Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_O01
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    35   5e-04
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    35   5e-04
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   3.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   3.0  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 34.7 bits (76), Expect = 5e-04
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +1

Query: 175 NFFKNKLKLMSFLRKRCNVNPARGPFHFRAP--SKILWKTVRGMI 303
           N+ K  ++ +SF  K CN+     P+ F  P   K LWK ++G++
Sbjct: 5   NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVV 49


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 34.7 bits (76), Expect = 5e-04
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +1

Query: 175 NFFKNKLKLMSFLRKRCNVNPARGPFHFRAP--SKILWKTVRGMI 303
           N+ K  ++ +SF  K CN+     P+ F  P   K LWK ++G++
Sbjct: 5   NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVV 49


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -2

Query: 359 PSYVRSLLRAFLPRSVLCGIMPLTVFH 279
           PS+  S +R+FL  +    ++P  ++H
Sbjct: 34  PSFKLSKIRSFLNITASAVLLPFAIYH 60


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/27 (29%), Positives = 11/27 (40%)
 Frame = -3

Query: 541 HLLTACPSSCLQAYEQHHGISIQFHGT 461
           H L   P  C     +H G+  + H T
Sbjct: 351 HKLLTAPQQCSTLLLRHEGVLAEAHST 377


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +1

Query: 37  RALAIKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFK 186
           R  A +  VI+ RG +LG L A++  +++     +      IN    FFK
Sbjct: 318 RFYAARFFVIN-RGTILGILDAIVTFLIVMIQFEMTQNSTNINFVSTFFK 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,746
Number of Sequences: 336
Number of extensions: 2673
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)