Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_N18
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050463-1|AAH50463.1|  953|Homo sapiens conserved nuclear prote...    49   1e-05
BC001584-1|AAH01584.1|  718|Homo sapiens LOC124245 protein protein.    49   1e-05
AY393011-1|AAS85949.1|   77|Homo sapiens immunoglobulin heavy ch...    31   4.7  
BC009341-1|AAH09341.1|  230|Homo sapiens chromosome 21 open read...    30   8.3  
AF391113-1|AAL34504.1|  230|Homo sapiens C21orf70 isoform A prot...    30   8.3  

>BC050463-1|AAH50463.1|  953|Homo sapiens conserved nuclear protein
            NHN1 protein.
          Length = 953

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 27/53 (50%), Positives = 32/53 (60%)
 Frame = +2

Query: 212  KESSIEKEMPSRKRSTSSPVNVPPAKKPVSRREELLKQLKAVEDAIARKRSKI 370
            K SS    +P +     +          +SRREELLKQLKAVEDAIARKR+KI
Sbjct: 897  KSSSKVTSVPGKASDPGAASTKSGKASTLSRREELLKQLKAVEDAIARKRAKI 949


>BC001584-1|AAH01584.1|  718|Homo sapiens LOC124245 protein protein.
          Length = 718

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 27/53 (50%), Positives = 32/53 (60%)
 Frame = +2

Query: 212 KESSIEKEMPSRKRSTSSPVNVPPAKKPVSRREELLKQLKAVEDAIARKRSKI 370
           K SS    +P +     +          +SRREELLKQLKAVEDAIARKR+KI
Sbjct: 662 KSSSKVTSVPGKASDPGAASTKSGKASTLSRREELLKQLKAVEDAIARKRAKI 714


>AY393011-1|AAS85949.1|   77|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 77

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 75  VRRPHRAVREHAGPGTPGYSMRPR 146
           VR+ H  +REH+GPG PG  + PR
Sbjct: 33  VRQEH--LREHSGPGLPGQGLLPR 54


>BC009341-1|AAH09341.1|  230|Homo sapiens chromosome 21 open reading
           frame 70 protein.
          Length = 230

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/60 (25%), Positives = 34/60 (56%)
 Frame = +2

Query: 188 AVSTVTSKKESSIEKEMPSRKRSTSSPVNVPPAKKPVSRREELLKQLKAVEDAIARKRSK 367
           +V++V   +  S  + +PS +R   +   +P  +K   RRE+ L++++A++ A  + R +
Sbjct: 73  SVTSVRRGEAGSSARSVPSIRRGAEAKTVLPKKEKMKLRREQWLQKIEAIKLAEQKHREE 132


>AF391113-1|AAL34504.1|  230|Homo sapiens C21orf70 isoform A protein
           protein.
          Length = 230

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/60 (25%), Positives = 34/60 (56%)
 Frame = +2

Query: 188 AVSTVTSKKESSIEKEMPSRKRSTSSPVNVPPAKKPVSRREELLKQLKAVEDAIARKRSK 367
           +V++V   +  S  + +PS +R   +   +P  +K   RRE+ L++++A++ A  + R +
Sbjct: 73  SVTSVRRGEAGSSARSVPSIRRGAEAKTVLPKKEKMKLRREQWLQKIEAIKLAEQKHREE 132


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,206,808
Number of Sequences: 237096
Number of extensions: 1437985
Number of successful extensions: 3616
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3616
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)