
Score = 44.8 bits (101), Expect = 3e-04
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +1
Query: 427 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDS 606
+QE+ V + I G +IGK G+ IK+L GA +KI P SER+V + G P++
Sbjct: 425 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 483
Score = 38.7 bits (86), Expect = 0.018
Identities = 19/75 (25%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 430 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS--NSAPQSSERIVQLIGKPD 603
+E+ +++L H G +IGK G +K++ +TG ++ I S + + + ER + + G +
Sbjct: 272 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVE 331
Query: 604 SIVSGVREVLDLVRQ 648
+ S E++ +R+
Sbjct: 332 ACASAEIEIMKKLRE 346
>AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinoma
autoantigen protein.
Length = 556
Score = 44.8 bits (101), Expect = 3e-04
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +1
Query: 427 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDS 606
+QE+ V + I G +IGK G+ IK+L GA +KI P SER+V + G P++
Sbjct: 383 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 441
Score = 38.7 bits (86), Expect = 0.018
Identities = 19/75 (25%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 430 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS--NSAPQSSERIVQLIGKPD 603
+E+ +++L H G +IGK G +K++ +TG ++ I S + + + ER + + G +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVE 332
Query: 604 SIVSGVREVLDLVRQ 648
+ S E++ +R+
Sbjct: 333 ACASAEIEIMKKLRE 347
>U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like
RNA-binding protein protein.
Length = 498
Score = 44.4 bits (100), Expect = 4e-04
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 427 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSN-SAPQSSERIVQLIGKPD 603
D+ ++++ S AG +IGK G+ +K + E++GA +++ ER+V + G+P+
Sbjct: 134 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPE 193
Query: 604 SIVSGVREVLDLVRQVP 654
+ V ++ V++ P
Sbjct: 194 QVHKAVSAIVQKVQEDP 210
Score = 42.3 bits (95), Expect = 0.001
Identities = 24/83 (28%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = +1
Query: 415 SRMGDQ-ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERIVQ 585
S G++ E +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+
Sbjct: 31 SNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL 90
Query: 586 LIGKPDSIVSGVREVLDLVRQVP 654
+ G +++ + + + VR++P
Sbjct: 91 VQGTAEALNAVHSFIAEKVREIP 113
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERIVQLIGKP 600
V + + ++ G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 415 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSP 469
>AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nova-2
protein.
Length = 492
Score = 44.4 bits (100), Expect = 4e-04
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 427 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSN-SAPQSSERIVQLIGKPD 603
D+ ++++ S AG +IGK G+ +K + E++GA +++ ER+V + G+P+
Sbjct: 128 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPE 187
Query: 604 SIVSGVREVLDLVRQVP 654
+ V ++ V++ P
Sbjct: 188 QVHKAVSAIVQKVQEDP 204
Score = 42.3 bits (95), Expect = 0.001
Identities = 24/83 (28%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = +1
Query: 415 SRMGDQ-ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERIVQ 585
S G++ E +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+
Sbjct: 25 SNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL 84
Query: 586 LIGKPDSIVSGVREVLDLVRQVP 654
+ G +++ + + + VR++P
Sbjct: 85 VQGTAEALNAVHSFIAEKVREIP 107
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERIVQLIGKP 600
V + + ++ G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSP 463
>AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nova-2
[AA 29-492] protein.
Length = 464
Score = 44.4 bits (100), Expect = 4e-04
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 427 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSN-SAPQSSERIVQLIGKPD 603
D+ ++++ S AG +IGK G+ +K + E++GA +++ ER+V + G+P+
Sbjct: 100 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPE 159
Query: 604 SIVSGVREVLDLVRQVP 654
+ V ++ V++ P
Sbjct: 160 QVHKAVSAIVQKVQEDP 176
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/76 (28%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +1
Query: 433 ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERIVQLIGKPDS 606
E +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+ + G ++
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 63
Query: 607 IVSGVREVLDLVRQVP 654
+ + + + VR++P
Sbjct: 64 LNAVHSFIAEKVREIP 79
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERIVQLIGKP 600
V + + ++ G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 381 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSP 435
>AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain
containing protein.
