Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_O06
(649 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 290 2e-77
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 273 2e-72
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 246 4e-64
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 237 2e-61
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 217 1e-55
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 213 2e-54
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 209 4e-53
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 208 1e-52
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 197 2e-49
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 188 8e-47
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 181 1e-44
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 172 7e-42
UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 170 2e-41
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 162 8e-39
UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome... 146 5e-34
UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome... 98 1e-19
UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1; Guil... 93 5e-18
UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10... 89 9e-17
UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 87 3e-16
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 85 1e-15
UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 84 2e-15
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 83 7e-15
UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 81 2e-14
UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 81 3e-14
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 80 4e-14
UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 80 5e-14
UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2; ... 79 9e-14
UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 77 3e-13
UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 77 3e-13
UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1; ... 76 9e-13
UniRef50_A2BN27 Cluster: Proteasome beta; n=3; Desulfurococcales... 76 9e-13
UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 76 9e-13
UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;... 75 1e-12
UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1; Ence... 74 3e-12
UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giar... 71 2e-11
UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;... 71 2e-11
UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1; En... 70 6e-11
UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7; Halobac... 70 6e-11
UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2; Dict... 69 1e-10
UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fung... 69 1e-10
UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 68 2e-10
UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Vi... 68 2e-10
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 67 3e-10
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 67 3e-10
UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;... 66 5e-10
UniRef50_P23724 Cluster: Proteasome component C5; n=23; Fungi/Me... 66 5e-10
UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome... 66 7e-10
UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanob... 65 2e-09
UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 64 2e-09
UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryp... 64 2e-09
UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:... 64 3e-09
UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Or... 64 3e-09
UniRef50_Q8VHB3 Cluster: Proteasomal subunit beta type III; n=4;... 63 6e-09
UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;... 63 6e-09
UniRef50_Q59PN5 Cluster: Putative uncharacterized protein; n=2; ... 63 6e-09
UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 63 6e-09
UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of str... 62 9e-09
UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7; Tr... 62 1e-08
UniRef50_A6R393 Cluster: Proteasome component C5; n=5; Ascomycot... 61 2e-08
UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 61 2e-08
UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precurso... 59 1e-07
UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1; Tric... 56 1e-06
UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A precur... 55 1e-06
UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4... 55 1e-06
UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, wh... 55 2e-06
UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2; Caen... 53 5e-06
UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precurso... 53 7e-06
UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precurso... 52 9e-06
UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precurso... 52 1e-05
UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4... 52 1e-05
UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2; Olig... 51 2e-05
UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precurso... 50 4e-05
UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome s... 50 6e-05
UniRef50_A2DD57 Cluster: Proteasome subunit beta type; n=1; Tric... 50 6e-05
UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1; Guil... 49 1e-04
UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1; Usti... 48 1e-04
UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 48 2e-04
UniRef50_Q5CU00 Cluster: Pre3p/proteasome regulatory subunit bet... 48 2e-04
UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2; Ca... 48 2e-04
UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5; Plas... 48 3e-04
UniRef50_Q23FB2 Cluster: Proteasome, putative; n=5; Oligohymenop... 48 3e-04
UniRef50_Q00826 Cluster: Probable proteasome subunit beta type-2... 47 5e-04
UniRef50_P22141 Cluster: Proteasome component C11; n=36; Ascomyc... 46 6e-04
UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n... 46 8e-04
UniRef50_Q9XUV0 Cluster: Proteasome subunit beta type; n=2; Caen... 46 8e-04
UniRef50_Q7QLL8 Cluster: Proteasome subunit beta type; n=4; Endo... 46 0.001
UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2; Cryp... 45 0.001
UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1; Para... 45 0.002
UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lambli... 44 0.002
UniRef50_Q10329 Cluster: Probable proteasome subunit alpha type-... 44 0.002
UniRef50_A1RWY6 Cluster: Proteasome endopeptidase complex; n=1; ... 44 0.003
UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7; ... 43 0.006
UniRef50_Q9ZRY9 Cluster: 20S proteasome beta subunit; n=8; Magno... 43 0.007
UniRef50_Q7QT27 Cluster: Proteasome subunit beta type; n=2; Giar... 43 0.007
UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5; Plas... 42 0.017
UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B precur... 42 0.017
UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core ... 41 0.022
UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giar... 41 0.030
UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family pro... 41 0.030
UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1; En... 40 0.052
UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1; ... 39 0.091
UniRef50_UPI00003C07D6 Cluster: PREDICTED: similar to Proteasome... 38 0.21
UniRef50_A5LHX3 Cluster: Proteasome subunit beta type-11 precurs... 38 0.21
UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40; F... 38 0.28
UniRef50_Q08058 Cluster: Coenzyme Q-binding protein COQ10, mitoc... 38 0.28
UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;... 37 0.37
UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome... 37 0.37
UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2; Ostr... 36 0.64
UniRef50_A2E5C0 Cluster: Family T1, proteasome alpha subunit, th... 36 1.1
UniRef50_Q09544 Cluster: ATP synthase delta chain, mitochondrial... 36 1.1
UniRef50_A4H5A4 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_A6R7Q1 Cluster: Proteasome component PRE3; n=1; Ajellom... 35 1.5
UniRef50_Q0VN61 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q4SM94 Cluster: Chromosome 3 SCAF14553, whole genome sh... 34 2.6
UniRef50_A2QVK6 Cluster: Catalytic activity: PRE2 has a chymotry... 34 2.6
UniRef50_UPI0000F2C314 Cluster: PREDICTED: hypothetical protein;... 33 4.5
UniRef50_A0NHA5 Cluster: Proteasome subunit alpha type; n=1; Ano... 33 7.9
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 290 bits (712), Expect = 2e-77
Identities = 127/182 (69%), Positives = 158/182 (86%)
Frame = +2
Query: 101 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 280
MSI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 281 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 460
QTV QRLKFR+NLYELKE R ++P T +M++NLLYE+RFGPY+ EPVIAGLDP +P+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 461 VCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAI 640
+C++DLIGCP +DFVVSGTC+EQ+YGMCE+LWEPN+ PD LFETISQA++NA DRDA+
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAV 180
Query: 641 SG 646
SG
Sbjct: 181 SG 182
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 273 bits (670), Expect = 2e-72
Identities = 122/182 (67%), Positives = 148/182 (81%)
Frame = +2
Query: 101 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 280
MSILA+NG AV+ M G+DC AIA D RFG+ QT+ST+F KV+ +GP LYVG PGLATD
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 281 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 460
QTVFQRL+FR N+YEL+ENR ++P+T + MLSNLLYERRFGPYF+EPV+AG+D ++PY
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 461 VCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAI 640
V MDLIGC E DFVVSGTC+EQ+YGMCE LWE N+ ELFE ISQ ++NA +RDAI
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAI 180
Query: 641 SG 646
SG
Sbjct: 181 SG 182
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 246 bits (602), Expect = 4e-64
Identities = 110/183 (60%), Positives = 147/183 (80%)
Frame = +2
Query: 101 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 280
MSI YNG AVVAM G++C AIA+D+R G+Q QTV+T+F +VF++ LY+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 281 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 460
QT++QRL FR LY+L+E R M+P+TF++++S LLYE+RFGPYF +PVIAGL DN+P+
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGE-DNEPF 119
Query: 461 VCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAI 640
+C MD IG +DFVVSGT SE LYG CE++++PN++P+ELFETISQAL ++ DRD +
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCL 179
Query: 641 SGW 649
SGW
Sbjct: 180 SGW 182
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 237 bits (579), Expect = 2e-61
Identities = 107/182 (58%), Positives = 145/182 (79%)
Frame = +2
Query: 101 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 280
MSI++YNGGA++AMKG++ VAIA D+ FGIQAQ V+T+F ++F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDV 60
Query: 281 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 460
Q V Q LKF++NLYELKE + ++P TF++M++N LYE+ FGPY+ +PVIAGLD +P+
Sbjct: 61 QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120
Query: 461 VCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAI 640
C++DLIG P +DFVV+G+ +EQ+YGMCE+LWEPN+ P+ FETIS A++NA D A
Sbjct: 121 SCSLDLIGFPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHPFETISPAMLNAVDWGAG 180
Query: 641 SG 646
SG
Sbjct: 181 SG 182
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 217 bits (531), Expect = 1e-55
