Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P07_F_A16
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z75547-11|CAA99905.4|  394|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr...    28   5.0  

>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical protein
            C38D9.3 protein.
          Length = 1496

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 520  NSLKHILVIGYYIEICSCLMREMSSKHVYDDKILTIKVIWNL 645
            NSL HI+ I  +      +++   SK+ Y   + TI+ +WNL
Sbjct: 1041 NSLNHIIKINTHEVYAMTVLKITDSKYDYQKLVHTIEQMWNL 1082


>Z75547-11|CAA99905.4|  394|Caenorhabditis elegans Hypothetical
           protein R11D1.10a protein.
          Length = 394

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
 Frame = +3

Query: 294 QSRDKSPEVSADIPVELMEISKAMAPMTKEE-------WEKKQSIIRRVLDEETGRYR 446
           +S  K P ++A+ P ELM +++  A + K+E       W++ ++  R++ ++E  + R
Sbjct: 182 KSSSKEPAMNANNPSELMRVAEDRARIEKKEEEMEHKDWDELEARRRKIFEDEKEKNR 239


>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
           protein T04F3.1 protein.
          Length = 3517

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 433 VSSSNTLLIILCFFSHSSFVIGAMAFEIS 347
           + +S   +IILC F  S F I  M F+IS
Sbjct: 626 IRNSKKTVIILCHFRFSKFYIYKMVFDIS 654


>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
           protein T04F3.1 protein.
          Length = 3517

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 433 VSSSNTLLIILCFFSHSSFVIGAMAFEIS 347
           + +S   +IILC F  S F I  M F+IS
Sbjct: 626 IRNSKKTVIILCHFRFSKFYIYKMVFDIS 654


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,774,662
Number of Sequences: 27780
Number of extensions: 148862
Number of successful extensions: 461
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)