Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_P11
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   3.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.8  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 283 NEEILGYSTRHALIKLRNDISGVIEEYKK 369
           N ++ G  +   +  LR  I GV+EEY +
Sbjct: 323 NPDVRGIKSVQEVEMLREKIYGVLEEYTR 351


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 126 DDRKPSFIFKLLFIPV 173
           + RKPSF+ +   IPV
Sbjct: 415 ESRKPSFVIQFSHIPV 430


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 589 EEYLYQNEIPHRVKK 633
           + Y + NE+ HRVK+
Sbjct: 37  QNYTHNNEMYHRVKE 51


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 589 EEYLYQNEIPHRVKK 633
           + Y + NE+ HRVK+
Sbjct: 37  QNYTHNNEMYHRVKE 51


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 406 ISFSSEKVLLSGVAYTITLIYIVC 477
           ISF  E  L     Y +TL+YI+C
Sbjct: 308 ISFK-EAGLFMIAFYCMTLLYIIC 330


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 406 ISFSSEKVLLSGVAYTITLIYIVC 477
           ISF  E  L     Y +TL+YI+C
Sbjct: 308 ISFK-EAGLFMIAFYCMTLLYIIC 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,902
Number of Sequences: 336
Number of extensions: 3195
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)