Identities = 99/189 (52%), Positives = 137/189 (72%), Gaps = 1/189 (0%)
Frame = +2
Query: 86 FYITNMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQ-TVSTNFPKVFQMGPTLYVGLP 262
F+ I +YNGGA+VAM G+ CVAIA DKR G+ Q TVS+NFPK F++ + +
Sbjct: 11 FHYNFGDITSYNGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAAS 70
Query: 263 GLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDP 442
GLATD QT+ + F++N+Y+L+ ++ M KT S M+ ++LY RRFGP+F++ VIAGLD
Sbjct: 71 GLATDVQTLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDT 130
Query: 443 YDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNA 622
D+ PY+ DL+G P P DFVV+GTCSEQLYG+CEAL++P + P++LFET+SQ L+
Sbjct: 131 -DSSPYITCFDLVGAPCTPTDFVVAGTCSEQLYGVCEALFKPGMDPEQLFETVSQCLMAG 189
Query: 623 ADRDAISGW 649
DRD +SGW
Sbjct: 190 IDRDCLSGW 198
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 213 bits (521), Expect = 2e-54
Identities = 95/183 (51%), Positives = 129/183 (70%)
Frame = +2
Query: 101 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 280
MSI++Y GG VVAM G +CV IA+D R G Q T++T+ KV ++ +YVGL G +D
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 281 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 460
+TV +++ FR NLYEL+ENR ++P+ S M+SNL Y+ RFG YF EP++AGLD N+PY
Sbjct: 61 RTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDD-TNKPY 119
Query: 461 VCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAI 640
+C MD IGC + P DFV GT E L G+CE W N+KPDELFE +Q++++ +RDA
Sbjct: 120 ICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAA 179
Query: 641 SGW 649
SGW
Sbjct: 180 SGW 182
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 209 bits (511), Expect = 4e-53
Identities = 90/183 (49%), Positives = 132/183 (72%)
Frame = +2
Query: 101 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 280
MSIL Y+GG+ +AM G++C + +D R G Q +T+S PK+ + + +GL GL TD
Sbjct: 1 MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQ 60
Query: 281 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 460
QT Q++ FR +Y+L+E R + K F+A++S++LYE RFGP+F+EPVI +D + Y
Sbjct: 61 QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY 120
Query: 461 VCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAI 640
+C DLIG P EPED+V +GTC+E L+GMCEALW P L+P+ELFE +QA+++A DRD++
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSL 180
Query: 641 SGW 649
SG+
Sbjct: 181 SGY 183
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 208 bits (507), Expect = 1e-52
Identities = 93/180 (51%), Positives = 130/180 (72%), Gaps = 1/180 (0%)
Frame = +2
Query: 107 ILAYNGGAVVAMKGQDCVAIATDKRFGI-QAQTVSTNFPKVFQMGPTLYVGLPGLATDTQ 283
++ YNG A+VAM G CV IA+D R+G+ Q QTV K FQ+ +VG+ GLATD Q
Sbjct: 4 LMDYNGSAIVAMAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQ 63
Query: 284 TVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYV 463
T+ Q L FR+ L+ L+E R M+P+T ++S++LYE+RFGPYF EPV+AGLD D+ P++
Sbjct: 64 TMAQLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDK-DHNPFL 122
Query: 464 CNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAIS 643
C D IG ++ +DFVVSGT SEQL+G+CE+ W P + DELFET++Q L++A DRD ++
Sbjct: 123 CAFDFIGAMSKAQDFVVSGTSSEQLFGVCESFWRPKMNKDELFETLAQCLLSAVDRDCLA 182
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 197 bits (480), Expect = 2e-49
Identities = 88/183 (48%), Positives = 126/183 (68%), Gaps = 1/183 (0%)
Frame = +2
Query: 104 SILAYNGGAVVAMKGQDCVAIATDKRFGIQA-QTVSTNFPKVFQMGPTLYVGLPGLATDT 280
SI+ YNGGA++AMKG++CVA ATD R G +T+ST+F KV + +G GLATD
Sbjct: 1 SIMTYNGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVIRPSSKTLMGFSGLATDI 60
Query: 281 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 460
T+ +KF+ NLY L+E R + K S M +++LY +RF PYF+EP++AGLD +N P+
Sbjct: 61 HTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLD-NNNVPF 119
Query: 461 VCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAI 640
+ DLIGC + +F +SGT QL+G+CE+ + P+L+PDEL E +SQ +++ DRDA
Sbjct: 120 IAGYDLIGCLSVCSEFAISGTADNQLFGICESYYRPDLEPDELMEIVSQCMLSGIDRDAF 179
Query: 641 SGW 649
SGW
Sbjct: 180 SGW 182
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 188 bits (459), Expect = 8e-47
Identities = 97/194 (50%), Positives = 126/194 (64%), Gaps = 12/194 (6%)
Frame = +2
Query: 104 SILAYNGGAVVAMKGQDCVAIATDKRFGIQA-QTVSTNFPKVFQMGPTLYVGLPGLATDT 280
SI YNGG V+ M G CVAIA D R G TVSTNF K+F+M +YVGL GLATD
Sbjct: 3 SIFNYNGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDI 62
Query: 281 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAG------LDP 442
QT+++ L++R+NLYE+++ M F+ MLS++LY RF PYF+ P++ G LD
Sbjct: 63 QTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDD 122
Query: 443 YDN-----QPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQ 607
+PY+ DLIG E +DFVV+G SEQLYGMCE+L+ + D LFETISQ
Sbjct: 123 EGKKVCSFEPYLTAYDLIGAKCETKDFVVNGVTSEQLYGMCESLYIKDQDKDGLFETISQ 182
Query: 608 ALVNAADRDAISGW 649
L++A DRD +SGW
Sbjct: 183 CLLSALDRDCLSGW 196
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 181 bits (441), Expect = 1e-44
Identities = 84/173 (48%), Positives = 122/173 (70%), Gaps = 1/173 (0%)
Frame = +2
Query: 134 VAMKGQDCVAIATDKRFGI-QAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 310
VAM G+DCVAIA+D R GI Q QT + ++ K+ ++ L++GL GL D T+ Q+L+F+
Sbjct: 10 VAMVGKDCVAIASDLRLGINQNQTTAVDYSKLHKIHDKLWLGLTGLIADQLTLAQKLRFK 69
Query: 311 MNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCP 490
++YEL+ENR+M PK F++++S LYE+RF PY+ EPV+AGLD D +PY+ +MDLIG
Sbjct: 70 HDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDK-DGKPYITSMDLIGAD 128
Query: 491 NEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGW 649
+DFVV+G E L+G+CE+ + +L+PDELF I L +RD +SGW
Sbjct: 129 ASADDFVVAGDNVESLFGVCESFYRKDLEPDELFNVIGNCLNAGVNRDCLSGW 181
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 172 bits (418), Expect = 7e-42
Identities = 77/183 (42%), Positives = 123/183 (67%), Gaps = 1/183 (0%)
Frame = +2
Query: 104 SILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVST-NFPKVFQMGPTLYVGLPGLATDT 280
+I YNG A++ +KG DCVA+A DKR G QT++ N ++F++ + +GL GL TD
Sbjct: 3 NIWEYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDV 62
Query: 281 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 460
T +++++ + NLY L+E+R +RP+ + M+S+ LY+ RFGPYFI P+IAG + D +PY
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEA-DGKPY 121
Query: 461 VCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAI 640
+ MD IGC ++ +F ++GT S+ L G+CE +P++ DE+ + Q + +A +RDA
Sbjct: 122 LGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAY 181
Query: 641 SGW 649
SGW
Sbjct: 182 SGW 184
>UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA
SUBUNIT, theta chain - Encephalitozoon cuniculi
Length = 205
Score = 170 bits (414), Expect = 2e-41
Identities = 79/178 (44%), Positives = 113/178 (63%)
Frame = +2
Query: 116 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 295
+ GG+++AM VAI DKR G+ + TVS +F ++ ++GP LYVGLP DTQ + +
Sbjct: 7 FYGGSILAMASSKGVAIMCDKRLGMSSITVSKDFTRIHRIGPRLYVGLPAFVPDTQVLLR 66
Query: 296 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 475
+++ NL+ L+ R M P+ S+M+S LLY +R PY P++AGL D +PY+ MD
Sbjct: 67 KIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTS-DGKPYISGMD 125
Query: 476 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGW 649
IG P DFV GT + L G+CEAL+ P++ + LF T QA +NA DRDA+SGW
Sbjct: 126 CIGSIASPGDFVAVGTADKNLMGICEALYRPDMDEENLFVTCVQAFLNAIDRDALSGW 183
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 162 bits (393), Expect = 8e-39
Identities = 77/178 (43%), Positives = 113/178 (63%)
Frame = +2
Query: 116 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 295
Y+GGAVV M G+ CVAIA D R+G++ Q S NF KVFQ+ G GL +D QT+ +
Sbjct: 8 YSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAE 67
Query: 296 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 475
++K+ NLY L+E + P+ +++LY++RF PY++ P+IAG+D N YVC+ D
Sbjct: 68 KVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNS-YVCSYD 126
Query: 476 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGW 649
IG P E GT S +L GMC++ ++ ++P+EL E + Q L+ A +RDA SGW
Sbjct: 127 YIGSP-EISQVGCVGTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENRDAFSGW 183
>UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3; n=1; Equus
caballus|Rep: PREDICTED: similar to Proteasome (prosome,
macropain) subunit, beta type, 3 - Equus caballus
Length = 168
Score = 146 bits (353), Expect = 5e-34
Identities = 70/145 (48%), Positives = 100/145 (68%)
Frame = +2
Query: 203 VSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNL 382
++T+ K+F MG L + L GLAT+ QT Q LKF++NL EL E ++P T ++++NL
Sbjct: 2 LTTDLQKIFPMGEWLDISLTGLATNFQTTAQHLKFQLNLCELNEGSQIKPYTLMSVMANL 61
Query: 383 LYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALW 562
LY+++FGP + EPVIA LD P++C++DLI CP +DFVVS TC+EQ+ GMCE+L
Sbjct: 62 LYKKQFGPCYTEPVIAWLDLKTFTPFLCSLDLISCPVVTDDFVVSSTCAEQMCGMCESLG 121
Query: 563 EPNLKPDELFETISQALVNAADRDA 637
+ L ET+SQA++NA D DA
Sbjct: 122 AHHA---HLLETVSQAMLNAVDGDA 143
>UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome
subunit RC10-II; n=2; Mammalia|Rep: PREDICTED: similar
to proteasome subunit RC10-II - Ornithorhynchus anatinus
Length = 181
Score = 98.3 bits (234), Expect = 1e-19
Identities = 44/62 (70%), Positives = 54/62 (87%)
Frame = +2
Query: 104 SILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQ 283
SI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD Q
Sbjct: 26 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 85
Query: 284 TV 289
TV
Sbjct: 86 TV 87
Score = 42.3 bits (95), Expect = 0.010
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +2
Query: 527 SEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
S+ + CE+ +P+ LFETISQA++NA DRDA+SG
Sbjct: 122 SQSPHARCES---SRREPEHLFETISQAMLNAVDRDAVSG 158
>UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 200
Score = 93.1 bits (221), Expect = 5e-18
Identities = 45/164 (27%), Positives = 88/164 (53%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
GG VVA+ G+D + IA+D G + K+F++ + +G+ GL D + L
Sbjct: 5 GGCVVAILGKDSLCIASDSENGSVSYLTEFKTQKIFKLHEDIIIGIVGLLGDIYGFKEIL 64
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
++ +++ KE + M P +++S LLY++RF PY +E ++AG + +P++ +D I
Sbjct: 65 EYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGFTE-NGKPFLGTVDCI 123
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQAL 613
G + ++ G E ++ + + LW P + EL +S+++
Sbjct: 124 GAISYISNYACIGNLCENIFPLIQFLWRPGMDLKELIILVSKSM 167
>UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Archaeoglobus fulgidus
Length = 213
Score = 89.0 bits (211), Expect = 9e-17
Identities = 53/177 (29%), Positives = 88/177 (49%)
Frame = +2
Query: 116 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 295
Y G V + +D V +AT+KR + S K++Q+ + + G D Q + +
Sbjct: 9 YKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLAR 68
Query: 296 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 475
+K NLYE++ R + + + SNLL R+ PY ++ +I G+D Y ++D
Sbjct: 69 IIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIY--SID 126
Query: 476 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
IG E +D V +G+ S YG+ E + P + DE E +A+ +A RD+ SG
Sbjct: 127 PIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASG 183
>UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome, beta subunit -
Pyrobaculum aerophilum
Length = 203
Score = 87.4 bits (207), Expect = 3e-16
Identities = 51/175 (29%), Positives = 91/175 (52%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G V +K +D V +A +KR T+S+ KVF + L + G+ D QT+ + L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKIL 67
