Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_O17
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 2e-04
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 38 0.001
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 34 0.021
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 34 0.021
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 33 0.048
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 32 0.063
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 32 0.063
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.19
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.25
SPBC3B8.02 |php5||CCAAT-binding factor complex subunit Php5|Schi... 30 0.34
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 29 0.44
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 29 0.59
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 29 0.59
SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyc... 28 1.0
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 28 1.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.4
SPBC1711.08 |||chaperone activator Aha1 |Schizosaccharomyces pom... 24 2.0
SPAC12B10.16c |mug157||conserved protein |Schizosaccharomyces po... 27 2.4
SPAPB1A10.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 2.4
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 2.4
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 3.1
SPAC23H3.02c |ini1||RING finger-like protein Ini1|Schizosaccharo... 27 3.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 4.1
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.5
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 26 5.5
SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1 |Schiz... 26 5.5
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 7.2
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 25 7.2
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 25 9.5
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 25 9.5
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 25 9.5
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 25 9.5
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 9.5
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 40.3 bits (90), Expect = 2e-04
Identities = 28/92 (30%), Positives = 34/92 (36%), Gaps = 9/92 (9%)
Frame = +3
Query: 318 PYPTTQGAPYPTTQGAP---YPTTQGLPYPV---AQSVPYPVAQSAPYPVAQNAP---YP 470
P P+ P P GAP P+ P PV A VP P + P P AP P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Query: 471 TTQGAPYPTTHGAPYPVHHGVGGYSMAPPPAD 566
+ P P PV G PPP++
Sbjct: 1165 SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSE 1196
Score = 29.1 bits (62), Expect = 0.59
Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Frame = +3
Query: 345 YPTTQGAPYPTTQGLPYPVAQSVPYPVAQS----APYPVAQNAPYPTTQGA-PYPTTHGA 509
+P + P + P+A+ P P S P P A P P A P P
Sbjct: 990 HPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTST 1049
Query: 510 PYPVHHGVGGYSMAPPP 560
P PV G APPP
Sbjct: 1050 P-PVPKSSSGAPSAPPP 1065
Score = 25.4 bits (53), Expect = 7.2
Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = +3
Query: 309 RVAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSV-PYPVAQSAPYPVAQNAPYPTTQGA 485
RV P P P P P+ P PV + P P+ S P PV +++ +
Sbjct: 1010 RVPPVPKLSSKAPPV----PLPSADAPPIPVPSTAPPVPIPTSTP-PVPKSSSGAPSAPP 1064
Query: 486 PYPTTHGAPYPVHHGVGGYSMAPP 557
P P AP + S APP
Sbjct: 1065 PVP----APSSEIPSIPAPSGAPP 1084
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = -1
