Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_O08
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098505-1|AAC67415.1|  536|Caenorhabditis elegans Hypothetical ...   151   4e-37
Z82056-1|CAB04854.1|  325|Caenorhabditis elegans Hypothetical pr...    32   0.31 
Z48045-11|CAM33500.1|  887|Caenorhabditis elegans Hypothetical p...    32   0.31 
Z48045-10|CAA88101.2|  849|Caenorhabditis elegans Hypothetical p...    32   0.31 
Z74029-1|CAA98431.1|  293|Caenorhabditis elegans Hypothetical pr...    31   0.54 
U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,...    31   0.71 
U58761-4|AAB00715.1|  631|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U40800-3|AAA81490.1|  467|Caenorhabditis elegans Squashed vulva ...    29   2.9  
AY147933-1|AAN39843.1|  467|Caenorhabditis elegans UDP-glucuroni...    29   2.9  
Z68880-9|CAA93099.1|  255|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z68879-12|CAA93091.1|  255|Caenorhabditis elegans Hypothetical p...    29   3.8  
L19249-1|AAC37167.1|  303|Caenorhabditis elegans homeobox protei...    29   3.8  
L14429-3|AAA28218.1|  305|Caenorhabditis elegans C.elegans homeo...    29   3.8  
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U41023-1|AAA82340.1|  569|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    27   8.7  

>AF098505-1|AAC67415.1|  536|Caenorhabditis elegans Hypothetical
           protein Y71H10A.2 protein.
          Length = 536

 Score =  151 bits (366), Expect = 4e-37
 Identities = 68/166 (40%), Positives = 108/166 (65%)
 Frame = +2

Query: 149 SVAEYYAGKSIFITGATGFMGKVLVEKLLKSCPGLNKLYLLMRPKKGQSSKERLDDFLGF 328
           SV + YAG S+ +TG TGF+GKV+VEKLL +   +  +YL++R +KG++ +ERL   L  
Sbjct: 4   SVRDVYAGSSVLLTGGTGFLGKVIVEKLLWTIDDIQNIYLMIRTRKGKNPQERLSGLLHD 63

Query: 329 KLFGPLQKENPKCFEKLHVVPGDILMDDLGISIADRELIQRECQVIFHCAACVRFDMFLR 508
            LF  +++E P+ F+KL  + GD+++++LG+   D  LI+    V+ H AA V+FD  LR
Sbjct: 64  PLFNRIRQEKPEAFDKLKAIGGDMMVENLGMDPEDVMLIRDNVNVVIHSAATVKFDEHLR 123

Query: 509 DAVNLNTVATKRVLELAKDFNNLEAFIHVSTSYCRCELDLLEEKLY 646
            AV +N + TKR+++L     +L+  +HVST+Y  C+     EK+Y
Sbjct: 124 AAVTMNVIGTKRIIDLCHQIKDLKVLVHVSTAYANCDRFETTEKIY 169


>Z82056-1|CAB04854.1|  325|Caenorhabditis elegans Hypothetical
           protein T26H5.3 protein.
          Length = 325

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -3

Query: 184 ENRFARVVFGYASRWRHFQLFSLKFFLI 101
           ENRF  ++FG  S+WRHF+ +++ F  I
Sbjct: 113 ENRF-HILFGQNSKWRHFRKYAIVFSYI 139


>Z48045-11|CAM33500.1|  887|Caenorhabditis elegans Hypothetical
           protein C41C4.5b protein.
          Length = 887

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 563 DFNNLEAFIHVSTSYCRCELDLLEEKLYP 649
           D NN   F+++ TS C C+LD + + L+P
Sbjct: 242 DTNNTAGFMNLHTSRCLCQLDTVSKALWP 270


>Z48045-10|CAA88101.2|  849|Caenorhabditis elegans Hypothetical
           protein C41C4.5a protein.
          Length = 849

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 563 DFNNLEAFIHVSTSYCRCELDLLEEKLYP 649
           D NN   F+++ TS C C+LD + + L+P
Sbjct: 204 DTNNTAGFMNLHTSRCLCQLDTVSKALWP 232


>Z74029-1|CAA98431.1|  293|Caenorhabditis elegans Hypothetical
           protein C45B11.3 protein.
          Length = 293

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = +2

Query: 161 YYAGKSIFITGATGFMGKVLVEKLLK 238
           ++AGK++FITGA+  +GK +  KL K
Sbjct: 10  FFAGKTVFITGASRGIGKEIALKLAK 35


>U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,
           short chain protein27 protein.
          Length = 816

