Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_O20
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0006 + 74000-76441                                               28   7.5  
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859...    27   9.9  
09_04_0666 + 19318512-19318578,19319185-19319273,19321344-193221...    27   9.9  
05_05_0351 - 24319356-24319385,24319470-24320902,24321011-243211...    27   9.9  
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647...    27   9.9  

>10_01_0006 + 74000-76441
          Length = 813

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 376 YRVILGVERIIIILHKDCM 432
           YR+ LGV R I  LH++C+
Sbjct: 611 YRIALGVARAIAYLHEECL 629


>11_06_0561 -
           24984960-24985205,24985283-24985354,24985906-24985977,
           24986612-24986782,24987464-24987653,24987733-24987976,
           24988162-24988474,24988687-24989517,24989628-24989672,
           24989677-24989790,24989877-24990371,24990627-24990824,
           24990902-24991357
          Length = 1148

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/66 (19%), Positives = 32/66 (48%)
 Frame = +2

Query: 35  LVCVSIE*LKMTLFKLKSAPILLIEDDINVNTLPLLFALLEDEKNVINFHIYEHQEELWK 214
           ++C  +   ++   KL +  ILL++D   +  + +L  L    ++++ F  + H + + K
Sbjct: 652 IICTPVCSSQLRELKLDTIDILLVDDAAQIKEIDMLIPLSFSPRHIVMFGDHLHLQPMVK 711

Query: 215 EAFKKQ 232
               K+
Sbjct: 712 SEVCKE 717


>09_04_0666 +
           19318512-19318578,19319185-19319273,19321344-19322171,
           19322264-19322419,19322507-19322881
          Length = 504

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 24/78 (30%), Positives = 33/78 (42%)
 Frame = +3

Query: 252 SEYQDEKYDIYTKIPCTMIVDSVHQMFYSLGSNKFMKLLKRLQGNPWCRKDNNNLTQRLY 431
           + Y D KYD     PC+++ D         GS+     L R   +P    +  NLT RL+
Sbjct: 157 TNYFDSKYDDEYNFPCSLLSD-------GRGSSMRHLYLSRCSFHPTINLELRNLT-RLH 208

Query: 432 GTFIKAENTYELHC*CSN 485
             F+      EL C  SN
Sbjct: 209 LAFVHITGN-ELGCVLSN 225


>05_05_0351 -
           24319356-24319385,24319470-24320902,24321011-24321180,
           24321302-24321485,24323094-24323264,24324002-24324125
          Length = 703

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 146 ALLEDEKNVINFHIYEHQEELWKEAFKK 229
           A L +EK+   FH+ EH +EL K  +K+
Sbjct: 616 ASLNNEKSDFRFHLVEHVKELVKPIWKE 643


>04_01_0492 +
           6476586-6476873,6477414-6477686,6477769-6477948,
           6478436-6478696,6479171-6479303,6479404-6479494,
           6479921-6480023,6480557-6480660,6480809-6480902,
           6480985-6481140,6481224-6481286,6481388-6481453,
           6481670-6481870,6481999-6482076,6482165-6482284,
           6482382-6482462,6482548-6482633,6482920-6483031,
           6483093-6483170,6483306-6483482
          Length = 914

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 152 LEDEKNVINFHIYEHQEELWKEAFKK 229
           LED +  + F + +H +ELW+E  ++
Sbjct: 732 LEDIQEAVEFVMEQHDDELWEELIRQ 757


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,461,333
Number of Sequences: 37544
Number of extensions: 232079
Number of successful extensions: 472
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)