Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_P11
         (651 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB77AC Cluster: PREDICTED: similar to lethal (2)...    35   1.9  
UniRef50_A7TTB4 Cluster: Tkp3 protein; n=5; Vanderwaltozyma poly...    33   5.9  

>UniRef50_UPI0000DB77AC Cluster: PREDICTED: similar to lethal (2)
           k05819 CG3054-PA, isoform A isoform 1; n=1; Apis
           mellifera|Rep: PREDICTED: similar to lethal (2) k05819
           CG3054-PA, isoform A isoform 1 - Apis mellifera
          Length = 1377

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
 Frame = +1

Query: 295 LGYSTRHALIKLRNDISGVIEEYKKKIPTGFRL---ARDIISFSSEKVLLSGVAYTITLI 465
           LG STR AL  L+ D+  V++EY+++     +     +D +   S+   L   +    LI
Sbjct: 25  LGLSTRIALEILQRDVKRVLQEYEEEYKRNKKYKAWLKDTLHHRSQYTTLCWTSAIALLI 84

Query: 466 YIVCLLLTYLFGVSVQAHAYLLWEXXXXXXXXXXXXXXXXXEEYLYQNEIPHRVKKVLET 645
             + L++ + F ++   +  L +E                 +  L   EIP+RV+ +L+ 
Sbjct: 85  NAIILVIAF-FTINDTWYPTLPYEGLTVCCLVMLNFILVVSDNKLRHEEIPYRVRGLLDQ 143

Query: 646 M 648
           +
Sbjct: 144 L 144


>UniRef50_A7TTB4 Cluster: Tkp3 protein; n=5; Vanderwaltozyma
           polyspora DSM 70294|Rep: Tkp3 protein - Vanderwaltozyma
           polyspora DSM 70294
          Length = 409

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 447 IHNYIDLHSMPIINIPIWGLSTG 515
           IHN+IDLH+    NIPIW +  G
Sbjct: 245 IHNFIDLHNYVTTNIPIWFVLQG 267


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,755,295
Number of Sequences: 1657284
Number of extensions: 11082504
Number of successful extensions: 22493
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22491
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)