Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_B03
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.54 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.6  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   8.7  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   8.7  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   8.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 489 TNPSEQRWIVRILFIVPI 542
           T PSEQ+W + +L I P+
Sbjct: 372 TVPSEQQWGILVLIIAPL 389


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 430 NIPAMTCALRVCRNMGSC 377
           NI    C+   CRN GSC
Sbjct: 104 NINTDDCSPNPCRNNGSC 121


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 266 KQCDNNL*SNSQNEYHRYGEY 328
           +Q +NN  +N+QN +H  G +
Sbjct: 309 QQNNNNAATNNQNHHHHAGHH 329



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 386 HIPADPQRAGHRGNIRVHGSIHYLP 460
           HIPA        G IR HG  +Y P
Sbjct: 56  HIPAKRAAYDCEGVIRHHGQWNYSP 80


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +3

Query: 426  IFVFTALFITCQQIYQHLRW 485
            +FV     +T ++ Y H++W
Sbjct: 1278 LFVLIVFLLTLKKDYLHIKW 1297


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +3

Query: 426  IFVFTALFITCQQIYQHLRW 485
            +FV     +T ++ Y H++W
Sbjct: 1278 LFVLIVFLLTLKKDYLHIKW 1297


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +1

Query: 487 TQTHQSNVGSCESYLSSQYTAVTAGYLCSSSMETLTTFTSSPSGN 621
           T+T   N G+C   ++S       G+  S+    +    SSP  N
Sbjct: 28  TETSCMNGGTCIDGINSYICTCKPGFTGSNCQNRINLCDSSPCLN 72


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 523 SYLSSQYTAVTAGYLCSSSMETLTTFTSSPSG 618
           +Y SS+  +  A ++C          TSSP+G
Sbjct: 2   NYRSSKSISTQAVWVCMVLAVVFQEITSSPAG 33


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 523 SYLSSQYTAVTAGYLCSSSMETLTTFTSSPSG 618
           +Y SS+  +  A ++C          TSSP+G
Sbjct: 2   NYRSSKSISTQAVWVCMVLAVVFQEITSSPAG 33


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 523 SYLSSQYTAVTAGYLCSSSMETLTTFTSSPSG 618
           +Y SS+  +  A ++C          TSSP+G
Sbjct: 2   NYRSSKSISTQAVWVCMVLAVVFQEITSSPAG 33


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +1

Query: 430 SCSRLYSLLANRYTSICVGTQTHQSN 507
           +CS++ S + ++YT+  + T  H  N
Sbjct: 334 TCSQIPSEVEDKYTTYFLNTYPHLFN 359


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,978
Number of Sequences: 336
Number of extensions: 3677
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)