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
K YEL+ R + + +LS +++ RRF P+F E ++ G+D + P++ MD +
Sbjct: 68 KLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGID--EEGPHLIVMDPL 125
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G E +++ GT ++ + + + P++ +E + QAL A +RD +SG
Sbjct: 126 GSLIE-DNYAALGTGAKLAVAVLDTGYRPDITVEEAKKLAVQALKAAIERDPVSG 179
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 85.4 bits (202), Expect = 1e-15
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 9/187 (4%)
Frame = +2
Query: 113 AYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVF 292
A+NGG V+A+ G+D +A+D R S + PK +++ T +G G D T+
Sbjct: 31 AFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLT 90
Query: 293 QRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNM 472
+ ++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V +
Sbjct: 91 KIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDE-EGRGAVYSF 149
Query: 473 DLIGCPNEPEDFVVSGTCSEQL---------YGMCEALWEPNLKPDELFETISQALVNAA 625
D +G + + + G+ S L + E + + L ++ + + ++AA
Sbjct: 150 DPVG-SYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVFISAA 208
Query: 626 DRDAISG 646
+RD +G
Sbjct: 209 ERDVYTG 215
>UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 204
Score = 84.2 bits (199), Expect = 2e-15
Identities = 53/174 (30%), Positives = 91/174 (52%)
Frame = +2
Query: 125 GAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLK 304
G V ++ D V +A +KR +S + KV+++ + + GL D QT+ + ++
Sbjct: 6 GTTVGIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVE 65
Query: 305 FRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 484
M LYEL N + T + +LS +LYERR PY+ E V+ GLD + Y ++D IG
Sbjct: 66 AEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGSHLY--SLDPIG 123
Query: 485 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
E +D+V G+ ++ + E+ ++ ++ DE +++ A RDA SG
Sbjct: 124 AIIE-DDYVALGSGTQLAISIVESNYKKDMSLDEALSLALKSVYAAMKRDAASG 176
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 82.6 bits (195), Expect = 7e-15
Identities = 47/179 (26%), Positives = 94/179 (52%)
Frame = +2
Query: 110 LAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV 289
+++ G + ++ +D V +A DKR +S NF K+F + + + GL D +
Sbjct: 1 MSFAGATALGIRVEDGVVLAADKRMSYGGFILSRNFKKIFVINDRIGIAFAGLYGDMGGL 60
Query: 290 FQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCN 469
+ ++ +M L L+ + + + LS+LLY +F P+ +E ++ G+DP +P +
Sbjct: 61 VRIVEGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDP-GGEPKLYV 119
Query: 470 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
+D +G E ED+V +GT + +G+ E +++ + +E + +AL + RDA +G
Sbjct: 120 LDPLGSIIE-EDYVAAGTGATTAFGLLEHVYKRGMSLEEAKKAAVEALRASMARDAGTG 177
>UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2;
Euryarchaeota|Rep: Protease subunit of the proteasome -
Methanopyrus kandleri
Length = 210
Score = 81.4 bits (192), Expect = 2e-14
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G V + V +A D+R + K+F++ + V G D Q + +
Sbjct: 10 GTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDLM 69
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMD 475
+ LYEL+ NRM+ + + M+S++L+ + F PY ++ ++ G + D+ P + N+D
Sbjct: 70 RAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFN--DDDPALYNLD 127
Query: 476 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G E ED+ +G+ S YG+ EA +E + D+ E +A+ +A +RD +G
Sbjct: 128 PSGSIIE-EDYTATGSGSPTAYGVLEAEYEEGMSLDDAIEVAVRAVKSALERDTGTG 183
>UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 219
Score = 80.6 bits (190), Expect = 3e-14
Identities = 48/176 (27%), Positives = 85/176 (48%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
+G V + D V +A DKR S K+ + + + + GL D Q +
Sbjct: 24 SGTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDV 83
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
L+ + LYE+ + +++LSN+L+ +F PY ++ ++ G YD QP + +DL
Sbjct: 84 LREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGG---YDTQPRLYTLDL 140
Query: 479 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G E + + +G+ S YG+ E + +L +E + + A+ +A RDA SG
Sbjct: 141 FGSITE-DKYTATGSGSPIAYGVLEERYREDLSVEEAIKVATTAIRSAVLRDAASG 195
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 80.2 bits (189), Expect = 4e-14
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 9/186 (4%)
Frame = +2
Query: 116 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 295
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 296 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 475
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFD 153
Query: 476 LIGCPNEPEDFVVSGTCSEQL---------YGMCEALWEPNLKPDELFETISQALVNAAD 628
+G + + F G+ S L + + + L D + ++AA+
Sbjct: 154 PVG-SYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAE 212
Query: 629 RDAISG 646
RD +G
Sbjct: 213 RDVYTG 218
>UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Methanococcus jannaschii
Length = 224
Score = 79.8 bits (188), Expect = 5e-14
Identities = 46/175 (26%), Positives = 86/175 (49%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G V + D V +ATDKR + K++++ + + + G D Q + + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
LY+++ R + P + +LSN+L+ R P+ + +I G D + + ++D +
Sbjct: 66 IAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAK-LFSLDPL 124
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G NE + F +G+ S YG+ EA ++ ++ +E + AL +A +RD SG
Sbjct: 125 GGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSG 179
>UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2;
Halorubrum|Rep: Proteasome endopeptidase complex -
Halorubrum lacusprofundi ATCC 49239
Length = 243
Score = 79.0 bits (186), Expect = 9e-14
Identities = 48/175 (27%), Positives = 88/175 (50%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G V +K D V +ATD R + S + KV ++ P + + G + Q + L
Sbjct: 49 GTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLISTL 108
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
K +LYE + + M + S + NLL F Y ++P++ G+D D ++ ++D +
Sbjct: 109 KAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVD--DEGSHIYSIDAL 164
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G E E++ V+G+ S+ G+ E ++ ++ DE ++A+ +A +RD SG
Sbjct: 165 GGTTE-EEYTVTGSGSQYALGVLEQEYDDDVTVDEAKTMAAKAIQSAVERDLASG 218
>UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1;
Staphylothermus marinus F1|Rep: 20S proteasome, A and B
subunits - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 213
Score = 77.4 bits (182), Expect = 3e-13
Identities = 51/174 (29%), Positives = 83/174 (47%)
Frame = +2
Query: 125 GAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLK 304
G V+ +K + V IA +KR +S N KV + + +G GL D Q + + L+
Sbjct: 18 GTVLGIKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALR 77
Query: 305 FRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 484
YEL+ R +R + + +LS +LY + P E V+ G D Q YV +D +G
Sbjct: 78 MEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGPQIYV--LDPVG 135
Query: 485 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
E + +V G+ G+ E + ++ DE + A+ A +RDA+SG
Sbjct: 136 SLIE-DKYVALGSGGPIALGIIEKEYREDIDVDEAEKLAVSAIREAIERDAVSG 188
>UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;
Thermoplasmatales|Rep: Proteasome subunit beta precursor
- Thermoplasma acidophilum
Length = 211
Score = 77.4 bits (182), Expect = 3e-13
Identities = 46/175 (26%), Positives = 92/175 (52%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G V + +D V +AT++R ++ + N K+FQ+ + + GL D Q + + +
Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYM 67
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
K + LY L+ M + + +LSN+L + ++ PY ++ ++ G+ D P+V ++D
Sbjct: 68 KAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI---DTAPHVFSIDAA 124
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G E + + +G+ S +YG+ E+ + + DE + + +A+ A RD+ SG
Sbjct: 125 GGSVE-DIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASG 178
>UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome
endopeptidase complex - Candidatus Nitrosopumilus
maritimus SCM1
Length = 198
Score = 75.8 bits (178), Expect = 9e-13
Identities = 45/175 (25%), Positives = 86/175 (49%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G V + V A++KR VS K F + P + GL D Q + ++
Sbjct: 7 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 66
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
+ +++ R + P T + M+SN++YERR+ P + ++ G+ ++P + +D +
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGV---VDKPIMYTLDPL 123
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G P+++ GT +E G+ + ++PN+ DE + +A+ A+ RD+ SG
Sbjct: 124 GSV-LPDEYAAVGTGAEMALGVLDPQFKPNMTKDEAIDLAKRAVRAASLRDSASG 177
>UniRef50_A2BN27 Cluster: Proteasome beta; n=3;
Desulfurococcales|Rep: Proteasome beta - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 212
Score = 75.8 bits (178), Expect = 9e-13
Identities = 48/178 (26%), Positives = 82/178 (46%)
Frame = +2
Query: 113 AYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVF 292
A G V + +D V +A D+R K+ ++ + + GL D Q +
Sbjct: 12 ALKGTTTVGIVFRDFVVLAADRRATAGYFVAHKRTKKIIKITDYMAMTTAGLVADAQMLA 71
Query: 293 QRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNM 472
+ L + YE+ R M + LS +L+ +F PY ++ ++ G YD QP + N+
Sbjct: 72 EWLANHTHYYEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGG---YDTQPRLYNI 128
Query: 473 DLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
D G E E +V +G+ S G+ E + PNL +E E +A+ ++ RD +G
Sbjct: 129 DWFGSVTE-EKYVATGSGSPTAIGVIEDQYSPNLSMEEAVELAKRAVASSIRRDTFTG 185
>UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor;
n=6; Endopterygota|Rep: Proteasome subunit beta type-1
precursor - Drosophila melanogaster (Fruit fly)
Length = 235
Score = 75.8 bits (178), Expect = 9e-13
Identities = 42/122 (34%), Positives = 63/122 (51%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
NGG++VA+ G D IA D R S K+F++ P +G G DT ++
Sbjct: 28 NGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGS 87
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
+K RM YE R M + + MLS +Y RRF PY++ ++AG+D + + V + D
Sbjct: 88 IKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGID-NEGKGVVYSYDP 146
Query: 479 IG 484
IG
Sbjct: 147 IG 148
>UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beat subunit, putative -
Theileria parva
Length = 218
Score = 74.9 bits (176), Expect = 1e-12
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFP-KVFQMGPTLYVGLPGLATDTQTVFQ 295
NGG V+A + IA D R Q + T F K+F++ +G G+ D +
Sbjct: 14 NGGTVIAATWNNYAVIAADTRLS-QRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQS 72
Query: 296 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 475
L+ ++ LY NR + +LS +LY RRF PY+ ++ G+D + VC D
Sbjct: 73 VLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDE-QGKGVVCGYD 131
Query: 476 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPN---LKP-----DELFETISQALVNAADR 631
+G N E + GT S + + + L N +KP ++L + A+V+A +R
Sbjct: 132 AVGNYNY-EKYTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDLVNLVKNAMVSAVER 190
Query: 632 DAISG 646
D +G
Sbjct: 191 DICTG 195
>UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1;
Encephalitozoon cuniculi|Rep: Proteasome subunit beta
type - Encephalitozoon cuniculi
Length = 203
Score = 74.1 bits (174), Expect = 3e-12
Identities = 48/175 (27%), Positives = 85/175 (48%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G ++A+K D V I D R + A S K+ Q+ ++V G + DTQ + L
Sbjct: 10 GTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQMISSYL 69
