Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_O07
         (327 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68004-2|CAA91982.1|  677|Caenorhabditis elegans Hypothetical pr...    27   3.2  
Z92972-2|CAB07487.1|  336|Caenorhabditis elegans Hypothetical pr...    26   7.4  
Z46787-11|CAA86750.1|  610|Caenorhabditis elegans Hypothetical p...    26   7.4  
AL021566-4|CAA16505.1|  336|Caenorhabditis elegans Hypothetical ...    26   7.4  
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr...    25   9.7  
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr...    25   9.7  

>Z68004-2|CAA91982.1|  677|Caenorhabditis elegans Hypothetical
           protein F47B10.2 protein.
          Length = 677

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
 Frame = +1

Query: 25  SHTRYCW*LSGVAFVYSAPLTSGLIPNILTSPLHVLTSKPLDILDNPLRIFGDKP--VSG 198
           SH R C  +     +   P   G++ + +     ++T++     DNPL +F D+   +SG
Sbjct: 400 SH-RNCTKVQDAYTLRCVPQVHGVVHDTIEFVREIITTEMNSATDNPL-VFADREEIISG 457

Query: 199 ALNTLGLRPARSVDHVELVI 258
             N  G  PA+++D + + +
Sbjct: 458 G-NFHGEYPAKALDFLAIAV 476


>Z92972-2|CAB07487.1|  336|Caenorhabditis elegans Hypothetical
           protein T19C9.2 protein.
          Length = 336

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 55  GVAFVYSAPLTSGLIPNILTSPLHVLTSKPLDILDNPLRIF 177
           GV FVY A L   ++  +  S + +  S+   + +N  RI+
Sbjct: 105 GVPFVYQAVLGGAMLAGVAGSYVFLFESRSSSLPENRFRIY 145


>Z46787-11|CAA86750.1|  610|Caenorhabditis elegans Hypothetical
           protein C16C10.12 protein.
          Length = 610

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 85  TSGLIPNILTSPLHVLTSKPLDILDNPLRIFGDKPVSG 198
           T GL+  I       LT    ++L NP  +F D+P SG
Sbjct: 173 TPGLVKGISGGEARRLTFA-CELLSNPSLLFADEPTSG 209


>AL021566-4|CAA16505.1|  336|Caenorhabditis elegans Hypothetical
           protein F08E10.6 protein.
          Length = 336

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 55  GVAFVYSAPLTSGLIPNILTSPLHVLTSKPLDILDNPLRIF 177
           GV FVY A L   ++  +  S + +  S+   + +N  RI+
Sbjct: 105 GVPFVYQAVLGGSMLAGVAGSYVFLFESRSSSLPENRFRIY 145


>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
           protein T19D12.4b protein.
          Length = 1015

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 112 TSPLHVLTSKPLDILDNPLRIFGDKPVSGALNTLG 216
           T+P    T+KP +  +N L       +SG  +TLG
Sbjct: 854 TTPAPTTTNKPANFWNNNLYTVDQTMMSGVFDTLG 888


>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
           protein T19D12.4a protein.
          Length = 1028

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 112 TSPLHVLTSKPLDILDNPLRIFGDKPVSGALNTLG 216
           T+P    T+KP +  +N L       +SG  +TLG
Sbjct: 867 TTPAPTTTNKPANFWNNNLYTVDQTMMSGVFDTLG 901


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,056,526
Number of Sequences: 27780
Number of extensions: 103052
Number of successful extensions: 197
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)