Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_P05
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical ...    28   5.0  
AL034393-26|CAI59121.1|  936|Caenorhabditis elegans Hypothetical...    28   6.7  
AL034393-25|CAI59120.1|  797|Caenorhabditis elegans Hypothetical...    28   6.7  
AL034393-24|CAA22312.3|  833|Caenorhabditis elegans Hypothetical...    28   6.7  

>AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical
           protein B0511.6 protein.
          Length = 544

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 57  TFLKLHTENKD*CLFTSQNAIGFHLKLLNTLSI 155
           TFLK +   K    F+S N++ FH +LLN + I
Sbjct: 307 TFLKKNKTKKVMVFFSSCNSVKFHHELLNYIDI 339


>AL034393-26|CAI59121.1|  936|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7c protein.
          Length = 936

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 134 TVKYTKYQ*ESQLRSYNVVDWV 199
           T+K+ K++ E+ +  Y V+DWV
Sbjct: 307 TIKFMKFKTENGINQYPVIDWV 328


>AL034393-25|CAI59120.1|  797|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7b protein.
          Length = 797

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 134 TVKYTKYQ*ESQLRSYNVVDWV 199
           T+K+ K++ E+ +  Y V+DWV
Sbjct: 291 TIKFMKFKTENGINQYPVIDWV 312


>AL034393-24|CAA22312.3|  833|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7a protein.
          Length = 833

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 134 TVKYTKYQ*ESQLRSYNVVDWV 199
           T+K+ K++ E+ +  Y V+DWV
Sbjct: 307 TIKFMKFKTENGINQYPVIDWV 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,666,064
Number of Sequences: 27780
Number of extensions: 262100
Number of successful extensions: 709
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)