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
+ +++Y E+ + + + +A+ S ++YE P + +I YD++P V N+ L
Sbjct: 70 RMYLSMYSQLEDSIPQVQRAAALASKIIYE---NPSLLAGLIVA--GYDDKPRVFNISLG 124
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G E D+ + G+ S +YG C+ W + +E + A+ A +RD SG
Sbjct: 125 GSLTE-RDWAIGGSGSAFIYGYCDVNWRSGMSLEEGIRFVRNAVSCAINRDNASG 178
>UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 254
Score = 71.3 bits (167), Expect = 2e-11
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
NGG ++A+ G D IA D R +S N KVF + + G+ D Q + +
Sbjct: 54 NGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLLKH 113
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
+K Y LK + + + F +LS ++Y RR P++ ++AG+D + + V + D+
Sbjct: 114 MKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDS-EGRGAVYSYDV 172
Query: 479 IGCPNEPEDFVVSGTCSEQLYGMC-EALWEPN---LKPDELFETISQALVNAADRDAISG 646
IG + +GT + + + EA+ N + + FE I A + A+RD +G
Sbjct: 173 IGSTLRTR-YGSAGTGNAMICPILDEAILSKNEAEITREFAFELIQSAFRSCAERDIYTG 231
>UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 193
Score = 71.3 bits (167), Expect = 2e-11
Identities = 43/175 (24%), Positives = 84/175 (48%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G V + V +A++KR VS N K FQ+ P + GL D Q + ++
Sbjct: 3 GATAVGITYAGGVILASEKRIAYGNFLVSKNTRKTFQITPYVGAACAGLVADMQILSLQI 62
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
+ ++ R + P + + M+SN++YERRF P + ++ G+ +P + +D +
Sbjct: 63 SALAKIRKMDLKRDIPPNSVAKMMSNMMYERRFFPLLTQVIVGGV---VGEPAIYTLDSL 119
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G P+++ GT +E G+ + ++ + + + + + +AA RD+ SG
Sbjct: 120 GSV-LPDEYAAVGTGAEMALGVLDPQFKSGMSEKDAVDLAVRGIRSAALRDSFSG 173
>UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 226
Score = 69.7 bits (163), Expect = 6e-11
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 3/179 (1%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
N G V +KG+D V IA+D R ++ N K++ + G+ D + + +
Sbjct: 27 NCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKELTDQ 86
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
+K + Y+ + + M ++ + +LSN LY RF PY+ ++AG++ + N D
Sbjct: 87 IKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINS-KGKAVTYNYDA 145
Query: 479 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKP---DELFETISQALVNAADRDAISG 646
+G E + SG+ E Y + ++L + +P E + +A +RD +G
Sbjct: 146 VG-SFEERKYSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACERDIHTG 203
>UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7;
Halobacteriaceae|Rep: Proteasome, subunit alpha -
Halobacterium salinarium (Halobacterium halobium)
Length = 255
Score = 69.7 bits (163), Expect = 6e-11
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVST-NFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
G +V + QD V +A+D R + + +S N KV ++ P + + G Q+ +
Sbjct: 60 GTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIRS 119
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYF-IEPVIAGLDPYDNQPYVCNMD 475
L+ NLYE + M S M SNLL R GP+F + P++ G+D D+ +V ++D
Sbjct: 120 LRAEANLYEARRGEYMSIDALSTMASNLL---RGGPFFRVVPILGGVD--DDGGHVFSLD 174
Query: 476 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G + + + G+ G+ E + +L + + + A+ +A++RD SG
Sbjct: 175 PAG-SSMSDTYTAQGSGMPYALGVLEQEYSEDLTMADAEQVAAHAVKSASERDTASG 230
>UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2;
Dictyostelium discoideum|Rep: Proteasome subunit beta
type - Dictyostelium discoideum AX4
Length = 236
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTN-FPKVFQMGPTLYVGLPGLATDTQTVFQ 295
NGG V+A+ G+D IA D R + T + K+FQ+ + G+ DT + +
Sbjct: 29 NGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGMQADTIALQK 88
Query: 296 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 475
RLK + +E + + M + LSN LY +RF PY+ ++AG+D + ++ D
Sbjct: 89 RLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDE-QGEGWIWTYD 147
Query: 476 LIG 484
+G
Sbjct: 148 AVG 150
>UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3;
Fungi/Metazoa group|Rep: Proteasome subunit beta type -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 272
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFP-KVFQMGPTLYVGLPGLATDTQTVFQ 295
NGG+++A+ G+D IA D R + ++ T + KV+Q+ + + G A D +
Sbjct: 30 NGGSILAIAGKDFSIIAGDTRQS-EGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVK 88
Query: 296 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 475
R+K R+ YE N+ M K+ + M+ +LY +RF PY++ ++ G++ D V + D
Sbjct: 89 RVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEE-DGSGAVYSFD 147
Query: 476 LIG 484
+G
Sbjct: 148 PVG 150
>UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2;
Desulfurococcales|Rep: Proteasome beta subunit -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 204
Score = 67.7 bits (158), Expect = 2e-10
Identities = 43/175 (24%), Positives = 84/175 (48%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G V ++G V +A +KR +S KV+++ L + L GL D Q + + L
Sbjct: 8 GATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFADLQAISKIL 67
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
+ + Y + R + + + +L+ +LY ++ P+ E ++ GL+ D + MD +
Sbjct: 68 RAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEA-DGTAKLYVMDPL 126
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G E +D+ G+ + G+ E + ++ D+ + A+ A +RDA+SG
Sbjct: 127 GSLIE-DDYAAIGSGAPIAIGILENGYSKDMSVDDAKKLAIAAVRAAIERDAMSG 180
>UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7;
Viridiplantae|Rep: Proteasome subunit beta type-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 67.7 bits (158), Expect = 2e-10
Identities = 39/129 (30%), Positives = 62/129 (48%)
Frame = +2
Query: 98 NMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 277
N S NGG VA+ G D IA D R +S ++ K+ ++ + G D
Sbjct: 7 NWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQAD 66
Query: 278 TQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQP 457
+ + + LK R +Y+ + N+ M + +LSN LY +RF PY+ V+ GLD + +
Sbjct: 67 VKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDE-EGKG 125
Query: 458 YVCNMDLIG 484
V D +G
Sbjct: 126 CVFTYDAVG 134
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/122 (28%), Positives = 64/122 (52%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
NGG V+ + G+D V +A D R + + + PK+ ++ +G G+ +D +T+
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
LK ++ L+ L+ + +L +LY RRF PY+ ++AG+ D++ + N D
Sbjct: 97 LKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVS-NDSKGVLYNYDA 155
Query: 479 IG 484
IG
Sbjct: 156 IG 157
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 67.3 bits (157), Expect = 3e-10
Identities = 43/171 (25%), Positives = 86/171 (50%)
Frame = +2
Query: 134 VAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRM 313
V +K D + +A+++R +S KV+++ L G G+ D QT+ + + +
Sbjct: 9 VGLKVNDGIVLASERRLSYGGYVLSKQAKKVYKINKFLMAGA-GIYGDLQTLTRIMNVEI 67
Query: 314 NLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPN 493
YE+ + + + +LS +LY+ + P+ E + G+D Q YV +D IG
Sbjct: 68 KYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGPQLYV--LDPIGSLI 125
Query: 494 EPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
E +++ G+ + G+ E+ ++PN+ D + I++A+ + +RD SG
Sbjct: 126 E-DNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITKAIKASIERDITSG 175
>UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;
Sulfolobaceae|Rep: Proteasome subunit beta precursor -
Sulfolobus solfataricus
Length = 208
Score = 66.5 bits (155), Expect = 5e-10
Identities = 44/175 (25%), Positives = 83/175 (47%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G V ++ D V +A D+R + KV + + + G D Q ++ L
Sbjct: 14 GTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 73
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
K + + + + K + L+N+L ++ PY ++ +I G YD+QP + N+D +
Sbjct: 74 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGG---YDDQPRLFNLDYL 130
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G E E++V +G+ S G+ E + P + DE + +A+ +A RD+ +G
Sbjct: 131 GDITE-ENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTG 184
>UniRef50_P23724 Cluster: Proteasome component C5; n=23;
Fungi/Metazoa group|Rep: Proteasome component C5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 241
Score = 66.5 bits (155), Expect = 5e-10
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPTLYVGLPGLATDTQTVFQ 295
NGG ++ + G+D +A D R I ++++ + PKVF G + + G A D + +
Sbjct: 27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVK 85
Query: 296 RLKFRMNLYELKEN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNM 472
R K + Y N + + + + + +LLY +RF PY++ +IAGLD D + V +
Sbjct: 86 RFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDE-DGKGAVYSF 144
Query: 473 DLIG 484
D +G
Sbjct: 145 DPVG 148
>UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3, partial;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Proteasome (prosome, macropain) subunit, beta type, 3,
partial - Ornithorhynchus anatinus
Length = 104
Score = 66.1 bits (154), Expect = 7e-10
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +2
Query: 395 RFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVV 514
RFGPY+ EPVIAGLDP +P++C++DLIGCP +DFVV
Sbjct: 65 RFGPYYTEPVIAGLDPTTFEPFICSLDLIGCPMVTDDFVV 104
>UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Proteasome,
beta subunit - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 204
Score = 64.9 bits (151), Expect = 2e-09
Identities = 40/175 (22%), Positives = 89/175 (50%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G V + +D V A+++R + K+F++ + + G D Q + + +
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
+ ++LY+++ N + K +++ +N+L R GP +++ ++ G+D ++P + ++D
Sbjct: 68 EAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMD--GDKPSLYSLDPA 122
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G E + ++ +G+ S YG+ E + + DE E +A+ A++RD SG
Sbjct: 123 GGMIE-DTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSG 176
>UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 247
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/123 (26%), Positives = 62/123 (50%)
Frame = +2
Query: 116 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 295
+N G V A+ D V +A DKR VS + K+ ++ +++ G+ D + +
Sbjct: 41 FNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSGMYADFAALSK 100
Query: 296 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 475
+L R+++Y+ + + +++LS LY +RF PY+ ++AG D + V N D
Sbjct: 101 QLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDD-KGEGLVINYD 159
Query: 476 LIG 484
+G
Sbjct: 160 AVG 162
>UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 246
Score = 64.5 bits (150), Expect = 2e-09
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 8/184 (4%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
NGG+ VA+ G D V IA D R + S + K Q+ + G+ D + +
Sbjct: 43 NGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGMLADINALRKT 102
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
L ++ LYE + N+ + +LS +LY +RF PY+ +++GLD + V D
Sbjct: 103 LLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDE-QGKGVVYGYDA 161
Query: 479 IGCPNEPEDFVVSGT--------CSEQLYGMCEALWEPNLKPDELFETISQALVNAADRD 634
+G ++ FV G+ Q+ G + +E ++ + + ++ +A++RD
Sbjct: 162 VGSFDQ-HKFVALGSGGSLITSILDNQISGNNQTSFE-SIDKVGIINIVKDSITSASERD 219
Query: 635 AISG 646
+G
Sbjct: 220 VHTG 223
>UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:
NEQ203 - Nanoarchaeum equitans
Length = 196
Score = 64.1 bits (149), Expect = 3e-09
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Frame = +2
Query: 131 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 310