Query: 495 SGMVHPALLGMAHSEQPDMAHSEQPGMAHSEQLGMVDPELSGMAHPELSGMEHPELSGMA 316
+G + P G + ++ G +Q G +P+ +G P+ +GM P+ +G +
Sbjct: 418 TGFMQPQRTGFVQPQATGFIQPQRTGFVQPQQNGFFNPQPTGYMQPQRTGMMQPQRTGFS 477
Query: 315 QP 310
QP
Sbjct: 478 QP 479
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -1
Query: 282 SRVRRIDDDVCGR--YQHACLSPAPSTAAEYYTKDYD 178
+R R DDD R Y+ + LS APS A+ Y D D
Sbjct: 159 TRSSRFDDDDDDRAPYEESRLSRAPSRASRYDDDDRD 195
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 33.9 bits (74), Expect = 0.021
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +3
Query: 342 PYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPV 521
P+P TQ +P T+ +P P+P + YP P + GA P H +PYP
Sbjct: 162 PFPPTQHH-HPHTRPPHHP-----PHPHFHNNNYPPPYCFQSPVSPGATVPLQHHSPYPS 215
Query: 522 HHGVGGY 542
+G G+
Sbjct: 216 DNGFPGH 222
Score = 31.1 bits (67), Expect = 0.15
Identities = 22/75 (29%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Frame = +3
Query: 294 HTRQLRVAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQN--APY 467
HTR P+P YP P + G P+ PYP P Q APY
Sbjct: 172 HTRPPHHPPHPHFHNNNYPPPYCFQSPVSPGATVPLQHHSPYPSDNGFPGHRRQTHFAPY 231
Query: 468 PTTQGAPYPTTHGAP 512
Q A P+ P
Sbjct: 232 YYPQRATSPSLKQVP 246
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 33.9 bits (74), Expect = 0.021
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +3
Query: 300 RQLRVAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYP-VAQSAPYPVAQNAPYPTT 476
RQ P+ Q P P QG+ P +P P+ P V +P P Q T+
Sbjct: 333 RQTTTTPFAGNQVMPTPQVQGSRPPPPPPMPAPIYNVPNVPTVPTVSPNPFLQPTFSGTS 392
Query: 477 QGAPYPTTH 503
Q + +P+ H
Sbjct: 393 QASAHPSIH 401
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 32.7 bits (71), Expect = 0.048
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +3
Query: 354 TQGAPYP-TTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAP---YPTTHGAP 512
T +P P T LP P +VP A + P V + PTT P PT GAP
Sbjct: 421 TNASPAPLVTPSLPVPSIPAVPGMEAMAMPPGVTSSIAVPTTSSMPLQGMPTMFGAP 477
Score = 31.5 bits (68), Expect = 0.11
Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Frame = +3
Query: 297 TRQLRVAPYPTTQGAPYP-TTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAP--- 464
+RQ + P T +P P T P P+ +P A ++P V S P + P
Sbjct: 413 SRQEKTQP---TNASPAPLVTPSLPVPSIPAVPGMEAMAMPPGVTSSIAVPTTSSMPLQG 469
Query: 465 YPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPPAD 566
PT GAP + G P G G + P D
Sbjct: 470 MPTMFGAPGVSAPGTEAP---GTGTPGLTTPGVD 500
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 32.3 bits (70), Expect = 0.063
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +3
Query: 381 QGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPP 560
+GL P SV + S P P N+ P T A + AP P Y AP P
Sbjct: 43 RGLTIPPPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQP 102
Score = 28.7 bits (61), Expect = 0.77
Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +3
Query: 291 CHTRQLRVAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVA-QNAPY 467
C R L + P P+ + P+ P P+ P + A AP P A QN Y
Sbjct: 40 CPVRGLTIPPPPSVDHSAPPS---GPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAY 96
Query: 468 PTTQGAPYPTTHGAP 512
PYP G P
Sbjct: 97 GAAP-QPYPPQGGYP 110
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 32.3 bits (70), Expect = 0.063
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +3
Query: 351 TTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTT 500
TTQ P T + + P ++ VA+N PYP Q P T+
Sbjct: 188 TTQHTQLPKTSAVSHQKPHEAPSTAVKAPTATVAENEPYPKPQSVPTTTS 237
Score = 29.9 bits (64), Expect = 0.34
