Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_O11
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.5  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   5.9  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   5.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   7.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   7.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   7.8  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 341 NVIYMGRRGLFNTSTDVKIAYLTGL 415
           NV Y G + +FNT +  KI    G+
Sbjct: 293 NVQYQGVQDIFNTESIAKIMSKNGV 317


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 423 ESLVKTFLCVLMSPVTVVLSEMHVSED 503
           +++V  ++  LM  +     E+H+SED
Sbjct: 23  DTVVAKYMEYLMPDIMPCADELHISED 49


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 423 ESLVKTFLCVLMSPVTVVLSEMHVSED 503
           +++V  ++  LM  +     E+H+SED
Sbjct: 23  DTVVAKYMEYLMPDIMPCADELHISED 49


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 257 VPVTTYVFGPSNPDHVHHYCEEGSEI 334
           V VT  +    NP    ++C +GS++
Sbjct: 267 VGVTAAIPTSENPADYRYFCPDGSKV 292


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 257 VPVTTYVFGPSNPDHVHHYCEEGSEI 334
           V VT  +    NP    ++C +GS++
Sbjct: 267 VGVTAAIPTSENPADYRYFCPDGSKV 292


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 257 VPVTTYVFGPSNPDHVHHYCEEGSEI 334
           V VT  +    NP    ++C +GS++
Sbjct: 267 VGVTAAIPTSENPADYRYFCPDGSKV 292


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,076
Number of Sequences: 438
Number of extensions: 4075
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)