++ +K +D V +A+DK+ + K+ + + + G D Q + + LK
Sbjct: 4 IIGIKARDGVVLASDKQASMGNIVEDKRAQKIIPITDYILLAGSGTVADLQHIAKILKTE 63
Query: 311 MNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY-VCNMDLIGC 487
+ L EL R M + +LS+LLY+ RF + +IAG P +++ + + ++D IG
Sbjct: 64 LKLRELYSRRTMNVIEAANLLSHLLYQNRFYLNPLGLLIAG--PINSKEFGIYSLDGIGA 121
Query: 488 PNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGW 649
+E +D+ G+ G EA + P++ + + +AL ++ RD SG+
Sbjct: 122 ISEIKDYFAEGSGGVIALGTLEAEYNPDITVRDAIKLAEKALKSSIARDVFSGY 175
>UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Oryza
sativa|Rep: Proteasome subunit beta type-1 - Oryza
sativa subsp. japonica (Rice)
Length = 221
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/122 (28%), Positives = 59/122 (48%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
NGG VA+ G D +A D R + ++ + K+ ++ + G D + + +
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKN 71
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
L R LY+ + N+ M + +LSN LY +RF PY+ V+ GLD + + V D
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS-EGKGCVFTYDA 130
Query: 479 IG 484
+G
Sbjct: 131 VG 132
>UniRef50_Q8VHB3 Cluster: Proteasomal subunit beta type III; n=4;
Eukaryota|Rep: Proteasomal subunit beta type III - Mus
musculus (Mouse)
Length = 48
Score = 62.9 bits (146), Expect = 6e-09
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +2
Query: 167 ATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV 289
A D+RFGIQAQ V+T+F K+F MG LY+GL GLATD QTV
Sbjct: 8 AADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 48
>UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 20S PROTEASOME ALPHA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 290
Score = 62.9 bits (146), Expect = 6e-09
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 9/181 (4%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
N G + +K D + +A D R S K+FQ+G L G G DT V+ +
Sbjct: 89 NSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGDFLLTG-TGFYADTHEVYVK 147
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
+ + + YE+ ++ + + + +LS +LY +RF PY+ V++G + +PYV + D
Sbjct: 148 MVYEIRQYEVDDS--INIHSAANLLSKILYSKRFFPYYSFCVLSGFE--KGKPYVYSYDP 203
Query: 479 IGCPNEPEDFVVSGTCSEQLYGMCEAL-----W----EPNLKPDELFETISQALVNAADR 631
IG V SG+ + + ++ W E L ++ + +A +AA+R
Sbjct: 204 IGSFGS-VTCVCSGSGRSMIQPLLDSFIDKKNWNNAEETQLSQEDCIRLVVKAFNSAAER 262
Query: 632 D 634
D
Sbjct: 263 D 263
>UniRef50_Q59PN5 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 124
Score = 62.9 bits (146), Expect = 6e-09
Identities = 45/113 (39%), Positives = 51/113 (45%)
Frame = -2
Query: 456 GWLS*GSRPAMTGSIK*GPKRRSYNKFDNIAENVLGRIILFSFNSYKFILNFSL*NTVWV 277
G LS PA G GP SYN NV G I+ S N YK +LN +
Sbjct: 3 GLLSLLLNPATMGLTNQGPNLLSYNDELTKFANVDGSILRSSRNLYKLVLNLNNSFKEIT 62
Query: 276 SVARPGRPTYNVGPIWNTFGKLVDTV*ACIPNRLSVAMATQSWPFMATTAPPL 118
SVA P P + P F KL+ T C PN S +A Q P MAT APPL
Sbjct: 63 SVANPVNPKKVLSPTSKIFSKLLLTPSDCCPNLKSSPIAIQPLPIMATAAPPL 115
>UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;
Thermococcaceae|Rep: Proteasome subunit beta precursor -
Pyrococcus abyssi
Length = 207
Score = 62.9 bits (146), Expect = 6e-09
Identities = 42/177 (23%), Positives = 83/177 (46%)
Frame = +2
Query: 116 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 295
+ G V + D V +A D+R + + N K+ ++ L + G D + +
Sbjct: 8 FKGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVR 67
Query: 296 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 475
L+ LY + + M K + +L+N+L R PY ++ G +D +P + ++D
Sbjct: 68 LLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGG---FDEKPRLYSVD 124
Query: 476 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
++G E + +V +G+ E Y + ++ + +LK E + +A+ +A RD SG
Sbjct: 125 MMGGITE-DKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSG 180
>UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 238
Score = 62.5 bits (145), Expect = 9e-09
Identities = 32/113 (28%), Positives = 58/113 (51%)
Frame = +2
Query: 146 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 325
G D +A D R S PKVF +G + V G + D + + +K + LY
Sbjct: 42 GDDFALLAGDTRNTTGYSINSRYQPKVFDVGDNILVTANGFSADGDALIENIKQHVELYH 101
Query: 326 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 484
+ N+ ++ ++ + + ++LY +RF PY++ +IAGLD + + V + D +G
Sbjct: 102 YQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLDE-EGKGAVYSYDPVG 153
>UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 215
Score = 61.7 bits (143), Expect = 1e-08
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 5/173 (2%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGP----TLYVGLPGLATDTQ 283
NGGA + + G D +A D R ++T + PKVF + ++ + + G A D +
Sbjct: 13 NGGATLGVSGPDFAILAGDTR-STAGYNINTRYEPKVFTIQDARDRSIVISVIGFAADGR 71
Query: 284 TVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYV 463
+ +RL + +Y+ + + + + + +S +LYE+RF PY ++ ++AG+D D Q +
Sbjct: 72 ALKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDA-DGQGAI 130
Query: 464 CNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNA 622
D GC E +G S + ++ P L+P L +T Q + +A
Sbjct: 131 YYYDPAGC-IEKRSHCAAGEASSLMLPFLDS-QAPRLQPLSL-QTAQQLVRDA 180
>UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type-1 -
Trypanosoma brucei brucei
Length = 258
Score = 61.7 bits (143), Expect = 1e-08
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRF-GIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 295
NGG + A+ G + V + D R G ++ K+F++ +++ G+ D + Q
Sbjct: 51 NGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQ 110
Query: 296 RLKFRMNLYELKEN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVC-N 469
LK+R+ Y+ ++ K + + S +LY+RRF PY+ +I G+D + VC +
Sbjct: 111 MLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGID--EKGAGVCYS 168
Query: 470 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALW---------EPNLKPDELFETISQALVNA 622
D +G EP + G+ S + + + L +L +E + A A
Sbjct: 169 YDPVG-STEPFRYGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFTGA 227
Query: 623 ADRDAISG 646
A+RD +G
Sbjct: 228 AERDIFTG 235
>UniRef50_A6R393 Cluster: Proteasome component C5; n=5;
Ascomycota|Rep: Proteasome component C5 - Ajellomyces
capsulatus NAm1
Length = 266
Score = 61.3 bits (142), Expect = 2e-08
Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPT--------LYVGLPGLA 271
NGG+ + + G+D +A D R + ++T + PK+F++G L + + G A
Sbjct: 40 NGGSTLGIAGKDYAILAGDTR-SVSGYNINTRYAPKLFKIGEGDECGEGAHLVLSVVGFA 98
Query: 272 TDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDN 451
D + + +RL + +Y+ K + M + L+ +LY +RF PY++ ++AG+D D
Sbjct: 99 ADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDE-DG 157
Query: 452 QPYVCNMDLIG 484
+ + + D +G
Sbjct: 158 KGALYSYDPVG 168
>UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4;
Thermococcaceae|Rep: PsmB proteasome, subunit beta -
Pyrococcus abyssi
Length = 197
Score = 61.3 bits (142), Expect = 2e-08
Identities = 40/175 (22%), Positives = 81/175 (46%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G V ++ +D V +A D + + + N K+ + + + G D Q + + L
Sbjct: 6 GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARIL 65
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
+ Y+ R M + + +LSN+L E ++ PY ++ +I G Y ++P + N+D +
Sbjct: 66 EAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGG---YVDEPTIANLDPL 122
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G +D+ +G+ + + E + NL ++ E +A+ A RD +G
Sbjct: 123 G-GLIFDDYTATGSGTPFAIAILEEGYRKNLGIEKAKELAIKAVKAAGARDVYTG 176
>UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precursor;
n=93; Metazoa|Rep: Proteasome subunit beta type-8
precursor - Homo sapiens (Human)
Length = 276
Score = 58.8 bits (136), Expect = 1e-07
Identities = 48/183 (26%), Positives = 80/183 (43%)
Frame = +2
Query: 98 NMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 277
N+ I +G +A K Q V A D R + + KV ++ P L + G A D
Sbjct: 64 NVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAAD 123
Query: 278 TQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQP 457
Q + L LY L+ + S +LSN++ + R + +I G D P
Sbjct: 124 CQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDK--KGP 181
Query: 458 YVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDA 637
+ +D G F +G+ + YG+ ++ + PNL P+E ++ +A+ A RD+
Sbjct: 182 GLYYVDEHGTRLSGNMFS-TGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDS 240
Query: 638 ISG 646
SG
Sbjct: 241 YSG 243
>UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 224
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
+GG + + G D V I D R + S + ++F+M + G D R
Sbjct: 19 HGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATGFDGDIDAFITR 78
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 439
++ + YE + M ++ + +SN LY +RF PY+I ++ G++
Sbjct: 79 MRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGIN 125
>UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A
precursor; n=13; Viridiplantae|Rep: Proteasome subunit
beta type-5-A precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 274
Score = 55.2 bits (127), Expect = 1e-06
Identities = 42/163 (25%), Positives = 77/163 (47%)
Frame = +2
Query: 158 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 337
V +A D R + S + K+ ++ P + + G A D Q + L + L+EL
Sbjct: 69 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 128
Query: 338 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 517
R + S +L+N+LY R + +IAG D + P + +D G + + F V
Sbjct: 129 RRISVSGASKLLANMLYSYRGMGLSVGTMIAGWD--ETGPGLYYVDNEGGRLKGDRFSV- 185
Query: 518 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G+ S YG+ ++ ++ ++ +E E +++ +A RD SG
Sbjct: 186 GSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASG 228
>UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4;
n=3; Sophophora|Rep: Probable proteasome subunit beta
type-4 - Drosophila melanogaster (Fruit fly)
Length = 268
Score = 55.2 bits (127), Expect = 1e-06
Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +V+ ++ V +A D + N +VF++ + +G G D Q++ + +
Sbjct: 57 GTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNI 116
Query: 302 KFRMNLYEL-KENRMMRPKTFSAMLSNLLYER--RFGPYFIEPVIAGLDPYDNQPYVCNM 472
+M + +N M+PK+ ++ ++ +LY R R P +I+ V+ G+D + PY+ N+
Sbjct: 117 DQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVD-NEGTPYLANV 175
Query: 473 DLIGCPNEPEDFVVS 517
DL G ED+VV+
Sbjct: 176 DLRG--RSYEDYVVA 188
>UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 54.8 bits (126), Expect = 2e-06
Identities = 37/122 (30%), Positives = 57/122 (46%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
N G V+A+ V +A D R +S + K+ Q+ + G D + +
Sbjct: 35 NSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLATAGQYADFIALRKF 94
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
L+ R+ LYE + +T + +LS LY RRF PY+ ++AGLD +N V D
Sbjct: 95 LQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDE-NNHGVVYGYDA 153
Query: 479 IG 484
IG
Sbjct: 154 IG 155
>UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 239
Score = 53.2 bits (122), Expect = 5e-06
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 1/176 (0%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G ++AM+ V + TD R + S K+ + + V G A DTQ +
Sbjct: 23 GTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADIA 82
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD-PYDNQPYVCNMDL 478
K+ +++Y + EN+ + S + LY R ++AG D Q Y
Sbjct: 83 KYHIDVYTMTENKPVTIYRSSQIFRQFLYNYR-EQLSASVLVAGWDEELGGQVYAIP--- 138
Query: 479 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
IG + SG+ S + G ++ W PNL +E + QA+ A RD SG
