Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_P05
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX640760-1|CAE45866.1| 1569|Homo sapiens hypothetical protein pr... 30 8.3
AL390071-2|CAI17182.1| 2943|Homo sapiens neurobeachin protein. 30 8.3
AL357083-2|CAI15737.1| 2943|Homo sapiens neurobeachin protein. 30 8.3
AL356430-2|CAH74071.1| 2943|Homo sapiens neurobeachin protein. 30 8.3
AL161902-1|CAI16334.1| 2943|Homo sapiens neurobeachin protein. 30 8.3
AL161718-1|CAH72182.1| 2943|Homo sapiens neurobeachin protein. 30 8.3
AL139083-1|CAH71882.1| 2943|Homo sapiens neurobeachin protein. 30 8.3
AL138690-1|CAH72296.1| 2943|Homo sapiens neurobeachin protein. 30 8.3
AF467288-1|AAM53531.1| 2946|Homo sapiens BCL8B protein protein. 30 8.3
>BX640760-1|CAE45866.1| 1569|Homo sapiens hypothetical protein
protein.
Length = 1569
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = -3
Query: 558 RQRQNSRGSRSARKG*QCSDRAALAPXXXXXXXXXXXXXXLTGQCALFVDPQRVLQRLDS 379
RQRQ RG++S+ S + + G + DP R+LQ +D
Sbjct: 140 RQRQRDRGNKSSHGS---SKPQEVPQSVTATAASKTPLENVPGNLSPIKDPDRLLQDVDI 196
Query: 378 TRLQLFLFRHFYD 340
RL+ +FR D
Sbjct: 197 NRLRAVVFRDVDD 209
>AL390071-2|CAI17182.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = -3
Query: 558 RQRQNSRGSRSARKG*QCSDRAALAPXXXXXXXXXXXXXXLTGQCALFVDPQRVLQRLDS 379
RQRQ RG++S+ S + + G + DP R+LQ +D
Sbjct: 1484 RQRQRDRGNKSSHGS---SKPQEVPQSVTATAASKTPLENVPGNLSPIKDPDRLLQDVDI 1540
Query: 378 TRLQLFLFRHFYD 340
RL+ +FR D
Sbjct: 1541 NRLRAVVFRDVDD 1553
>AL357083-2|CAI15737.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = -3
Query: 558 RQRQNSRGSRSARKG*QCSDRAALAPXXXXXXXXXXXXXXLTGQCALFVDPQRVLQRLDS 379
RQRQ RG++S+ S + + G + DP R+LQ +D
Sbjct: 1484 RQRQRDRGNKSSHGS---SKPQEVPQSVTATAASKTPLENVPGNLSPIKDPDRLLQDVDI 1540
Query: 378 TRLQLFLFRHFYD 340
RL+ +FR D
Sbjct: 1541 NRLRAVVFRDVDD 1553
>AL356430-2|CAH74071.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = -3
Query: 558 RQRQNSRGSRSARKG*QCSDRAALAPXXXXXXXXXXXXXXLTGQCALFVDPQRVLQRLDS 379
RQRQ RG++S+ S + + G + DP R+LQ +D
Sbjct: 1484 RQRQRDRGNKSSHGS---SKPQEVPQSVTATAASKTPLENVPGNLSPIKDPDRLLQDVDI 1540
Query: 378 TRLQLFLFRHFYD 340
RL+ +FR D
Sbjct: 1541 NRLRAVVFRDVDD 1553
>AL161902-1|CAI16334.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = -3
Query: 558 RQRQNSRGSRSARKG*QCSDRAALAPXXXXXXXXXXXXXXLTGQCALFVDPQRVLQRLDS 379
RQRQ RG++S+ S + + G + DP R+LQ +D
Sbjct: 1484 RQRQRDRGNKSSHGS---SKPQEVPQSVTATAASKTPLENVPGNLSPIKDPDRLLQDVDI 1540
Query: 378 TRLQLFLFRHFYD 340
RL+ +FR D
Sbjct: 1541 NRLRAVVFRDVDD 1553
>AL161718-1|CAH72182.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = -3
Query: 558 RQRQNSRGSRSARKG*QCSDRAALAPXXXXXXXXXXXXXXLTGQCALFVDPQRVLQRLDS 379
RQRQ RG++S+ S + + G + DP R+LQ +D
Sbjct: 1484 RQRQRDRGNKSSHGS---SKPQEVPQSVTATAASKTPLENVPGNLSPIKDPDRLLQDVDI 1540
Query: 378 TRLQLFLFRHFYD 340
RL+ +FR D
Sbjct: 1541 NRLRAVVFRDVDD 1553
>AL139083-1|CAH71882.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = -3
Query: 558 RQRQNSRGSRSARKG*QCSDRAALAPXXXXXXXXXXXXXXLTGQCALFVDPQRVLQRLDS 379
RQRQ RG++S+ S + + G + DP R+LQ +D
Sbjct: 1484 RQRQRDRGNKSSHGS---SKPQEVPQSVTATAASKTPLENVPGNLSPIKDPDRLLQDVDI 1540
Query: 378 TRLQLFLFRHFYD 340
RL+ +FR D
Sbjct: 1541 NRLRAVVFRDVDD 1553
>AL138690-1|CAH72296.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = -3
Query: 558 RQRQNSRGSRSARKG*QCSDRAALAPXXXXXXXXXXXXXXLTGQCALFVDPQRVLQRLDS 379
RQRQ RG++S+ S + + G + DP R+LQ +D
Sbjct: 1484 RQRQRDRGNKSSHGS---SKPQEVPQSVTATAASKTPLENVPGNLSPIKDPDRLLQDVDI 1540
Query: 378 TRLQLFLFRHFYD 340
RL+ +FR D
Sbjct: 1541 NRLRAVVFRDVDD 1553
>AF467288-1|AAM53531.1| 2946|Homo sapiens BCL8B protein protein.
Length = 2946
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = -3
Query: 558 RQRQNSRGSRSARKG*QCSDRAALAPXXXXXXXXXXXXXXLTGQCALFVDPQRVLQRLDS 379
RQRQ RG++S+ S + + G + DP R+LQ +D
Sbjct: 1487 RQRQRDRGNKSSHGS---SKPQEVPQSVTATAASKTPLENVPGNLSPIKDPDRLLQDVDI 1543
Query: 378 TRLQLFLFRHFYD 340
RL+ +FR D
Sbjct: 1544 NRLRAVVFRDVDD 1556
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,263,621
Number of Sequences: 237096
Number of extensions: 1561433
Number of successful extensions: 7368
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7368
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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