Length = 516
Score = 43.2 bits (97), Expect = 9e-04
Identities = 18/60 (30%), Positives = 38/60 (63%)
Frame = +1
Query: 421 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKP 600
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ + ++ ER++ + G P
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV--DTEDVGDERVLLISGFP 105
>AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain
containing protein.
Length = 561
Score = 43.2 bits (97), Expect = 9e-04
Identities = 18/60 (30%), Positives = 38/60 (63%)
Frame = +1
Query: 421 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKP 600
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ + ++ ER++ + G P
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV--DTEDVGDERVLLISGFP 105
>AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH
domain-containing protein protein.
Length = 561
Score = 43.2 bits (97), Expect = 9e-04
Identities = 18/60 (30%), Positives = 38/60 (63%)
Frame = +1
Query: 421 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKP 600
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ + ++ ER++ + G P
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV--DTEDVGDERVLLISGFP 105
>AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding
protein protein.
Length = 606
Score = 43.2 bits (97), Expect = 9e-04
Identities = 18/60 (30%), Positives = 38/60 (63%)
Frame = +1
Query: 421 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKP 600
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ + ++ ER++ + G P
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV--DTEDVGDERVLLISGFP 105
>U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antigen-1
protein.
Length = 510
Score = 42.3 bits (95), Expect = 0.001
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSN-SAPQSSERIVQLIGKPDSIVSG 618
V++++ S AG +IGK G+ +K + E++GA +++ ER+V + G+P+
Sbjct: 177 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 236
Query: 619 VREVLDLVRQVPIKG 663
V ++ +++ P G
Sbjct: 237 VELIIQKIQEDPQSG 251
Score = 38.3 bits (85), Expect = 0.024
Identities = 22/81 (27%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Frame = +1
Query: 427 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA-----PQSSERIVQLI 591
D + +++LI AG +IGK G I +L+++TGA +K+ S P ++ER+ +
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQ 106
Query: 592 GKPDSIVSGVREVLDLVRQVP 654
G +++ + + + +R++P
Sbjct: 107 GTVEALNAVHGFIAEKIREMP 127
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERIVQLIGKP 600
V + + ++ G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 427 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 481
>BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 42.3 bits (95), Expect = 0.001
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSN-SAPQSSERIVQLIGKPDSIVSG 618
V++++ S AG +IGK G+ +K + E++GA +++ ER+V + G+P+
Sbjct: 174 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 233
Query: 619 VREVLDLVRQVPIKG 663
V ++ +++ P G
Sbjct: 234 VELIIQKIQEDPQSG 248
Score = 40.3 bits (90), Expect = 0.006
Identities = 21/78 (26%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +1
Query: 427 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERIVQLIGKP 600
D + +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+ + G
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV 106
Query: 601 DSIVSGVREVLDLVRQVP 654
+++ + + + +R++P
Sbjct: 107 EALNAVHGFIAEKIREMP 124
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERIVQLIGKP 600
V + + ++ G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 478
>BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 42.3 bits (95), Expect = 0.001
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSN-SAPQSSERIVQLIGKPDSIVSG 618
V++++ S AG +IGK G+ +K + E++GA +++ ER+V + G+P+
Sbjct: 174 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 233
Query: 619 VREVLDLVRQVPIKG 663
V ++ +++ P G
Sbjct: 234 VELIIQKIQEDPQSG 248
Score = 40.3 bits (90), Expect = 0.006
Identities = 21/78 (26%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +1
Query: 427 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERIVQLIGKP 600
D + +++LI AG +IGK G I +L+++TGA +K+ + P ++ER+ + G
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV 106
Query: 601 DSIVSGVREVLDLVRQVP 654
+++ + + + +R++P
Sbjct: 107 EALNAVHGFIAEKIREMP 124
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APQSSERIVQLIGKP 600
V + + ++ G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 478
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 40.7 bits (91), Expect = 0.005
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +1
Query: 478 VIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQV 651
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ +E+ L++ +
Sbjct: 742 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNL 797
Score = 36.3 bits (80), Expect = 0.098
Identities = 35/115 (30%), Positives = 56/115 (48%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 444
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 461 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 510
Query: 445 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
++I Q +IG+ G +I+E+R+K + F + A +S IVQL G + +
Sbjct: 511 DLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD--IVQLRGPKNEV 563
>BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein.
