Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_B03
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69792-6|CAA93669.2| 398|Caenorhabditis elegans Hypothetical pr... 100 8e-22
Z69790-5|CAA93657.2| 398|Caenorhabditis elegans Hypothetical pr... 100 8e-22
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 29 2.1
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 29 2.1
U53341-2|AAC69108.2| 645|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z46242-5|CAA86330.2| 364|Caenorhabditis elegans Hypothetical pr... 28 6.6
U19861-1|AAA97554.2| 364|Caenorhabditis elegans mab-21 protein ... 28 6.6
AF016449-4|AAG23998.3| 330|Caenorhabditis elegans Serpentine re... 28 6.6
>Z69792-6|CAA93669.2| 398|Caenorhabditis elegans Hypothetical
protein F40E10.6 protein.
Length = 398
Score = 100 bits (240), Expect = 8e-22
Identities = 45/77 (58%), Positives = 62/77 (80%)
Frame = +3
Query: 390 FLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISL 569
F+++ SAQ +AG+ + AL IT QIYQHLR+Y+ P+EQRWIVRILFIVPIY SW+SL
Sbjct: 11 FIRSASAQGLAGLCTWAALLITSHQIYQHLRFYSCPAEQRWIVRILFIVPIYAFDSWLSL 70
Query: 570 LFFNGDSYYVYFFTVRE 620
+FF+ D+ Y+YF ++R+
Sbjct: 71 IFFS-DNVYIYFNSIRD 86
>Z69790-5|CAA93657.2| 398|Caenorhabditis elegans Hypothetical
protein F40E10.6 protein.
Length = 398
Score = 100 bits (240), Expect = 8e-22
Identities = 45/77 (58%), Positives = 62/77 (80%)
Frame = +3
Query: 390 FLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISL 569
F+++ SAQ +AG+ + AL IT QIYQHLR+Y+ P+EQRWIVRILFIVPIY SW+SL
Sbjct: 11 FIRSASAQGLAGLCTWAALLITSHQIYQHLRFYSCPAEQRWIVRILFIVPIYAFDSWLSL 70
Query: 570 LFFNGDSYYVYFFTVRE 620
+FF+ D+ Y+YF ++R+
Sbjct: 71 IFFS-DNVYIYFNSIRD 86
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 369 KPLQEPIFLQTRSAQVIAGIFVF-TALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIY 545
K LQ+ + L+T ++ + +F +AL +T + +H+ W +PS + W R
Sbjct: 2438 KTLQK-LSLETEHLTLMQKLQLFESALSVTQGEDLRHVLWLKSPSSEVWFDRRTNYTRSV 2496
Query: 546 GCYSWISLLFFNGDSY 593
C S + + GD +
Sbjct: 2497 ACMSMVGYILGLGDRH 2512
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 369 KPLQEPIFLQTRSAQVIAGIFVF-TALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIY 545
K LQ+ + L+T ++ + +F +AL +T + +H+ W +PS + W R
Sbjct: 2441 KTLQK-LSLETEHLTLMQKLQLFESALSVTQGEDLRHVLWLKSPSSEVWFDRRTNYTRSV 2499
Query: 546 GCYSWISLLFFNGDSY 593
C S + + GD +
Sbjct: 2500 ACMSMVGYILGLGDRH 2515
>U53341-2|AAC69108.2| 645|Caenorhabditis elegans Hypothetical
protein F49E10.4a protein.
Length = 645
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 336 QRISEIVHDVLKPLQEPIFLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQ 506
Q +SEI + + PL E I+L+ V G+ + T + C+Q++ L W+T EQ
Sbjct: 62 QLVSEIPYTL--PLLEAIYLKCELRTVEDGLILPTKE-LCCEQLFCQLVWWTAFCEQ 115
>Z46242-5|CAA86330.2| 364|Caenorhabditis elegans Hypothetical
protein F35G12.6 protein.
Length = 364
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 321 VNITAQRISEIVHDVLKPL--QEPIFLQTRS 407
V T QRI+++V ++LK + QEP F+ T S
Sbjct: 27 VTKTVQRIAKVVQEILKEVEAQEPRFINTLS 57
>U19861-1|AAA97554.2| 364|Caenorhabditis elegans mab-21 protein
protein.
Length = 364
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 321 VNITAQRISEIVHDVLKPL--QEPIFLQTRS 407
V T QRI+++V ++LK + QEP F+ T S
Sbjct: 27 VTKTVQRIAKVVQEILKEVEAQEPRFINTLS 57
>AF016449-4|AAG23998.3| 330|Caenorhabditis elegans Serpentine
receptor, class t protein16 protein.
Length = 330
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 417 IAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYS-WISLLFFNGDSY 593
I G++ F A F+T ++ + W+ +P+ + + + + +S I + F G
Sbjct: 172 ICGVYFFVATFLTKPVVFNPMSWFFDPNVGKDPSIYISTIHYFNNFSVIICTVLFYGYIA 231
Query: 594 YVYFFTVREL 623
YVY R +
Sbjct: 232 YVYLKESRSI 241
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,924,777
Number of Sequences: 27780
Number of extensions: 326475
Number of successful extensions: 895
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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