Sbjct: 139 IGGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEECKAIVKQAVGLATFRDGSSG 194
>UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precursor;
n=79; Eumetazoa|Rep: Proteasome subunit beta type-9
precursor - Homo sapiens (Human)
Length = 219
Score = 52.8 bits (121), Expect = 7e-06
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 1/178 (0%)
Frame = +2
Query: 116 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 295
+ G ++A++ V + +D R V+ F K+ + +Y L G A D Q V
Sbjct: 18 HTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVAD 77
Query: 296 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDN-QPYVCNM 472
+++ L+ ++ + ++ N+ Y+ R ++AG D + Q Y
Sbjct: 78 MAAYQLELHGIELEEPPLVLAAANVVRNISYKYR-EDLSAHLMVAGWDQREGGQVY---- 132
Query: 473 DLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
+G + F + G+ S +YG +A ++P + P+E + A+ A RD SG
Sbjct: 133 GTLGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSG 190
>UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precursor;
n=14; Magnoliophyta|Rep: Proteasome subunit beta type-6
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 233
Score = 52.4 bits (120), Expect = 9e-06
Identities = 37/175 (21%), Positives = 75/175 (42%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G ++ + V + D R + K+ Q+ +YV G A D+Q V +
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 71
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
++ ++ + ++ + K + ++ L Y + ++ G D Y+ + + L
Sbjct: 72 RYFLHQHTIQHGQPATVKVSANLIRMLAYNNK-NMLQTGLIVGGWDKYEGGK-IYGIPLG 129
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G E + F + G+ S LYG + W+ N+ +E + + +A+ A RD SG
Sbjct: 130 GTVVE-QPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASG 183
>UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precursor;
n=48; Eukaryota|Rep: Proteasome subunit beta type-5
precursor - Homo sapiens (Human)
Length = 208
Score = 52.0 bits (119), Expect = 1e-05
Identities = 44/176 (25%), Positives = 78/176 (44%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
+G +A K + V +A D R A S KV ++ P L + G A D +
Sbjct: 3 HGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERL 62
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
L + +YEL+ + S +L+N++Y+ + + +I G D P + +D
Sbjct: 63 LARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDK--RGPGLYYVDS 120
Query: 479 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G F V G+ S YG+ + + +L+ ++ ++ +A+ A RDA SG
Sbjct: 121 EGNRISGATFSV-GSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSG 175
>UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4;
n=17; Ascomycota|Rep: Probable proteasome subunit beta
type-4 - Schizosaccharomyces pombe (Fission yeast)
Length = 262
Score = 52.0 bits (119), Expect = 1e-05
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +V+A+K D V IA D + + ++ ++G VG G +D Q + QRL
Sbjct: 43 GSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQI-QRL 101
Query: 302 KFRMNLYE--LKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCN 469
++ + E + ++P LS +LY RR PY+ + ++AG+D + +PYV
Sbjct: 102 LEKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAF 161
Query: 470 MDLIG 484
DL G
Sbjct: 162 ADLRG 166
>UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2;
Oligohymenophorea|Rep: Proteasome subunit beta type -
Tetrahymena thermophila SB210
Length = 227
Score = 51.2 bits (117), Expect = 2e-05
Identities = 37/175 (21%), Positives = 76/175 (43%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +++A+ V + D R + KV + +Y G A DTQT+ +
Sbjct: 25 GTSIMALVYDGGVLVGADSRTTSGSYIADRAQDKVDYLHERIYCLRSGSAADTQTLCSYV 84
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
++ ++++ ++ R KT + + SNL+Y+ + ++AG+D +
Sbjct: 85 RYYLDVHSMELQRRPTVKTAAKLFSNLIYQYQ-DNLSAAVIVAGIDDNEGPSIYACQPSG 143
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
C + + G+ S ++ +A + PN+ + + + AL +A RD SG
Sbjct: 144 SCIK--QQVAIGGSGSGFIFSYVDANFRPNMDLESAKKLVKTALAHAMSRDGSSG 196
>UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precursor;
n=43; Bilateria|Rep: Proteasome subunit beta type-6
precursor - Homo sapiens (Human)
Length = 239
Score = 50.4 bits (115), Expect = 4e-05
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 1/176 (0%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G ++A++ V + D R + + K+ + ++ G A DTQ V +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAV 93
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDN-QPYVCNMDL 478
+++ + ++ N T +++ + Y R +IAG DP + Q Y M
Sbjct: 94 TYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPM-- 150
Query: 479 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G + F + G+ S +YG +A + + +E + + AL A +RD SG
Sbjct: 151 -GGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSG 205
>UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=3; Coelomata|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 268
Score = 49.6 bits (113), Expect = 6e-05
Identities = 45/176 (25%), Positives = 77/176 (43%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
+G +A K Q V +A D R + S KV ++ P L + G A D +
Sbjct: 67 HGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCSFWERL 126
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
L + +YEL+ + S +L+N++Y+ + + ++ G D P + +D
Sbjct: 127 LARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDK--RGPGLYYVDS 184
Query: 479 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G + F V G+ S YG+ ++ +L +E E +A+ A RDA SG
Sbjct: 185 EGNRVCGDLFAV-GSGSMYAYGVMDSGLRHDLSVEEACELGRRAIYQATYRDAYSG 239
>UniRef50_A2DD57 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 256
Score = 49.6 bits (113), Expect = 6e-05
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Frame = +2
Query: 95 TNMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLAT 274
T +S + YNGG VVA+ + AT +F I +QTV K+ + P + + G A
Sbjct: 55 TTLSFI-YNGGIVVAVDSR-----ATGGQF-IFSQTVM----KILPLAPNMIGTMAGGAA 103
Query: 275 DTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQ 454
D Q + L + L++ + + + S +L N LY + I +I G YDN
Sbjct: 104 DCQYWLRNLSRLIQLHKFRYQQPLTVAAASKILVNELYRYKGYNLSIGSMICG---YDNT 160
Query: 455 -PYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADR 631
P++ +D G + F V G+ S YG+ + + ++ +E E +A+ +A R
Sbjct: 161 GPHIFYIDNHGSRIAGKRFSV-GSGSTHAYGVLDTCYREDMTKEEACELGRRAIYHATYR 219
Query: 632 DAISG 646
D+ SG
Sbjct: 220 DSGSG 224
>UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 239
Score = 48.8 bits (111), Expect = 1e-04
Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 4/199 (2%)
Frame = +2
Query: 29 IQYFELITLQ*-FQVKKC-LSFYITNMSILAY--NGGAVVAMKGQDCVAIATDKRFGIQA 196
I+Y++ + + F +K L+F N + Y NGG V+A+ G +A+D R +
Sbjct: 2 IRYWDFVIKKLNFNIKTYNLNFKSLNRNFDPYQNNGGLVLAITGNKFCVMASDTRISMGY 61
Query: 197 QTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLS 376
S ++ ++ +G G+ +D + Q+L+ + + N + + S
Sbjct: 62 SIPSRLNLRILKISNLCLLGSSGMISDINILHQKLRNEIFRLKYLNNTELNLNGIVYLTS 121
Query: 377 NLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEA 556
+LLY RRF P++ ++ G++ D IG + V G C + +
Sbjct: 122 SLLYSRRFFPFYTFNILTGINELGKASNY-TYDAIGSFDCNHASTV-GNCQSSAQCIMDY 179
Query: 557 LWEPNLKPDELFETISQAL 613
+ E + D ++TI Q +
Sbjct: 180 IEERKIPNDRNYKTILQVV 198
>UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1;
Ustilago maydis|Rep: Proteasome subunit beta type -
Ustilago maydis (Smut fungus)
Length = 266
Score = 48.4 bits (110), Expect = 1e-04
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +V+ +K +D + +ATD + + ++ Q G +G G +D Q V L
Sbjct: 48 GTSVLGIKYKDGIMLATDTLASYGSLARFMDITRISQFGQNTLIGASGDMSDWQYVQHML 107
Query: 302 KFRMNLYELK-ENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCNM 472
+ ++ + + P A L+ ++Y+RR P + V+ G+DP D P++ +
Sbjct: 108 NKLITSEDVAADGHNLTPTQIYAYLARVMYQRRSKINPLWNSFVLGGVDPKDGTPFLGYV 167
Query: 473 DLIG 484
DL+G
Sbjct: 168 DLLG 171
>UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 279
Score = 48.0 bits (109), Expect = 2e-04
Identities = 43/175 (24%), Positives = 71/175 (40%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +V + DCV + D R + K+ ++ ++ G A D V +
Sbjct: 41 GTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAGAGTAADLDHVTSLI 100
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
+ + L +L+ NR R +MLS+ LY+ + G ++AG D N +V +
Sbjct: 101 EGNLELQKLQMNRKPRVAHAVSMLSDHLYKYQ-GYIGAHLIVAGSDSTGN--FVFQVSAN 157
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
GC + F G+ S + EA + L E E +S A+ D SG
Sbjct: 158 GCIMQ-LPFTSMGSGSLCARSILEARYRDGLTESECVELVSDAIRAGIYNDLYSG 211
>UniRef50_Q5CU00 Cluster: Pre3p/proteasome regulatory subunit beta
type 6, NTN hydrolase fold; n=3; Cryptosporidium|Rep:
Pre3p/proteasome regulatory subunit beta type 6, NTN
hydrolase fold - Cryptosporidium parvum Iowa II
Length = 248
Score = 48.0 bits (109), Expect = 2e-04
Identities = 40/175 (22%), Positives = 82/175 (46%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +VA+K +D + +A D R K+ Q+ +++ G A DTQ + + +
Sbjct: 51 GTTIVALKYKDGLVLAADGRTSTGPIIAFRAARKITQITDKVFMCRSGSAADTQIISRYV 110
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
+ + +EL+ + K+ +++ + Y+ + + +IAG+DP + + V + L
Sbjct: 111 RRIVQDHELETGEDTKVKSVASVARLISYQNK-EHLLADMIIAGMDP-NGEFKVFRIPLG 168
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G E + +SG+ S +Y M ++ + + DE + +A RD+ SG
Sbjct: 169 GTLIEGS-YAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAMFRDSSSG 222
>UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type-1 -
Caenorhabditis elegans
Length = 258
Score = 48.0 bits (109), Expect = 2e-04
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQ-MGPTLYVGLPGLATDTQTVFQR 298
GG+ A+ G++ +A+D R + T + Q + + + G D + +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
L+ R++ Y M + +LS LY RRF PY+ ++AG+D + + V + D
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEH-GKGAVFSYDP 169
Query: 479 IGC 487
IGC
Sbjct: 170 IGC 172
>UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium yoelii yoelii
Length = 287
Score = 47.6 bits (108), Expect = 3e-04
Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Frame = +2
Query: 116 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 295
+ G +A K ++ + +A D R + + S N K+ ++ + + G A D +
Sbjct: 57 HKGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINKYILGTMAGGAADCFYWEK 116
Query: 296 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 475
L + +YEL+ N + + S +LSN+LY+ + +++G YD+ + NM
Sbjct: 117 YLGQIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSG---YDHTGF--NMF 171
Query: 476 LIGCPNEPED--FVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
I + + G+ S Y + ++ ++ NL ++ E A+ +A RD SG
Sbjct: 172 YIDDEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLSVEQAVELGRNAIYHATFRDGGSG 230
>UniRef50_Q23FB2 Cluster: Proteasome, putative; n=5;
Oligohymenophorea|Rep: Proteasome, putative -
Tetrahymena thermophila SB210
Length = 297
Score = 47.6 bits (108), Expect = 3e-04
Identities = 47/175 (26%), Positives = 71/175 (40%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +A K Q V +A D R + S K+ ++ L + G A D Q Q L
Sbjct: 74 GTTTLAFKFQGGVIVAVDSRASQGSFDASETVRKIIEINDQLLGTMAGGAADCQFWEQYL 133
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
Y+L+ + S +L N+LY R + ++ G D Q Y + D
Sbjct: 134 AIECRKYQLQNREKVSVAAASRILINILYSYRNHGLSMGCMLTGWDHEGAQLYYLDND-- 191
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G + F G+ S YG+ + + NL E E +A+ +A RDA SG
Sbjct: 192 GQRIKGNIF-SCGSGSTYAYGVLDNEYHYNLSVKEAAELGRKAIYHATHRDAGSG 245
>UniRef50_Q00826 Cluster: Probable proteasome subunit beta type-2;
n=2; Filobasidiella neoformans|Rep: Probable proteasome
subunit beta type-2 - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 224
Score = 46.8 bits (106), Expect = 5e-04
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Frame = +2
Query: 146 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 325
G+D V +A+D G + ++ K+ +GP L + G DT + ++ M LY
Sbjct: 9 GKDYVILASDMGAGRSIVRMKSDENKLKTLGPHLAMAFSGEPGDTNNFAEYIERNMRLYN 68
Query: 326 LKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 484
++ + + P SA + L E R PY + ++ G D ++P++ +D +G
Sbjct: 69 IRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLLLGGFDTTTSKPHLYWIDYLG 123
>UniRef50_P22141 Cluster: Proteasome component C11; n=36;
Ascomycota|Rep: Proteasome component C11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 198
Score = 46.4 bits (105), Expect = 6e-04
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +2
Query: 131 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 310
++ ++ QD V +A+ K + + K Q+ P + G A DT + ++
Sbjct: 4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQAN 63
Query: 311 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 484
+ LY ++E+ + P+ S+ + L + R PY + +I G D N+P + +D +G
Sbjct: 64 IQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLG 123
>UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n=1;
Arthrobacter aurescens TC1|Rep: Putative 20S proteasome
beta-subunit - Arthrobacter aurescens (strain TC1)
Length = 324
Score = 46.0 bits (104), Expect = 8e-04
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 4/176 (2%)
Frame = +2
Query: 131 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 310
+VA+ V +A D+R + S + KVF +G+ G A + + +
Sbjct: 104 IVALTYAGGVLMAGDRRATMGNIIASRHIEKVFPADEYSVLGIAGTAGLAIDITRLFQVE 163
Query: 311 MNLYELKENRMM----RPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
+ YE E ++ + AM+ L G I P+ AG D + + D+
Sbjct: 164 LEHYEKIEGTLLSLVGKANRLGAMIRGNLPMAMQGMAVI-PLFAGFDQVAGVGRLFSYDV 222
Query: 479 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G E + G+ S G + LW+PNL ++ +AL +AAD D+ +G
Sbjct: 223 TGGRYEELEHHSVGSGSVFARGALKKLWKPNLSEEDAISVAVEALYDAADDDSATG 278
>UniRef50_Q9XUV0 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 284
Score = 46.0 bits (104), Expect = 8e-04
Identities = 40/163 (24%), Positives = 71/163 (43%)
Frame = +2
Query: 158 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 337
+ +A D R S + K+ +G + + G A D Q + + LYEL+E
Sbjct: 83 IIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREK 142
Query: 338 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 517
+ S +N LY R + ++AG D P + +D G + + V
Sbjct: 143 TSITVSAASKYFANTLYGYRGQGLSVGSMVAGYD--KKGPQIFKVDSEGDRCQLKVCSV- 199
Query: 518 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G+ S YG+ + ++P + DE + +A+++A RD+ SG
Sbjct: 200 GSGSLNAYGILDNHYKPKMTDDEARKLGLRAIMHATYRDSGSG 242
>UniRef50_Q7QLL8 Cluster: Proteasome subunit beta type; n=4;
Endopterygota|Rep: Proteasome subunit beta type -
Anopheles gambiae str. PEST
Length = 271
Score = 45.6 bits (103), Expect = 0.001
Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +VV + +D V IA DK + + +V+++ +G+ G D Q + + +
Sbjct: 58 GTSVVGLMFKDGVIIAADKLISYGSLARFHDVDRVYRINDKTVLGIGGDFADFQYIKRHI 117
Query: 302 KFRMNLYE-LKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCNM 472
++ + L + M+P++F L+ ++Y RR F P +++ VI G+ D +P++ ++
Sbjct: 118 DQKVIDDQCLDDKNEMKPRSFYNWLTRVMYNRRSEFQPLYLDLVIGGMQ--DGEPFLGHV 175
Query: 473 DLIG 484
+L G
Sbjct: 176 NLRG 179
>UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 290
Score = 45.2 bits (102), Expect = 0.001
Identities = 43/166 (25%), Positives = 72/166 (43%)
Frame = +2
Query: 149 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL 328
Q V +A D R + S K+ Q+ L + G A D + L LYEL
Sbjct: 88 QGGVILAVDSRASQGSYIASQEVKKIIQINDFLLGTMAGGAADCSYWERVLSKLCRLYEL 147
Query: 329 KENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDF 508
+ + S M++N+ + R +IAG D + P++ +D G + F
Sbjct: 148 RNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFD--KDGPHLYYVDNEGSRVKDCKF 205
Query: 509 VVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
V G+ S YG+ ++ + +L +E + +A+V A +RD SG
Sbjct: 206 SV-GSGSLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIATNRDGGSG 250
>UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 206
Score = 44.8 bits (101), Expect = 0.002
Identities = 31/128 (24%), Positives = 61/128 (47%)
Frame = +2
Query: 263 GLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDP 442
G A DTQ + + +++ ++ + + R+ T + + N LYE + ++AG DP
Sbjct: 64 GAAADTQIITKHVRYYVDAHAQELGRLPAVATAANLFRNFLYEYK-DSMSASIIVAGWDP 122
Query: 443 YDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNA 622
Y P + + L G E + + + G+ S ++G C++ ++ L + A+ +A
Sbjct: 123 YKG-PQIFTLPLGGSVIE-QKWSIGGSGSTFIWGFCDSNYQSMLNQIMSRTFVLHAVAHA 180
Query: 623 ADRDAISG 646
RD SG
Sbjct: 181 MFRDGSSG 188
>UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_66910_67563 - Giardia lamblia
ATCC 50803
Length = 217
Score = 44.4 bits (100), Expect = 0.002
Identities = 39/177 (22%), Positives = 67/177 (37%), Gaps = 2/177 (1%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
GG VVA+ +D V +A D + + N+ ++ +G +G G D + L
Sbjct: 7 GGTVVAVAHKDGVLMAADTVLNYGSTRRTDNYERIIPVGTHTLIGFTGDEADFKDSLYTL 66
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCNMD 475
K + L+ Y R P + +I G +P ++ PY+ +D
Sbjct: 67 KSMHREARCHGTPPPSTREIHGFLATRNYSSRLEMDPIYNGYIIGGCEPGES-PYIGVVD 125
Query: 476 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
L G F +G + W+P + DE + ++L A DA +G
Sbjct: 126 LRG-TQFTASFFATGMGRHYALPVLREGWKPGISKDEAVALLLESLKTLAFNDAAAG 181
>UniRef50_Q10329 Cluster: Probable proteasome subunit alpha type-7;
n=3; Ascomycota|Rep: Probable proteasome subunit alpha
type-7 - Schizosaccharomyces pombe (Fission yeast)
Length = 259
Score = 44.4 bits (100), Expect = 0.002
Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 4/169 (2%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +A++G +C+ I +++ + Q VS NF K+ + + + GL D + + +
Sbjct: 30 GTTAIALRGNECIVIGVERKNVPKLQNVS-NFQKIAMVDNHVCLAFAGLNADARILIDKA 88
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLL--YERRFG--PYFIEPVIAGLDPYDNQPYVCN 469
+ ++L + + + ++ + Y + G P+ + +IAG D DN P V
Sbjct: 89 RVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQ 148
Query: 470 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALV 616
+ G N + + G S+ E W+ L DE +L+
Sbjct: 149 TEPAGIYNAWKATAI-GRASKAAREYLEKNWKEGLSRDETIHLAVSSLL 196
>UniRef50_A1RWY6 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 200
Score = 44.0 bits (99), Expect = 0.003
Identities = 39/176 (22%), Positives = 76/176 (43%), Gaps = 1/176 (0%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G V + G+D V +A D+R + K+ ++ + + G D Q + RL
Sbjct: 12 GTTTVGLVGKDFVVLAADRRATAGYFIANKQTWKIVEIDSHIAATIAGTVGDAQQLVDRL 71
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYF-IEPVIAGLDPYDNQPYVCNMDL 478
+ Y+ M K+ + + S +L++ R P ++ +I G+D + P + ++D
Sbjct: 72 RVEARYYKTITGDSMPVKSVATLASLILFQYR--PILSVQMLIGGVD--SDGPSLFSVDW 127
Query: 479 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
+G E + +G+ S + E + +L +E +A+ A RD SG
Sbjct: 128 LGTVTR-EKYTATGSGSPYAVSLLEHEYREDLSLEEAVNLAVKAVNIALARDPGSG 182
>UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7;
n=1; Candida albicans|Rep: Putative uncharacterized
protein PRE7 - Candida albicans (Yeast)
Length = 127
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPTLYVGLPGLATDTQTVFQ 295
NGG V+ + G+D +A D R ++ ++ + + K+ +G + + G A D +
Sbjct: 31 NGGTVLGIAGEDFAVLAGDTR-QVEGYSIQSRYESKIHDVGDDILMTANGFAADGVALID 89
Query: 296 RLKFRMNLYELKEN-RMMRPKTFSAMLSNLLYERRFGP 406
R K + Y+ N + + K+ + + LLY +RF P
Sbjct: 90 RFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRFFP 127
>UniRef50_Q9ZRY9 Cluster: 20S proteasome beta subunit; n=8;
Magnoliophyta|Rep: 20S proteasome beta subunit - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 238
Score = 42.7 bits (96), Expect = 0.007
Identities = 35/127 (27%), Positives = 61/127 (48%)
Frame = +2
Query: 266 LATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPY 445
+A D Q + L + L+EL R + S +L+N+LY R + +IAG D
Sbjct: 69 VAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-- 126
Query: 446 DNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAA 625
+ P + +D G + F V G+ S YG+ ++ ++ ++ +E E +A+ +A
Sbjct: 127 ETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKYDMSIEEASELARRAIYHAT 185
Query: 626 DRDAISG 646
RD SG
Sbjct: 186 FRDGASG 192
>UniRef50_Q7QT27 Cluster: Proteasome subunit beta type; n=2; Giardia
intestinalis|Rep: Proteasome subunit beta type - Giardia
lamblia ATCC 50803
Length = 294
Score = 42.7 bits (96), Expect = 0.007
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPTLYVGLPGLATDTQTVFQ 295
+G +A + + +A D R Q Q VS+ KV ++ P + + G+A D Q +
Sbjct: 81 HGTTTIAFCFRGGILLAVDSR-STQGQFVSSGVVQKVIEITPHILGTIAGVAGDCQFWER 139
Query: 296 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 475
L + LYEL+ + + S + + L+ + + +I+G D N P + D
Sbjct: 140 DLGRKCRLYELENGERIYASSASKLFISTLHSQSGADMSVGAMISGFDS-TNHPCIYYCD 198
Query: 476 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G +G+ S +G+ + ++ + ++ +A+ +A RDA+SG
Sbjct: 199 SEG-TRIGGYLYGAGSGSTFAFGIVDTEYDFEMTEEQAIALGKKAIYHAVSRDAMSG 254
>UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium berghei
Length = 267
Score = 41.5 bits (93), Expect = 0.017
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 25/147 (17%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV--- 289
NGG V+ + G + V +A D R + + N PK+ ++ +G G+ +D +T+
Sbjct: 38 NGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSL 97
Query: 290 ---------------------FQR-LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFG 403
F + L+ ++ L+ L+ + + +L LY RRF
Sbjct: 98 LQVLLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFF 157
Query: 404 PYFIEPVIAGLDPYDNQPYVCNMDLIG 484
PY+ ++AG+D + + + + D IG
Sbjct: 158 PYYTFNILAGIDE-NGKGVLYSYDAIG 183
>UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B
precursor; n=28; Eukaryota|Rep: Proteasome subunit beta
type-7-B precursor - Arabidopsis thaliana (Mouse-ear
cress)
Length = 274
Score = 41.5 bits (93), Expect = 0.017
Identities = 40/175 (22%), Positives = 71/175 (40%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +V + +D V + D R N K+ M P +Y G A DT+ V +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMV 98
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
++ L+ + R R T +L L+ + G V+ G+D P++ +
Sbjct: 99 SSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQ-GHVSAALVLGGVD--ITGPHLHTIYPH 155
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G + F G+ S + EA ++ L DE + +++A+ + D SG
Sbjct: 156 G-STDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSG 209
>UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core
eudicotyledons|Rep: Proteasome subunit RC5 like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 41.1 bits (92), Expect = 0.022
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
LK R +Y+ + N+ M + +LSN LY +RF PY+ V+ GLD + + V D
Sbjct: 3 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDE-EGKGCVFTYDA 61
Query: 479 IG 484
+G
Sbjct: 62 VG 63
>UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 191
Score = 40.7 bits (91), Expect = 0.030
Identities = 39/172 (22%), Positives = 67/172 (38%), Gaps = 3/172 (1%)
Frame = +2
Query: 140 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRM-- 313
MK + V ++ D R + V PKV + +Y + G + Q + ++ +
Sbjct: 1 MKYSNGVLLSADTRATMGNLVVDRFIPKVLPITDKIYTCIAGSVSHAQFLVNEVRAHLMT 60
Query: 314 NLYELKEN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCP 490