Length = 589
Score = 40.7 bits (91), Expect = 0.005
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +1
Query: 478 VIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQV 651
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ +E+ L++ +
Sbjct: 63 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNL 118
>BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth factor
2 mRNA binding protein 3 protein.
Length = 579
Score = 40.7 bits (91), Expect = 0.005
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDS 606
V + I G +IGK G IK+L GA +KI AP + R+V + G P++
Sbjct: 408 VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 462
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 40.7 bits (91), Expect = 0.005
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +1
Query: 478 VIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQV 651
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ +E+ L++ +
Sbjct: 372 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNL 427
Score = 36.3 bits (80), Expect = 0.098
Identities = 35/115 (30%), Positives = 56/115 (48%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 444
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 91 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 140
Query: 445 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
++I Q +IG+ G +I+E+R+K + F + A +S IVQL G + +
Sbjct: 141 DLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD--IVQLRGPKNEV 193
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 40.7 bits (91), Expect = 0.005
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +1
Query: 478 VIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQV 651
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ +E+ L++ +
Sbjct: 742 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNL 797
Score = 36.3 bits (80), Expect = 0.098
Identities = 35/115 (30%), Positives = 56/115 (48%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 444
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 461 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 510
Query: 445 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
++I Q +IG+ G +I+E+R+K + F + A +S IVQL G + +
Sbjct: 511 DLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD--IVQLRGPKNEV 563
>AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ16432 fis, clone BRACE3010076, highly similar
to Vigilin. ).
Length = 577
Score = 40.7 bits (91), Expect = 0.005
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +1
Query: 478 VIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQV 651
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ +E+ L++ +
Sbjct: 239 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNL 294
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 40.7 bits (91), Expect = 0.005
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +1
Query: 478 VIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQV 651
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ +E+ L++ +
Sbjct: 425 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNL 480
Score = 35.1 bits (77), Expect = 0.23
Identities = 34/115 (29%), Positives = 56/115 (48%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 444
++ QYK S+ +P P E+ I E D V+ K + LA SR+ + E
Sbjct: 144 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRL-ENERTK 193
Query: 445 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
++I Q +IG+ G +I+E+R+K + F + A +S IVQL G + +
Sbjct: 194 DLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD--IVQLRGPKNEV 246
>AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding
protein 3 protein.
Length = 579
Score = 40.7 bits (91), Expect = 0.005
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDS 606
V + I G +IGK G IK+L GA +KI AP + R+V + G P++
Sbjct: 408 VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 462
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 40.7 bits (91), Expect = 0.005
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +1
Query: 478 VIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQV 651
+IGK G KI+++R+ TGAR+ IF +A + ++ +IGK D++ +E+ L++ +
Sbjct: 742 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKELEALIQNL 797
Score = 36.3 bits (80), Expect = 0.098
Identities = 35/115 (30%), Positives = 56/115 (48%)
Frame = +1
Query: 265 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 444
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 461 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 510
Query: 445 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSI 609
++I Q +IG+ G +I+E+R+K + F + A +S IVQL G + +
Sbjct: 511 DLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSD--IVQLRGPKNEV 563
>U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding protein
KOC protein.
Length = 579
Score = 39.9 bits (89), Expect = 0.008
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDS 606
V I G +IGK G IK+L GA +KI AP + R+V + G P++
Sbjct: 408 VHQFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 462
>U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein.