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +3
Query: 270 ALPDSGXCHTRQLRVAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPV 449
ALP + H + TTQ P T + P ++ VA++ PYP
Sbjct: 172 ALPST---HANPVAAPSTATTQHTQLPKTSAVSHQKPHEAPSTAVKAPTATVAENEPYPK 228
Query: 450 AQNAPYPTT 476
Q+ P T+
Sbjct: 229 PQSVPTTTS 237
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.19
Identities = 24/85 (28%), Positives = 28/85 (32%), Gaps = 2/85 (2%)
Frame = +3
Query: 270 ALPDSGXCHTRQLRVAPYPTTQGAPYPTTQGAPYPTTQGLPY--PVAQSVPYPVAQSAPY 443
ALP G + + P PT P P LP P A +P + P
Sbjct: 402 ALPPLG--NASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPL 459
Query: 444 PVAQNAPYPTTQGAPYPTTHGAPYP 518
P A P AP P AP P
Sbjct: 460 PAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.3 bits (65), Expect = 0.25
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +3
Query: 318 PYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPT-TQGAPYP 494
P PTT + +T P + L P+ +VP S P+ + T T +P P
Sbjct: 164 PLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLP 223
Query: 495 TT 500
TT
Sbjct: 224 TT 225
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 315 APYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPT-TQGAPY 491
+P P+T + +T P + L P+ +VP S P+ + T T P
Sbjct: 106 SPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPL 165
Query: 492 PTT 500
PTT
Sbjct: 166 PTT 168
>SPBC3B8.02 |php5||CCAAT-binding factor complex subunit
Php5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 415
Score = 29.9 bits (64), Expect = 0.34
Identities = 21/67 (31%), Positives = 26/67 (38%)
Frame = +3
Query: 318 PYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPT 497
P+PT G P QG P PT LP+ QS P Q + +P Q
Sbjct: 218 PFPTQAGLP---NQGFPMPTGSQLPFSNQQS-SQPSMQYSSHPSRMQQMQDIDQSMYKQQ 273
Query: 498 THGAPYP 518
G+ YP
Sbjct: 274 RLGSEYP 280
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 29.5 bits (63), Expect = 0.44
Identities = 18/68 (26%), Positives = 24/68 (35%)
Frame = +2
Query: 329 NSGCSIPDNSGCAIPDNSGSTIPSCSECAIPGCSECAISGCSECAIPNNAGCTIPDNARC 508
+S CS D+S P SC P C GC C+ + C+ + C
Sbjct: 223 SSCCSKKDSSPSEKPSCCSQEKKSCCSSKKPSCCSQEKKGC--CSTEKTSCCSQEKKSCC 280
Query: 509 ALPSPSWC 532
PS C
Sbjct: 281 TSEKPSCC 288
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 29.1 bits (62), Expect = 0.59
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +3
Query: 390 PYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAP 512
P P Q+ P + SAP Q YP Q APYP P
Sbjct: 208 PPPPQQNYPPAASSSAPPMQYQQTAYPPQQ-APYPPVQAYP 247
Score = 26.6 bits (56), Expect = 3.1
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +3
Query: 402 AQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAP 554
AQ P P Q+ P + +AP Q YP APYP V Y AP
Sbjct: 204 AQPPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQ-APYP---PVQAYPQAP 250
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 29.1 bits (62), Expect = 0.59
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 360 GAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGV 533
G P PT++ P+P + A P PV QN P T+ P P P+ + V
Sbjct: 961 GLP-PTSKSKPFPRLATGGSTAAARGPRPVVQNKP-AATKPVSMPAAKSKPAPMANPV 1016
>SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 529
Score = 28.3 bits (60), Expect = 1.0
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 321 YPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAP--YPVAQNAPYP 470
Y + G P+ TTQ A P Y V++ VA AP +P+ N P
Sbjct: 62 YTSMHGLPFSTTQMAAAPAHPTTGYNVSRVTSPNVANFAPGYFPLPNNTTQP 113
