SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_P04
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.9  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   3.8  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   3.8  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   3.8  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   3.8  
AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase l...    22   3.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   5.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.7  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   6.7  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.9  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 506 YDAVDLTNVHRQLLHHESNENTS 574
           Y+ V +  VHR    ++ N+NTS
Sbjct: 194 YEPVRIMGVHRPGFDNDCNKNTS 216


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 447 PRPPAPTISTLAEQILTCPSTP 382
           P PP P + + AE + T    P
Sbjct: 732 PPPPPPRVESFAETVRTVSKIP 753


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 377 PREGSDDCTFLS 342
           P +GS+DC FL+
Sbjct: 74  PAQGSEDCLFLN 85


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 377 PREGSDDCTFLS 342
           P +GS+DC FL+
Sbjct: 76  PAQGSEDCLFLN 87


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 377 PREGSDDCTFLS 342
           P +GS+DC FL+
Sbjct: 74  PAQGSEDCLFLN 85


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 377 PREGSDDCTFLS 342
           P +GS+DC FL+
Sbjct: 76  PAQGSEDCLFLN 87


>AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase like
           protein E2 protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 377 PREGSDDCTFLS 342
           P +GS+DC FL+
Sbjct: 48  PAQGSEDCLFLN 59


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 95  SITYGTYLLFALC 57
           SIT+  +LLF LC
Sbjct: 63  SITFNVHLLFLLC 75


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 492 ISPMPAPARYMAAGHPRPPAP 430
           +S MP PA     GHP    P
Sbjct: 91  LSGMPMPALGFGLGHPLESVP 111


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 160 SQCFRDGNIRTSQNF 204
           S C R G++RT  N+
Sbjct: 8   SACMRGGSVRTLNNY 22


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 550 VQQLSVHVGQIHRVIIHDAYFANARPGKVHGSRTS 446
           V+ LSV    I  + + D +F N +    H + TS
Sbjct: 109 VETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTS 143


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = -3

Query: 571 GVLVAFMVQQLSVHVGQIHRVIIHDAYFANARPGKVHGSR 452
           G+    + +QL V  G + +++       + RPG + GS+
Sbjct: 70  GIRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSK 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,857
Number of Sequences: 336
Number of extensions: 3398
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -