Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_O06
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0903 - 25816395-25816493,25816695-25816779,25817390-258174... 246 1e-65
02_01_0614 - 4599035-4599083,4599209-4599303,4599410-4599494,460... 235 2e-62
09_04_0656 + 19267392-19267432,19267530-19267637,19269114-192691... 64 9e-11
08_02_1353 + 26335306-26335448,26336025-26336106,26336322-263364... 63 2e-10
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 49 4e-06
05_01_0588 + 5278013-5278153,5278641-5278782,5278923-5279019,527... 41 0.001
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 39 0.004
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 38 0.007
06_01_0387 - 2770387-2770514,2770963-2771063,2771152-2771255,277... 36 0.021
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 29 2.4
06_03_0023 + 15558890-15559117,15559229-15560134 29 3.2
01_03_0168 - 13397297-13397756,13397852-13397917,13397999-13398111 29 4.2
01_03_0185 - 13565903-13565932,13565933-13566013,13566104-135661... 28 5.6
10_08_1019 - 22299800-22299946,22300040-22300109,22300930-223010... 28 7.4
08_01_0319 + 2848751-2848762,2849516-2850449,2850476-2851234,285... 28 7.4
03_01_0398 + 3092577-3093857 28 7.4
08_01_0745 + 6886579-6886690,6886834-6887270 27 9.7
>06_03_0903 -
25816395-25816493,25816695-25816779,25817390-25817479,
25818566-25818673,25818771-25818952,25819032-25819216,
25820812-25820971
Length = 302
Score = 246 bits (602), Expect = 1e-65
Identities = 110/183 (60%), Positives = 147/183 (80%)
Frame = +2
Query: 101 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 280
MSI YNG AVVAM G++C AIA+D+R G+Q QTV+T+F +VF++ LY+GL GLATD
Sbjct: 114 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 173
Query: 281 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 460
QT++QRL FR LY+L+E R M+P+TF++++S LLYE+RFGPYF +PVIAGL DN+P+
Sbjct: 174 QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGE-DNEPF 232
Query: 461 VCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAI 640
+C MD IG +DFVVSGT SE LYG CE++++PN++P+ELFETISQAL ++ DRD +
Sbjct: 233 ICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCL 292
Query: 641 SGW 649
SGW
Sbjct: 293 SGW 295
>02_01_0614 -
4599035-4599083,4599209-4599303,4599410-4599494,
4600107-4600196,4600772-4600879,4600983-4601197
Length = 213
Score = 235 bits (575), Expect = 2e-62
Identities = 105/184 (57%), Positives = 144/184 (78%)
Frame = +2
Query: 98 NMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 277
++ I YNG AVVAM G++C AIA+D+R G+Q QTV+T+F +VF++ LY+GL GLATD
Sbjct: 9 SLQIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATD 68
Query: 278 TQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQP 457
QT++QRL FR LY+L+E R M+P+ F++++S LLYE+RFGPYF +PVIAGL D +P
Sbjct: 69 AQTLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDND-EP 127
Query: 458 YVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDA 637
++C MD IG +DFVVSGT SE LYG CE++++P+++P+ELFETISQAL + DRD
Sbjct: 128 FICTMDCIGAKELAKDFVVSGTASESLYGACESMYKPSMEPEELFETISQALQASVDRDC 187
Query: 638 ISGW 649
+SGW
Sbjct: 188 LSGW 191
>09_04_0656 +
19267392-19267432,19267530-19267637,19269114-19269195,
19269637-19269766,19269882-19270024,19270198-19270284,
19270384-19270458
Length = 221
Score = 64.1 bits (149), Expect = 9e-11
Identities = 35/122 (28%), Positives = 59/122 (48%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
NGG VA+ G D +A D R + ++ + K+ ++ + G D + + +
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKN 71
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 478
L R LY+ + N+ M + +LSN LY +RF PY+ V+ GLD + + V D
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS-EGKGCVFTYDA 130
Query: 479 IG 484
+G
Sbjct: 131 VG 132
>08_02_1353 +
26335306-26335448,26336025-26336106,26336322-26336451,
26336486-26336548,26336549-26336691,26336827-26336913,
26337014-26337088
Length = 240
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/107 (30%), Positives = 51/107 (47%)
Frame = +2
Query: 119 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 298
NGG VA+ G D +A D R + +S + K+ + + G D + + +
Sbjct: 10 NGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGDVKALQRN 69
Query: 299 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 439
L + LYE N+ M + +LSN LY +RF PY+ V+ GLD
Sbjct: 70 LTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 116
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 48.8 bits (111), Expect = 4e-06
Identities = 36/175 (20%), Positives = 77/175 (44%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +V + V +A D R + K+ Q+ +YV G A DTQ + + +
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISEYV 84
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
++ ++ + ++ + K + ++ L Y+ + ++ G D Y+ + ++ L
Sbjct: 85 RYFLHQHTIQLGQPATVKVAANLIRLLAYQNK-NMLQAGMIVGGWDKYEG-GQIFSVPLG 142
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G + F + G+ S LYG+ + W+ + +E + + + + A RD SG
