Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_O21
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   4.5  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   7.8  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   7.8  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   7.8  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 423 NEYVQLYLETVLPKFPLEGVNEVRNYLTNEDR-LAKISLS 539
           +E VQLY+E  + KF    V++  N+  +  R +AKI L+
Sbjct: 56  DENVQLYIECAMKKFSF--VDKDGNFNEHVSREIAKIFLN 93


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 68  MRRCAPLFARCIKIPPMTLQSQKI 139
           M+    +FA CI +  MT++  KI
Sbjct: 1   MKTIVVIFAFCICVNAMTIEELKI 24


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 68  MRRCAPLFARCIKIPPMTLQSQKI 139
           M+    +FA CI +  MT++  KI
Sbjct: 1   MKTIVVIFAFCICVNAMTIEELKI 24


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +1

Query: 13  KHSN*NKYIETKTN*NGTNEKMCSAFC*VYQNTTY 117
           K+SN N Y     N N  N    + +  +Y N  Y
Sbjct: 323 KYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNINY 357


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,681
Number of Sequences: 438
Number of extensions: 3161
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)