Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_N20
         (630 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0480 + 3616123-3617506,3618033-3618166,3618578-3618818,361...    33   0.14 
01_01_1152 + 9170628-9171899                                           32   0.33 
09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697...    30   1.3  

>07_01_0480 +
           3616123-3617506,3618033-3618166,3618578-3618818,
           3618912-3619120,3619234-3619265,3619363-3619474,
           3619609-3619890
          Length = 797

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +1

Query: 328 LKFLVLAIVPLSFAQNIPKATN--LHNGLTEKIGNFSIELLYHTSNLEQSKGN 480
           ++FL   I+P  FA N+ K TN  L   L  KIG+++I +L  T   E   GN
Sbjct: 610 IQFLHGGIIPGLFANNL-KITNILLDQNLVAKIGSYNIPILSETMKSEGGSGN 661


>01_01_1152 + 9170628-9171899
          Length = 423

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = +1

Query: 478 NLIMSPITVWTVLAVIAEGASGNTRRQI 561
           N I+SP++    LA++A+GA G T+R++
Sbjct: 60  NFIVSPLSFHAALALVADGARGETQREL 87


>09_06_0020 -
           20267190-20267612,20269086-20269495,20269573-20269747,
           20270833-20271066,20271164-20271265,20271354-20272091,
           20272204-20272321,20272417-20272667,20272768-20272932
          Length = 871

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 564 IDLPSRIPRRAFSYYRQNRPNGDW 493
           + LP  +P+R F Y R  +  GDW
Sbjct: 677 VRLPGTLPQRVFDYLRDEQRRGDW 700


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,758,584
Number of Sequences: 37544
Number of extensions: 287619
Number of successful extensions: 615
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)