+L N M P +A +Y ++ + I G DN + C +IG
Sbjct: 61 QQMDLHANLNGMDPMVATAANIISIYLHKYREFLHAAFILG--GVDNTGFHCINSMIGGS 118
Query: 491 NEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
ED+ +SG+ + G+ + L+ P L E + L A D SG
Sbjct: 119 VLEEDYAISGSGGVFIKGLMKELYRPELTRTEAINLAHKLLKTAISLDTKSG 170
>UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family
protein; n=2; Alveolata|Rep: Proteasome A-type and
B-type family protein - Tetrahymena thermophila SB210
Length = 282
Score = 40.7 bits (91), Expect = 0.030
Identities = 29/106 (27%), Positives = 42/106 (39%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +V + +D V + D R + K+ + P +Y G A DTQ V RL
Sbjct: 40 GTTIVGLVYKDGVVLGADTRATAGTIVAEKSCSKIHYIAPNMYCCGAGTAADTQWVTDRL 99
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 439
+ L L NR R A L LY+ + G ++ G D
Sbjct: 100 SSELELMRLNTNRQSRIAGAIARLREHLYQYQ-GHVGAHLILGGFD 144
>UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 252
Score = 39.9 bits (89), Expect = 0.052
Identities = 38/176 (21%), Positives = 75/176 (42%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
+G ++M ++ + +A D R A S + K + + + G A D +
Sbjct: 37 HGTTTLSMIIKEGIIVAVDSRATRGAFISSGSVQKYIPITSHIIGTMAGGAADCAYWERE 96
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
L + L+EL+ + S ML+N+LY+ R + +I G D P++ ++
Sbjct: 97 LTRQCRLFELRNKPPISVAAASKMLANILYQYRNYNLSVGSMICGYD--KTGPHIFYVE- 153
Query: 479 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G P G+ S + ++ ++ N+ ++ E +A+ +A RD SG
Sbjct: 154 DGGVRIPGHLFSVGSGSPYAVSLIDSEYDYNMPKEKAIELARRAIFHATHRDVASG 209
>UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 235
Score = 39.1 bits (87), Expect = 0.091
Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 5/137 (3%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G VV+ + +D + + D R + ++F++G +G+ G +D Q + + L
Sbjct: 16 GTTVVSFRYRDGIIMGADTRGSYGRLAKLSGVQRIFKVGDQTLLGMSGEISDMQYLVKTL 75
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPY---DNQPYVC 466
+ ++NR + PK + M+ +LY R P + + GL+ D + +
Sbjct: 76 ----TILTQEDNRRIDPKGYHKMIQRILYSARSKISPLNLSVCVGGLNAASDGDRRTHT- 130
Query: 467 NMDLIGCPNEPEDFVVS 517
++GC N +F S
Sbjct: 131 REKMLGCVNHLGNFYFS 147
>UniRef50_UPI00003C07D6 Cluster: PREDICTED: similar to Proteasome
subunit beta type 4 precursor (Proteasome beta chain)
(Macropain beta chain) (Multicatalytic endopeptidase
complex beta chain) (Proteasome chain 3); n=1; Apis
mellifera|Rep: PREDICTED: similar to Proteasome subunit
beta type 4 precursor (Proteasome beta chain) (Macropain
beta chain) (Multicatalytic endopeptidase complex beta
chain) (Proteasome chain 3) - Apis mellifera
Length = 256
Score = 37.9 bits (84), Expect = 0.21
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +VV ++ ++ + IATD + N +V ++ + +G G D Q + +
Sbjct: 49 GTSVVGIQFKNGILIATDILGSYGSLARYRNLERVMKVNDNIILGAGGDYADYQCLKSHI 108
Query: 302 KFRMNLYE-LKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLD 439
+ ++ E L + ++PK L+ +LY RR F P++ +I GL+
Sbjct: 109 ERKILEEECLDDGLSLKPKALHCWLTRVLYNRRSQFDPFWNNFIIGGLE 157
>UniRef50_A5LHX3 Cluster: Proteasome subunit beta type-11 precursor;
n=17; Euteleostomi|Rep: Proteasome subunit beta type-11
precursor - Homo sapiens (Human)
Length = 300
Score = 37.9 bits (84), Expect = 0.21
Identities = 38/176 (21%), Positives = 73/176 (41%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
+G +A + + V A D R + KV + L G + D T ++
Sbjct: 48 HGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRV 107
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
L+ + L EL+E ++ + + +LS ++ + R + + G D + + D
Sbjct: 108 LQRELRLRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSD- 166
Query: 479 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G + + F V G+ S YG+ + + ++ E + A+ +A RDA SG
Sbjct: 167 -GTRLQGDIFSV-GSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSG 220
>UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40;
Fungi/Metazoa group|Rep: Proteasome subunit beta type-2
- Homo sapiens (Human)
Length = 201
Score = 37.5 bits (83), Expect = 0.28
Identities = 30/163 (18%), Positives = 69/163 (42%), Gaps = 2/163 (1%)
Frame = +2
Query: 131 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 310
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 311 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 484
+ LY+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYLA 122
Query: 485 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQAL 613
+ F G + + + + P + + E + + L
Sbjct: 123 ALAK-APFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCL 164
>UniRef50_Q08058 Cluster: Coenzyme Q-binding protein COQ10,
mitochondrial precursor; n=2; Saccharomyces
cerevisiae|Rep: Coenzyme Q-binding protein COQ10,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 207
Score = 37.5 bits (83), Expect = 0.28
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +2
Query: 308 RMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGC 487
R Y L++ P T A +S + + F PY ++ + +P DN+P + + +G
Sbjct: 42 REQRYVLRKAINAPPSTVYAAVSEVAQYKEFIPYCVDSFVDKRNPVDNKPLIAGL-RVGF 100
Query: 488 PNEPEDFVVSGTCSE 532
E+F+ + TC +
Sbjct: 101 KQYDEEFICNVTCKD 115
>UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 229
Score = 37.1 bits (82), Expect = 0.37
Identities = 26/98 (26%), Positives = 41/98 (41%)
Frame = +2
Query: 95 TNMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLAT 274
T I +G + K + V IA D R S + KV ++ P L + G A
Sbjct: 61 TGPKIRFLHGTTTLGFKFEHGVVIAVDSRATAGPYIASQSVKKVIEINPYLLGTMAGGAA 120
Query: 275 DTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLY 388
D + L + +YEL+ + S +L+N+LY
Sbjct: 121 DCAFWERVLAEQCRIYELRNKERISVAAASKLLANMLY 158
>UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome
subunit beta-type; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to proteasome subunit
beta-type - Strongylocentrotus purpuratus
Length = 104
Score = 37.1 bits (82), Expect = 0.37
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 344 MRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYV 463
M +AMLS +LY RRF PY+ ++AGLD P +
Sbjct: 1 MFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGELPTI 40
>UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 265
Score = 36.3 bits (80), Expect = 0.64
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +2
Query: 422 VIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETI 601
+IAG D P V + L G E F V G+ S +YG C+ + N+ +E +
Sbjct: 157 IIAGYDRKLG-PQVYGIPLGGAMME-NPFTVGGSGSAYIYGWCDDTFRENMSKEEAQAWV 214
Query: 602 SQALVNAADRDAISG 646
+A+ A RDA SG
Sbjct: 215 KRAISLAIARDASSG 229
>UniRef50_A2E5C0 Cluster: Family T1, proteasome alpha subunit,
threonine peptidase; n=2; Trichomonas vaginalis G3|Rep:
Family T1, proteasome alpha subunit, threonine peptidase
- Trichomonas vaginalis G3
Length = 238
Score = 35.5 bits (78), Expect = 1.1
Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Frame = +2
Query: 86 FYITNMSILAYNGGAVVAMKGQDCVAIATDKR--FGIQAQTVSTNFPKVFQMGPTLYVGL 259
F I + A+NG V+A++ + A +KR +Q Q S N + + +
Sbjct: 17 FQIEYAAAAAHNGTTVLAIQAPGIIVAAIEKRDMMKLQKQDSSNN---MCLLDKHILCAF 73
Query: 260 PGLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLS--NLLYERRFG--PYFIEPVI 427
GL D + + ++ +F Y L + + + ++ L Y + G P+ + +I
Sbjct: 74 TGLPADARVLVEKAQFEAQSYRLTFEDAIPIENIARYIATVQLTYTQSGGVRPFGVTTLI 133
Query: 428 AGLDPYDNQPYV 463
G DP D +P++
Sbjct: 134 CGFDPLD-KPHI 144
>UniRef50_Q09544 Cluster: ATP synthase delta chain, mitochondrial
precursor; n=2; Caenorhabditis|Rep: ATP synthase delta
chain, mitochondrial precursor - Caenorhabditis elegans
Length = 163
Score = 35.5 bits (78), Expect = 1.1
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 506 FVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
FV SGT S + G C+ L E LK +E+ E+ ++A ++AA R + G
Sbjct: 91 FVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAELDAAQRASGEG 137
>UniRef50_A4H5A4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 3728
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 152 DCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
+ +++ T + +G ++ VST+ P + GP L V L LATDT + R
Sbjct: 2015 ELLSVTTQQYYGALSRLVSTSLPAIDSGGPLLPVHLSSLATDTLSYILR 2063
>UniRef50_A6R7Q1 Cluster: Proteasome component PRE3; n=1;
Ajellomyces capsulatus NAm1|Rep: Proteasome component
PRE3 - Ajellomyces capsulatus NAm1
Length = 174
Score = 35.1 bits (77), Expect = 1.5
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 422 VIAGLDP-YDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFET 598
+IAG D + Q Y ++ L G ++ + + + G+ S +YG C+A W + +E E
Sbjct: 72 IIAGYDARHGGQVY--SIPLGGSLHK-QSYAIGGSGSTYIYGYCDANWREGMTEEEGIEF 128
Query: 599 ISQALVNAADRDAISG 646
+ +L A D SG
Sbjct: 129 VKNSLQEAIKWDGSSG 144
>UniRef50_Q0VN61 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 458
Score = 34.7 bits (76), Expect = 2.0
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -2
Query: 243 VGPIWNTFGKLVDTV*ACIPNRLSVAMATQSWPFMATTAPPLYASIDILVI*KLKHFL 70
VGP+W G+ + +P L + WP +AT PPL+A + + ++ L F+
Sbjct: 56 VGPLWQRLGRYLR-----LPFSLPLLPLLAIWPVLATLLPPLWAMVPVALVAGLPTFV 108
>UniRef50_Q4SM94 Cluster: Chromosome 3 SCAF14553, whole genome shotgun
sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF14553, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1679
Score = 34.3 bits (75), Expect = 2.6
Identities = 21/65 (32%), Positives = 25/65 (38%)
Frame = -3
Query: 632 HDLPHSPEPVRLSQRVHLASSWAPRELHTYHTAVQNRCPIPQNLQVHLGNQSSPCYRHKV 453
H PH P SQ + P +T H V P LQ LG S RH+
Sbjct: 1207 HSYPHRPASPEGSQVNVMGVHMVPGSPNTLHRTVATNTPPSPALQRRLGQASPSLARHQQ 1266
Query: 452 GYHRD 438
G +RD
Sbjct: 1267 GPNRD 1271
>UniRef50_A2QVK6 Cluster: Catalytic activity: PRE2 has a
chymotrypsin-like proteolytic activity; n=7;
Trichocomaceae|Rep: Catalytic activity: PRE2 has a
chymotrypsin-like proteolytic activity - Aspergillus
niger
Length = 379
Score = 34.3 bits (75), Expect = 2.6
Identities = 26/108 (24%), Positives = 51/108 (47%)
Frame = +2
Query: 323 ELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPE 502
+++ R + S +L+NL Y + + ++AG+ P + P + +D G P
Sbjct: 232 QIRHKRRITVAAASKILANLTYAYKGMGLSMGTMLAGMTPQEG-PALYYIDSDGT-RLPG 289
Query: 503 DFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
+ G+ YG+ +A + +L +E E ++++ A RDA SG
Sbjct: 290 NLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAMHRDAYSG 337
>UniRef50_UPI0000F2C314 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 384
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQ 454
+K R+ L L +R+M P S+ +++ FGP P++AG P D Q
Sbjct: 1 MKTRLALLPLARSRLMSPSPASSQAAHVCAHGTFGPGLDPPLLAGGFPKDKQ 52
>UniRef50_A0NHA5 Cluster: Proteasome subunit alpha type; n=1;
Anopheles gambiae str. PEST|Rep: Proteasome subunit
alpha type - Anopheles gambiae str. PEST
Length = 278
Score = 32.7 bits (71), Expect = 7.9
Identities = 19/90 (21%), Positives = 41/90 (45%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
N G V+ ++G+D V +A +K + ++F + ++ + + G+ TD + V
Sbjct: 33 NSGTVIGLRGKDGVVLAVEKLITSKLYEPDCG-TRIFTIDTSIGMAISGMITDGRAVVDI 91
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLY 388
+ Y + NR + K + LS+ +
Sbjct: 92 ARQEAASYRQQNNRPIPLKQLNDRLSSYFH 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,425,166
Number of Sequences: 1657284
Number of extensions: 14727281
Number of successful extensions: 36600
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 35438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36545
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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