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 28.3 bits (60), Expect = 1.0
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = +3
Query: 324 PTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYP 494
PTT G Y PYP Q + + VP VAQ A P A P P
Sbjct: 23 PTTSGIVYNMFPACPYPHVQNPAFHGSVDVP-QVAQKAFDPQAATVSESANVSRPTP 78
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +3
Query: 363 APYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAP 512
A PT G P A V P A PV AP T AP P++ AP
Sbjct: 1430 ASQPTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVT-NAPAPSSAPAP 1478
>SPBC1711.08 |||chaperone activator Aha1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 336
Score = 24.2 bits (50), Expect(2) = 2.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 404 SNWVW*TLSCRVW 366
+NW W + CRVW
Sbjct: 9 NNWHWTSKDCRVW 21
Score = 21.4 bits (43), Expect(2) = 2.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 368 WRTLSCRVWSTLSCRVWRNPELP 300
W + CRVWS + N ELP
Sbjct: 13 WTSKDCRVWS----HEYFNKELP 31
>SPAC12B10.16c |mug157||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 609 LRGSVPRVLGSPHSGLQGVEPSSILL 532
L+G V +G PH GL+ V P S+++
Sbjct: 412 LKGKVISGIGGPHIGLRNVWPMSLIV 437
>SPAPB1A10.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/69 (21%), Positives = 30/69 (43%)
Frame = +3
Query: 174 NHHSPLYNILLLSTAPERGTRVDTAHKRRRQCALPDSGXCHTRQLRVAPYPTTQGAPYPT 353
+H ++ L+T + + R + A+ S H +L++ P+ PY +
Sbjct: 114 DHPDKSGQVIDLATGQILDKQTEDIDDDRNKSAVSKSLVRHPHRLKMLPFGIQSAHPYIS 173
Query: 354 TQGAPYPTT 380
+ + YPTT
Sbjct: 174 SLNSNYPTT 182
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 2.4
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = +3
Query: 327 TTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHG 506
TT+ A Q A +P +P P A +V PVA AP A A P AP P
Sbjct: 352 TTEAAAAQYPQAA-FPPPPVMPQPAAAAVTTPVA--APVAAAA-AAVPVPPPAPAPA--A 405
Query: 507 APYPVHHGVGGYSMAPPPA 563
AP H V Y A A
Sbjct: 406 AP-AAEHVVALYDYAAQAA 423
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 327 TTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYP 446
T+ + TT P TT G V VP P A S+P+P
Sbjct: 768 TSGSVGFTTTIATPVGTTAGT---VLIDVPTPTASSSPFP 804
>SPAC23H3.02c |ini1||RING finger-like protein
Ini1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 383 GSTIPSCSECAIPGCSECAISGCSEC 460
GS+ C C PG S+C CSEC
Sbjct: 52 GSSQDRCIICGAPGVSDCYY--CSEC 75
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 324 PTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYP 494
P P P+ AP P P P+ S+P P +AP +AP + P P
Sbjct: 144 PPRPSIPPPSPASAP-PIPSKAP-PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 5.5
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 317 AIPDNSGCSIPDNSGCAIPD---NSGSTIPSCSECAIPGCSECAISGCSECAIPNNAGCT 487
++ ++ SIP +S A +S S IPS S + S AIS S + +++ T
Sbjct: 13 SLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFT 72
Query: 488 IP 493
P
Sbjct: 73 SP 74
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 5.5
Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 1/81 (1%)
Frame = +3
Query: 327 TTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAP-YPTTH 503
+T PY GAP G AQ+V A APY V P+ Q P +
Sbjct: 162 STPAVPY---YGAPDQQQMGQRPEFAQNVSQGFAGQAPYNVRPGYGMPSNQKPPNFAPGM 218
Query: 504 GAPYPVHHGVGGYSMAPPPAD 566
AP P + PP +
Sbjct: 219 PAPGPTAVSASPSLQSMPPTN 239
>SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 676
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 281 LRXVPYPATQGCAIPDNSGCSIPDNSGCA-IPDNSGSTIPSCSECAIPGCSE 433
L V P G + + S ++ N C + D++GS +P C+E + C E
