Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_O20
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical ...    29   2.2  
Z74038-6|CAA98496.1|  423|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC090999-3|AAK26147.1|  536|Caenorhabditis elegans Hypothetical ...    28   5.0  
AC024812-8|AAF59557.4|  912|Caenorhabditis elegans Hypothetical ...    27   8.8  

>AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical
           protein K02E7.11 protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = +2

Query: 92  PILLIEDDIN----VNTLPLLFALLEDEKNVINFHIY 190
           PILL+   IN    ++++  L  +L+D+K  + FHIY
Sbjct: 51  PILLVLVTINFLWFISSISALICVLQDQKRYLRFHIY 87


>Z74038-6|CAA98496.1|  423|Caenorhabditis elegans Hypothetical
           protein F58B4.5 protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -1

Query: 336 NKTFDEQNLLS*YMVSLYICHIFHLGI 256
           +K FD++N L  Y++S Y  +I H+G+
Sbjct: 141 SKPFDDENKLKAYLISEYYPNIHHIGM 167


>AC090999-3|AAK26147.1|  536|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.7 protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -2

Query: 500 LLSKLITALAM*FICILSFDECAIQSL 420
           L ++LIT   +  IC+LS D CA QSL
Sbjct: 40  LNAQLITITNLYGICVLSTDRCACQSL 66


>AC024812-8|AAF59557.4|  912|Caenorhabditis elegans Hypothetical
           protein Y54E10BR.1 protein.
          Length = 912

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = -2

Query: 572 NEKISSVFINL-APFLILINAFKTLLLSKLITALAM*FICILSFDECAIQSLCKIIIILS 396
           N    ++FI++ +PF + I     LL+  L+   A  F  I+ FD+ +IQ LC   +I +
Sbjct: 777 NPSTLNLFISVFSPFTMAILLILKLLIPILLVTSA--FASIVRFDQESIQRLCCFSLIFT 834


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,165,158
Number of Sequences: 27780
Number of extensions: 256383
Number of successful extensions: 566
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)