Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_O12
         (497 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p pro...   239   2e-63
AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC...   239   2e-63
Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal prot...   235   2e-62
U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal prot...   235   2e-62
AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p pro...   235   2e-62
AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB...   235   2e-62
AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA...   235   2e-62
X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal prot...   179   2e-45
BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p pro...    59   4e-09
AJ012588-1|CAA10070.1|  480|Drosophila melanogaster Notchless pr...    28   8.1  

>BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p
           protein.
          Length = 147

 Score =  239 bits (584), Expect = 2e-63
 Identities = 109/136 (80%), Positives = 119/136 (87%)
 Frame = +2

Query: 62  YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGXYLMPNIG 241
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKG YLMPNIG
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71

Query: 242 YGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLS 421
           YGSNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS
Sbjct: 72  YGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLS 131

Query: 422 IRVTNAAARLRSQENE 469
           +R+TN   RLRSQENE
Sbjct: 132 VRLTNPNGRLRSQENE 147


>AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC,
           isoform C protein.
          Length = 147

 Score =  239 bits (584), Expect = 2e-63
 Identities = 109/136 (80%), Positives = 119/136 (87%)
 Frame = +2

Query: 62  YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGXYLMPNIG 241
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKG YLMPNIG
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71

Query: 242 YGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLS 421
           YGSNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS
Sbjct: 72  YGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLS 131

Query: 422 IRVTNAAARLRSQENE 469
           +R+TN   RLRSQENE
Sbjct: 132 VRLTNPNGRLRSQENE 147


>Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  235 bits (576), Expect = 2e-62
 Identities = 108/134 (80%), Positives = 117/134 (87%)
 Frame = +2

Query: 68  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGXYLMPNIGYG 247
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKG YLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 248 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 427
           SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R
Sbjct: 61  SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120

Query: 428 VTNAAARLRSQENE 469
           +TN   RLRSQENE
Sbjct: 121 LTNPNGRLRSQENE 134


>U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  235 bits (576), Expect = 2e-62
 Identities = 108/134 (80%), Positives = 117/134 (87%)
 Frame = +2

Query: 68  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGXYLMPNIGYG 247
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKG YLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 248 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 427
           SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R
Sbjct: 61  SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120

Query: 428 VTNAAARLRSQENE 469
           +TN   RLRSQENE
Sbjct: 121 LTNPNGRLRSQENE 134


>AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p
           protein.
          Length = 134

 Score =  235 bits (576), Expect = 2e-62
 Identities = 108/134 (80%), Positives = 117/134 (87%)
 Frame = +2

Query: 68  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGXYLMPNIGYG 247
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKG YLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 248 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 427
           SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R
Sbjct: 61  SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120

Query: 428 VTNAAARLRSQENE 469
           +TN   RLRSQENE
Sbjct: 121 LTNPNGRLRSQENE 134


>AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB,
           isoform B protein.
          Length = 134

 Score =  235 bits (576), Expect = 2e-62
 Identities = 108/134 (80%), Positives = 117/134 (87%)
 Frame = +2

Query: 68  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGXYLMPNIGYG 247
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKG YLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 248 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 427
           SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R
Sbjct: 61  SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120

Query: 428 VTNAAARLRSQENE 469
           +TN   RLRSQENE
Sbjct: 121 LTNPNGRLRSQENE 134


>AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA,
           isoform A protein.
          Length = 134

 Score =  235 bits (576), Expect = 2e-62
 Identities = 108/134 (80%), Positives = 117/134 (87%)
 Frame = +2

Query: 68  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGXYLMPNIGYG 247
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKG YLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 248 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 427
           SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R
Sbjct: 61  SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120

Query: 428 VTNAAARLRSQENE 469
           +TN   RLRSQENE
Sbjct: 121 LTNPNGRLRSQENE 134


>X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 133

 Score =  179 bits (436), Expect = 2e-45
 Identities = 84/120 (70%), Positives = 96/120 (80%)
 Frame = +2

Query: 68  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGXYLMPNIGYG 247
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRV RRFKG YLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYG 60

Query: 248 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 427
           SNK+TRHMLP GF+K LVHNV+ELE+L+MQN +   E+    S  + K I+ERA+QLS+R
Sbjct: 61  SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNPRLLREMP-TASPPRSKEIIERAKQLSLR 119


>BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p
           protein.
          Length = 126

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 37/98 (37%), Positives = 51/98 (52%)
 Frame = +1

Query: 184 Y*QQSPQAVQGSILDAQHWLRFQQEDPSYAPKWIP*GPSSQC*RAGNLDDAKQEVLRRDR 363
           Y QQS   +QG++ DAQH LR +Q  P +A   I   P +Q  RAG    A+  +LRRDR
Sbjct: 7   YRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEVPGAQRARAGGPAHAEPRLLRRDR 66

Query: 364 SWCLFEEAEADRGKSPAAQHQSDECGRSPPLPGE*INI 477
              L +EA+ D     AA     +  RSP    E +++
Sbjct: 67  PRRLLQEAQGDCRARQAAVGPPHQPQRSPAFSRERVSL 104


>AJ012588-1|CAA10070.1|  480|Drosophila melanogaster Notchless
           protein protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -2

Query: 295 DLTESIWEHMTGLLVGTVTNVGHQVXTLEPPADSVVNTSRFTPI 164
           D T  +W    G+L  T +   H V  +    D V+ T  F P+
Sbjct: 263 DRTVKMWRAADGILCRTFSGQAHWVNNIALSTDYVLRTGPFHPV 306


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,167,904
Number of Sequences: 53049
Number of extensions: 429772
Number of successful extensions: 1344
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)