Sbjct: 143 GTILR-QPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKFVVKVVSLAIARDGASG 196
>05_01_0588 +
5278013-5278153,5278641-5278782,5278923-5279019,
5279130-5279199,5279284-5279388,5279531-5279629,
5280062-5280152,5280238-5280311
Length = 272
Score = 40.7 bits (91), Expect = 0.001
Identities = 39/175 (22%), Positives = 70/175 (40%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G +V + QD V + D R N K+ M P +Y G A DT+ V +
Sbjct: 38 GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMV 97
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 481
++ L+ R R T +L + L+ + G V+ G+D P++ +
Sbjct: 98 SSQLQLHRYATGRESRVVTSLTLLKSHLFSYQ-GHVSAALVLGGVDV--TGPHLHTVYPH 154
Query: 482 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
G + F G+ S + E+ ++ L +E + +++A+ D SG
Sbjct: 155 G-STDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLVAEAIRGGIFNDLGSG 208
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G A V ++G D V + +K+ + Q S + K+ + + + GL D + + R
Sbjct: 30 GNAAVGVRGSDTVVLGVEKKSTPKLQD-SRSVRKIASLDTHIALACAGLKADARVLINRA 88
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLL--YERRFG--PYFIEPVIAGLDPYDNQPYVCN 469
+ + L + + + ++ L Y + G P+ + +I G DPY ++P +
Sbjct: 89 RVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQ 148
Query: 470 MDLIG 484
D G
Sbjct: 149 TDPSG 153
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Frame = +2
Query: 122 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 301
G A V ++G D V + +K+ + Q S + K+ + + + GL D + + R
Sbjct: 100 GNAAVGVRGTDTVVLGVEKKSTPKLQD-SRSMRKIASLDTHIALACAGLKADARVLINRA 158
Query: 302 KFRMNLYELKENRMMRPKTFSAMLSNLL--YERRFG--PYFIEPVIAGLDPYDNQPYVCN 469
+ + L + + + ++ L Y + G P+ + +I G DPY +P +
Sbjct: 159 RVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQ 218
Query: 470 MDLIG 484
D G
Sbjct: 219 TDPSG 223
>06_01_0387 -
2770387-2770514,2770963-2771063,2771152-2771255,
2771345-2771507,2771550-2771596,2772818-2772946
Length = 223
Score = 36.3 bits (80), Expect = 0.021
Identities = 33/114 (28%), Positives = 51/114 (44%)
Frame = +2
Query: 305 FRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 484
F+ L+EL R + S +L+N+LY R I +IAG D + P + +D G
Sbjct: 67 FQCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWD--EKGPGLYYVDSEG 124
Query: 485 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 646
F V G+ S YG+ + + + +E E +A+ A RD SG
Sbjct: 125 ARLMGSRFSV-GSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASG 177
>06_03_0099 +
16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 124 GCGSRHEGPRLCGHRYGQAVW 186
GCG R + PRL G Q VW
Sbjct: 159 GCGPRRDAPRLVGRAVRQEVW 179
>06_03_0023 + 15558890-15559117,15559229-15560134
Length = 377
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -2
Query: 165 MATQSWPFMATTAPPLYASIDILVI 91
++T +WPF+A A L S+D +++
Sbjct: 4 LSTAAWPFLAAVAAALLCSVDAVIV 28
>01_03_0168 - 13397297-13397756,13397852-13397917,13397999-13398111
Length = 212
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 617 SPEPVRLSQRVHLASSWAPRELHTYHTAVQ 528
SP PV S R H+ +W P+ T+ + V+
Sbjct: 51 SPSPVATSNREHIIPNWVPQIEMTFSSVVE 80
>01_03_0185 -
13565903-13565932,13565933-13566013,13566104-13566175,
13566800-13566932,13567068-13567107,13567192-13567258,
13567453-13567719
Length = 229
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 434 LDPYDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEA 556
LD ++ +D+ PN+ E+ + C QLYG+ EA
Sbjct: 123 LDRFEEGAEQFRLDVAANPNDTEESIWCFLCEAQLYGVDEA 163
>10_08_1019 -
22299800-22299946,22300040-22300109,22300930-22301066,
22301142-22301195,22301638-22301694,22301814-22301846,
22301942-22302067,22302162-22302815,22303042-22303166,
22303770-22303935
Length = 522
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = -3
Query: 608 PVRLSQRVHLASSWAPRELHTYHTAVQNRCPIPQNLQVHLGNQSSPCYRH 459
P+R + A++ A + +H +HT +++ QV G+ S+ H
Sbjct: 197 PLREREEAAAAAAAAAKRIHDHHTPAESKAEAASEPQVSAGDHSTQSSDH 246
>08_01_0319 +
2848751-2848762,2849516-2850449,2850476-2851234,
2851793-2851850,2851900-2852179
Length = 680
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 159 WPSLRTSGLVYKLKQYQPTSQKYSKWDPHCM*AFPVSRLTPKLY 290
W LRT+ + ++ TSQKYS+W P C P P LY
Sbjct: 589 WMDLRTTKGIIRVVA-GGTSQKYSQWLPACHLDSP-REFQPNLY 630
>03_01_0398 + 3092577-3093857
Length = 426
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 470 MDLIGCPNEPEDFVVSGTCSEQLY 541
++L P++P DFVVSG+ S++ +
Sbjct: 146 LNLCASPSDPADFVVSGSWSDKAF 169
>08_01_0745 + 6886579-6886690,6886834-6887270
Length = 182
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 353 KTFSAMLSNLLYERRFGPYFIE 418
+ FS LSNL Y R GPY+++
Sbjct: 130 REFSHTLSNLDYSRWLGPYYLD 151
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,614,117
Number of Sequences: 37544
Number of extensions: 399026
Number of successful extensions: 905
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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