Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_O07
         (327 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358339-1|AAQ88705.1|  545|Homo sapiens PPFL826 protein.              29   3.3  
AY013707-1|AAG40096.2|  545|Homo sapiens LZP protein.                  29   3.3  
AK096435-1|BAC04788.1|  545|Homo sapiens protein ( Homo sapiens ...    29   3.3  
BC115398-1|AAI15399.1|  357|Homo sapiens TEAD1 protein protein.        28   7.7  

>AY358339-1|AAQ88705.1|  545|Homo sapiens PPFL826 protein.
          Length = 545

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
 Frame = +1

Query: 82  LTSGLIPNILTSPLHVLTSKPLDILDNPLRIFGD----KPVSGALNTLGLRPARSVDHVE 249
           ++ G +PN+  SPL ++ S+   I    L IF D    +P   AL TL LR +     +E
Sbjct: 364 ISEGYVPNLRNSPLEIM-SRNHGIFPFTLEIFKDNEFEEPYREALPTLKLRDSLYFG-IE 421

Query: 250 LVIH 261
            V+H
Sbjct: 422 PVVH 425


>AY013707-1|AAG40096.2|  545|Homo sapiens LZP protein.
          Length = 545

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
 Frame = +1

Query: 82  LTSGLIPNILTSPLHVLTSKPLDILDNPLRIFGD----KPVSGALNTLGLRPARSVDHVE 249
           ++ G +PN+  SPL ++ S+   I    L IF D    +P   AL TL LR +     +E
Sbjct: 364 ISEGYVPNLRNSPLEIM-SRNHGIFPFTLEIFKDNEFEEPYREALPTLKLRDSLYFG-IE 421

Query: 250 LVIH 261
            V+H
Sbjct: 422 PVVH 425


>AK096435-1|BAC04788.1|  545|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39116 fis, clone NTONG2006301, highly similar to
           Mus musculus EF-9 mRNA. ).
          Length = 545

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
 Frame = +1

Query: 82  LTSGLIPNILTSPLHVLTSKPLDILDNPLRIFGD----KPVSGALNTLGLRPARSVDHVE 249
           ++ G +PN+  SPL ++ S+   I    L IF D    +P   AL TL LR +     +E
Sbjct: 364 ISEGYVPNLRNSPLEIM-SRNHGIFPFTLEIFKDNEFEEPYREALPTLKLRDSLYFG-IE 421

Query: 250 LVIH 261
            V+H
Sbjct: 422 PVVH 425


>BC115398-1|AAI15399.1|  357|Homo sapiens TEAD1 protein protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -3

Query: 262 NELLVRH-DLQTGQA*DLKYLELH*QVYLRRFSKDYPVYLAV 140
           NEL+ R+  L+TG+    K +  H QV  RR S+D+   L V
Sbjct: 55  NELIARYIKLRTGKTRTRKQVSSHIQVLARRKSRDFHSKLKV 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,294,093
Number of Sequences: 237096
Number of extensions: 666135
Number of successful extensions: 1364
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1364
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)