Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P07_F_A21
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice... 65 4e-11
AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice... 65 4e-11
AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice... 65 4e-11
AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice... 65 4e-11
AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated... 65 4e-11
AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated... 65 4e-11
AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated... 65 4e-11
AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated... 65 4e-11
AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated... 65 4e-11
Z81015-2|CAB02660.1| 411|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 28 5.0
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 28 6.6
>AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice
variant 1b-7b protein.
Length = 527
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
Frame = +3
Query: 474 PCFPLLALIFEKCELATCTPRD---PGVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 638
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 67 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 126
Query: 639 ADPE 650
+P+
Sbjct: 127 PNPQ 130
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 443 KRDKDAIYGHPLFP 484
KRDK++IY HPL+P
Sbjct: 57 KRDKESIYAHPLYP 70
>AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice
variant 1b-7a protein.
Length = 523
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
Frame = +3
Query: 474 PCFPLLALIFEKCELATCTPRD---PGVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 638
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 67 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 126
Query: 639 ADPE 650
+P+
Sbjct: 127 PNPQ 130
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 443 KRDKDAIYGHPLFP 484
KRDK++IY HPL+P
Sbjct: 57 KRDKESIYAHPLYP 70
>AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice
variant 1a-7b protein.
Length = 564
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
Frame = +3
Query: 474 PCFPLLALIFEKCELATCTPRD---PGVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 638
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 104 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 163
Query: 639 ADPE 650
+P+
Sbjct: 164 PNPQ 167
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 443 KRDKDAIYGHPLFP 484
KRDK++IY HPL+P
Sbjct: 94 KRDKESIYAHPLYP 107
>AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice
variant 1a-7a protein.
Length = 560
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
Frame = +3
Query: 474 PCFPLLALIFEKCELATCTPRD---PGVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 638
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 104 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 163
Query: 639 ADPE 650
+P+
Sbjct: 164 PNPQ 167
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 443 KRDKDAIYGHPLFP 484
KRDK++IY HPL+P
Sbjct: 94 KRDKESIYAHPLYP 107
>AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated
protein 62, isoform g protein.
Length = 490
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
Frame = +3
Query: 474 PCFPLLALIFEKCELATCTPRD---PGVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 638
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 30 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 89
Query: 639 ADPE 650
+P+
Sbjct: 90 PNPQ 93
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 443 KRDKDAIYGHPLFP 484
KRDK++IY HPL+P
Sbjct: 20 KRDKESIYAHPLYP 33
>AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated
protein 62, isoform b protein.
Length = 527
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
Frame = +3
Query: 474 PCFPLLALIFEKCELATCTPRD---PGVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 638
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 67 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 126
Query: 639 ADPE 650
+P+
Sbjct: 127 PNPQ 130
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 443 KRDKDAIYGHPLFP 484
KRDK++IY HPL+P
Sbjct: 57 KRDKESIYAHPLYP 70
>AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated
protein 62, isoform e protein.
Length = 523
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
Frame = +3
Query: 474 PCFPLLALIFEKCELATCTPRD---PGVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 638
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 67 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 126
Query: 639 ADPE 650
+P+
Sbjct: 127 PNPQ 130
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 443 KRDKDAIYGHPLFP 484
KRDK++IY HPL+P
Sbjct: 57 KRDKESIYAHPLYP 70
>AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated
protein 62, isoform a protein.
Length = 564
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
Frame = +3
Query: 474 PCFPLLALIFEKCELATCTPRD---PGVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 638
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 104 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 163
Query: 639 ADPE 650
+P+
Sbjct: 164 PNPQ 167
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 443 KRDKDAIYGHPLFP 484
KRDK++IY HPL+P
Sbjct: 94 KRDKESIYAHPLYP 107
>AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated
protein 62, isoform f protein.
Length = 560
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
Frame = +3
Query: 474 PCFPLLALIFEKCELATCTPRD---PGVAGGDVCSSESFNEDIAVFSKQIRQ--EKPYYI 638
P +PLL L+FEKCELAT TPRD G DVCSS SF +D+ F + ++ +K YY+
Sbjct: 104 PLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHTQENADKQYYV 163
Query: 639 ADPE 650
+P+
Sbjct: 164 PNPQ 167
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 443 KRDKDAIYGHPLFP 484
KRDK++IY HPL+P
Sbjct: 94 KRDKESIYAHPLYP 107
>Z81015-2|CAB02660.1| 411|Caenorhabditis elegans Hypothetical
protein C11E4.3 protein.
Length = 411
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 162 CPIIYVYVCTCLCGVL 209
C YVYVC C+C VL
Sbjct: 376 CFRFYVYVCVCVCAVL 391
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 28 RRASRFTAPRSATPRPEPPTNT 93
+RA R++ P S+TP P PP ++
Sbjct: 163 KRAPRYSPPPSSTPTPTPPPSS 184
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 180 YVCTCLCGVLGW-ARDRNRSWWPAEPYTRARAELSWLSLGTTRASTAEVTWRGERCTTST 356
Y C+CL G + NR + A+P + + + T T + W GE C T
Sbjct: 420 YTCSCLSQYFGTNCEEINRCNY-ADPCVNGDCQTTVDGITTNYTCTCDSGWTGENCDTMI 478
Query: 357 G*PIP 371
IP
Sbjct: 479 DYCIP 483
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,260,076
Number of Sequences: 27780
Number of extensions: 394439
Number of successful extensions: 1112
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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