Sbjct: 422 LSIVLCPMLIGYGLTEISAAAMVQNPACFNLDDSAGSLLP-CTEMKLVDCEE 472
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +2
Query: 209 VDGAGERHAC*YRPQTSSSMRLTRLRXVPYPATQGCAIPDN 331
V G G A Y+P +S L L+ P Q +P N
Sbjct: 1718 VHGVGAEMASPYQPLQPASAHLPNLQPTLAPINQNAYVPSN 1758
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.4 bits (53), Expect = 7.2
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 13/86 (15%)
Frame = +3
Query: 342 PYPTTQGAPYPTTQGLPYPVAQSVPY--PVAQSAPYPV----AQNAPYPTTQGAPYPTT- 500
P P Q A + L + P+ P QSA P +QNAP+ AP P T
Sbjct: 438 PAPWQQPAAPQSAPALSMNPSSLPPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAPLPPTT 497
Query: 501 ---HGAPYPVHHGVGG---YSMAPPP 560
G P P G G +M+ PP
Sbjct: 498 FAPPGVPLPPIPGAPGMPNLNMSQPP 523
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 444 PVAQNAP--YPTTQGAPYPTTHGAPYPV 521
P Q P + TQGAP T+G P PV
Sbjct: 404 PSTQKLPSNFRVTQGAPPSHTYGPPPPV 431
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 492 PTTHGAPYPVHHGVGGYSMAPPP 560
P H P P+HH G + M PPP
Sbjct: 203 PGEHMPPPPMHHKPGEH-MPPPP 224
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 492 PTTHGAPYPVHHGVGGYSMAPPP 560
P H P P+HH G + M PPP
Sbjct: 216 PGEHMPPPPMHHEPGEH-MPPPP 237
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 492 PTTHGAPYPVHHGVGGYSMAPPP 560
P H P P+HH G + M PPP
Sbjct: 229 PGEHMPPPPMHHEPGEH-MPPPP 250
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 492 PTTHGAPYPVHHGVGGYSMAPPP 560
P H P P+HH G + M PPP
Sbjct: 242 PGEHMPPPPMHHEPGEH-MPPPP 263
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 492 PTTHGAPYPVHHGVGGYSMAPPP 560
P H P P+HH G + M PPP
Sbjct: 255 PGEHMPPPPMHHEPGEH-MPPPP 276
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 492 PTTHGAPYPVHHGVGGYSMAPPP 560
P H P P+HH G + M PPP
Sbjct: 268 PGEHMPPPPMHHEPGEH-MPPPP 289
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 492 PTTHGAPYPVHHGVGGYSMAPPP 560
P H P P+HH G + M PPP
Sbjct: 281 PGEHMPPPPMHHEPGEH-MPPPP 302
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 492 PTTHGAPYPVHHGVGGYSMAPPP 560
P H P P+HH G + M PPP
Sbjct: 294 PGEHMPPPPMHHEPGEH-MPPPP 315
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 492 PTTHGAPYPVHHGVGGYSMAPPP 560
P H P P+HH G + M PPP
Sbjct: 307 PGEHMPPPPMHHEPGEH-MPPPP 328
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 492 PTTHGAPYPVHHGVGGYSMAPPP 560
P H P P+HH G + M PPP
Sbjct: 320 PGEHMPPPPMHHEPGEH-MPPPP 341
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +2
Query: 296 YPATQGCAIPDNSGCSIPDNSGCAIPDNSGSTIPSCSECAIP 421
+ Q I DN+ CS+P S + S S + A+P
Sbjct: 687 FSVDQNNVISDNTDCSLPKPSNSKLSSISSDGDASSNRMAVP 728
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/62 (29%), Positives = 22/62 (35%)
Frame = +3
Query: 324 PTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTH 503
P G Y + GA Y +Q Y + P + P PTT P PTT
Sbjct: 900 PIIDGVDYLSCNGACYNPSQ---YVCSDGSLSPNTVTTTKATTTFTPTPTTTTTPTPTTT 956
Query: 504 GA 509
A
Sbjct: 957 SA 958
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 9.5
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Frame = -1
Query: 618 GARLRGSVPRVLGSPHSGLQGVEPSSILLHHD-----GLGKAHRAL--SGMVHPAL 472
GA+ RG L S S L+G E IL + G GKA ++ S ++ PAL
Sbjct: 181 GAKFRGDFEERLKSVLSDLEGAEGKVILFVDEMHLLLGFGKAEGSIDASNLLKPAL 236
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,665,682
Number of Sequences: 5004
Number of extensions: 58226
Number of successful extensions: 280
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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