Length = 579
Score = 39.9 bits (89), Expect = 0.008
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 442 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDS 606
V I G +IGK G IK+L GA +KI AP + R+V + G P++
Sbjct: 408 VHQFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 462
>DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding protein
1 isoform protein.
Length = 438
Score = 39.9 bits (89), Expect = 0.008
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +1
Query: 427 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDS 606
+QE+ V++ I G +IGK G IK+L A +KI P S R+V + G P++
Sbjct: 265 EQEM-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEA 323
>AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CRDBP
protein.
Length = 577
Score = 39.9 bits (89), Expect = 0.008
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +1
Query: 427 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDS 606
+QE+ V++ I G +IGK G IK+L A +KI P S R+V + G P++
Sbjct: 404 EQEM-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEA 462
>AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding
protein 1 protein.
Length = 577
Score = 39.9 bits (89), Expect = 0.008
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +1
Query: 427 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDS 606
+QE+ V++ I G +IGK G IK+L A +KI P S R+V + G P++
Sbjct: 404 EQEM-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEA 462
>BC067878-1|AAH67878.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 53 protein.
Length = 631
Score = 39.1 bits (87), Expect = 0.014
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +1
Query: 397 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSER 576
F +QG G +E + I + G VIG +GSKIK+L+ T +++I + SE
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKIQIING----ESEA 91
Query: 577 IVQLIGKPDSIVSGVREVLDLVRQ 648
V++ G + + L+R+
Sbjct: 92 KVRIFGNREMKAKAKAAIETLIRK 115
>BC051703-1|AAH51703.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 53 protein.
Length = 631
Score = 39.1 bits (87), Expect = 0.014
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +1
Query: 397 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSER 576
F +QG G +E + I + G VIG +GSKIK+L+ T +++I + SE
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKIQIING----ESEA 91
Query: 577 IVQLIGKPDSIVSGVREVLDLVRQ 648
V++ G + + L+R+
Sbjct: 92 KVRIFGNREMKAKAKAAIETLIRK 115
>AY039237-1|AAK72102.1| 630|Homo sapiens DEAD-box protein CAGE
protein.
Length = 630
Score = 39.1 bits (87), Expect = 0.014
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +1
Query: 397 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSER 576
F +QG G +E + I + G VIG +GSKIK+L+ T +++I + SE
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKIQIING----ESEA 91
Query: 577 IVQLIGKPDSIVSGVREVLDLVRQ 648
V++ G + + L+R+
Sbjct: 92 KVRIFGNREMKAKAKAAIETLIRK 115
>BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 43 protein.
Length = 648
Score = 33.1 bits (72), Expect = 0.91
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 424 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERI 579
G +EL + + G VIG+ GSKIK ++ T ++I P+S +I
Sbjct: 64 GHEELPLCFALKSHFVGAVIGRGGSKIKNIQSTTNTTIQIIQEQ-PESLVKI 114
>AK001746-1|BAA91878.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ10884 fis, clone NT2RP4001950. ).
Length = 440
Score = 33.1 bits (72), Expect = 0.91
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +1
Query: 337 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 516
A ++ E++KD++P E NQGG + G QE + LI I G L+
Sbjct: 189 ASQKSSMKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 247
Query: 517 EKTGARLKIFSNSAPQSSE 573
E A+ + N Q E
Sbjct: 248 EVKVAKPEEMKNLETQEEE 266
>AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein.
Length = 648
Score = 33.1 bits (72), Expect = 0.91
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 424 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQSSERI 579
G +EL + + G VIG+ GSKIK ++ T ++I P+S +I
Sbjct: 64 GHEELPLCFALKSHFVGAVIGRGGSKIKNIQSTTNTTIQIIQEQ-PESLVKI 114
>AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884)
protein.