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
 Frame = +2

Query: 185 ITGATGFMGKVLVEKLLKSCPGLNKLYLLMRP-KKGQSSKERLDDFLGFKLFGPLQKENP 361
           ITG T  +GK  +E+L K+  GL K YL+ R   K  ++K+ L +  G ++   +     
Sbjct: 508 ITGGTDGIGKAYIEELCKT-RGLKKFYLIGRNIDKLNNTKKELVEQHGCEVMCHVHD--- 563

Query: 362 KCFEK--LHVVPGDILMDDLGISI 427
             FEK  L  +P D+   D+GI I
Sbjct: 564 --FEKDDLSALPKDLETLDVGILI 585


>U58761-4|AAB00715.1|  631|Caenorhabditis elegans Hypothetical
           protein C01F1.3a protein.
          Length = 631

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +2

Query: 446 QRECQVIFHCAA-CVRFDMF--LRDAVNLNTVATKRVLELAKDFNNLEAFIHVSTSYCRC 616
           Q E   + H AA C     +    +AV  N ++  + LE  + +  ++ F+H+ST     
Sbjct: 78  QNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKIKRFVHISTDEVYG 137

Query: 617 ELDLLEEK 640
           + DL E +
Sbjct: 138 DSDLSENE 145


>U40800-3|AAA81490.1|  467|Caenorhabditis elegans Squashed vulva
           protein 1 protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 140 PSASVAEYYAGKSIFITGATGFMGKVLVEKLL 235
           PS         K I ITG  GF+G  LV+KL+
Sbjct: 126 PSVRYRNEETRKRILITGGAGFVGSHLVDKLM 157


>AY147933-1|AAN39843.1|  467|Caenorhabditis elegans UDP-glucuronic
           acid decarboxylase protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 140 PSASVAEYYAGKSIFITGATGFMGKVLVEKLL 235
           PS         K I ITG  GF+G  LV+KL+
Sbjct: 126 PSVRYRNEETRKRILITGGAGFVGSHLVDKLM 157


>Z68880-9|CAA93099.1|  255|Caenorhabditis elegans Hypothetical
           protein K08F4.9 protein.
          Length = 255

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +2

Query: 167 AGKSIFITGATGFMGKVLVEKLLKSCPGLNKL 262
           A K+IFITGA   +G  LV +LLK  PG+  L
Sbjct: 2   APKTIFITGANRGIGLGLVRELLK-VPGVEAL 32


>Z68879-12|CAA93091.1|  255|Caenorhabditis elegans Hypothetical
           protein K08F4.9 protein.
          Length = 255

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +2

Query: 167 AGKSIFITGATGFMGKVLVEKLLKSCPGLNKL 262
           A K+IFITGA   +G  LV +LLK  PG+  L
Sbjct: 2   APKTIFITGANRGIGLGLVRELLK-VPGVEAL 32


>L19249-1|AAC37167.1|  303|Caenorhabditis elegans homeobox protein
           protein.
          Length = 303

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = -1

Query: 339 PNNLNPRKSSNLSLLLCPFLGLINR*SLFKPGHDFNSFSTNTFPMKPVAP 190
           P +  P  S+ +     PF   I R +LF P    NS    T P +P  P
Sbjct: 35  PTSCIPSTSTGMLSPNLPFSATIPRVNLFPPSQPANSLILPTIPAQPFIP 84


>L14429-3|AAA28218.1|  305|Caenorhabditis elegans C.elegans homeobox
           protein 23 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = -1

Query: 339 PNNLNPRKSSNLSLLLCPFLGLINR*SLFKPGHDFNSFSTNTFPMKPVAP 190
           P +  P  S+ +     PF   I R +LF P    NS    T P +P  P
Sbjct: 37  PTSCIPSTSTGMLSPNLPFSATIPRVNLFPPSQPANSLILPTIPAQPFIP 86


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
            W02C12.1 protein.
          Length = 1372

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -1

Query: 495  SNLTQAAQWNMTWHSRCISSLSAIDMPKSSISMSPG 388
            +N     ++N +WH+ CI      D+P       PG
Sbjct: 1151 TNQCATGEYNCSWHANCIDLPDENDVPSYECRCKPG 1186


>U41023-1|AAA82340.1|  569|Caenorhabditis elegans Hypothetical
           protein F53H8.3 protein.
          Length = 569

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 461 PGTPAVSALCLLLICPSHP 405
           PG PA++ +C+L  CP  P
Sbjct: 187 PGLPALALVCILPFCPESP 205


>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +2

Query: 140  PSASVAEYYAGKSIFITGATGFMGKVLVEKLLKSCPGLNKL 262
            P AS++EY AGKS        FM  +     L     +NKL
Sbjct: 1972 PPASMSEYAAGKSKDFADTLNFMAPLSTRNPLVFTEAMNKL 2012


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,249,150
Number of Sequences: 27780
Number of extensions: 293917
Number of successful extensions: 765
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)