Length = 865
Score = 32.7 bits (71), Expect = 1.2
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +1
Query: 337 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 516
A ++ E++KD++P E NQGG + G QE + LI I G L+
Sbjct: 303 ASQKSSVKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 517 EKTGARLKIFSNSAPQSSE 573
E A+ + N Q E
Sbjct: 362 EVKVAKPEEMKNLETQEEE 380
>AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens
cDNA FLJ11111 fis, clone PLACE1005923. ).
Length = 865
Score = 32.7 bits (71), Expect = 1.2
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +1
Query: 337 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 516
A ++ E++KD++P E NQGG + G QE + LI I G L+
Sbjct: 303 ASQKSSVKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 517 EKTGARLKIFSNSAPQSSE 573
E A+ + N Q E
Sbjct: 362 EVKVAKPEEMKNLETQEEE 380
>BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase
domain containing 1 protein.
Length = 865
Score = 32.3 bits (70), Expect = 1.6
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +1
Query: 337 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 516
A ++ E++KD++P E NQGG G QE + LI I G L+
Sbjct: 303 ASQKSSMKELLKDVLPQKEEI-NQGGRNYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 517 EKTGARLKIFSNSAPQSSE 573
E A+ + N Q E
Sbjct: 362 EVKVAKPEEMKNLETQEEE 380
>AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated
transcript 11 protein.
Length = 865
Score = 32.3 bits (70), Expect = 1.6
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +1
Query: 337 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 516
A ++ E++KD++P E NQGG G QE + LI I G L+
Sbjct: 303 ASQKSSMKELLKDVLPQKEEI-NQGGRNYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 517 EKTGARLKIFSNSAPQSSE 573
E A+ + N Q E
Sbjct: 362 EVKVAKPEEMKNLETQEEE 380
>AY950679-1|AAY34147.1| 659|Homo sapiens MEX3C protein.
Length = 659
Score = 30.7 bits (66), Expect = 4.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 478 VIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVL 633
++G+ G KIK LR KT +K + + E I + G+ + + RE+L
Sbjct: 247 IVGRQGCKIKALRAKTNTYIK----TPVRGEEPIFVVTGRKEDVAMAKREIL 294
>AY950677-1|AAY34145.1| 520|Homo sapiens MEX3A protein.
Length = 520
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 478 VIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVL 633
++G+ G KIK LR KT +K + + E + + G+ + + + RE++
Sbjct: 147 IVGRQGCKIKALRAKTNTYIK----TPVRGEEPVFMVTGRREDVATARREII 194
>AL132655-8|CAM28316.1| 625|Homo sapiens GNAS complex locus
protein.
Length = 625
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 4/34 (11%)
Frame = -1
Query: 634 PEPRAL-RTRSSPVSRSAERCAP---NSGARSSK 545
P+PRAL R+R P RSA+RCA SG RS++
Sbjct: 565 PKPRALSRSRRYPWRRSADRCAKKPWRSGPRSAQ 598
>AK057397-1|BAB71470.1| 142|Homo sapiens protein ( Homo sapiens
cDNA FLJ32835 fis, clone TESTI2003255. ).
Length = 142
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 498 ENQRVT*ENRCAPED-IFELRAPEFGAHRSADRETGLDRVRSARGSGPR 641
E+ + + RC P+ I A A S+D + LDRV +RG GPR
Sbjct: 56 ESSKCLTQGRCYPQAWILACSAALLQALASSDLQGSLDRVNYSRGLGPR 104
>AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein.
Length = 2486
Score = 29.9 bits (64), Expect = 8.5
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 478 VIGKAGSKIKELREKTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVR 645
VIG+ G I +RE TGA + I ++ +RI+ + G +S + + L++
Sbjct: 1623 VIGRGGCNINAIREFTGAHIDI-DKQKDKTGDRIITIRGGTESTRQATQLINALIK 1677
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,689,029
Number of Sequences: 237096
Number of extensions: 2166450
Number of successful extensions: 9581
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 9147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9557
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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