Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_N16
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.3  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   1.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.7  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.9  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +3

Query: 222 GKLL-FLGLDNAGKTTLLHML 281
           G+LL  LG   AGKTTLL+ L
Sbjct: 104 GELLAILGSSGAGKTTLLNTL 124


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +3

Query: 222 GKLL-FLGLDNAGKTTLLHML 281
           G+LL  LG   AGKTTLL+ L
Sbjct: 104 GELLAILGSSGAGKTTLLNTL 124


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -3

Query: 298 ASLSSFNICKSVVFPALSSPRNKSLPDFFHRPRNPNT 188
           A+ SSF IC   V+P +     + L D F     P T
Sbjct: 2   AAASSFFICILGVYPEIQEKVYQELRDIFQDSDRPIT 38


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 15/49 (30%), Positives = 18/49 (36%)
 Frame = -1

Query: 543 RESAQGSY*ASRQ*ATSLVQPWTPADVAGHTRRPGTLSRPPRGSSRATH 397
           R S      +SR   TS     T A        PG  S+PP  +S   H
Sbjct: 88  RTSTSNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQPPTDNSHVHH 136


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +3

Query: 234  FLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFD 371
            F G   +GK  L++ ++ +     V   +    E SI S ++TT D
Sbjct: 864  FRGSCGSGKYPLINAMRQELEGYKVKLEYDGPYETSISSGQYTTKD 909


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = -1

Query: 633 LFPFQWSADTD*KSDVVRLHWQHRVYQSCCRESAQGSY*ASR 508
           +F  +W    D + D +R +W  +  +    + A G Y  +R
Sbjct: 198 IFQKKWRGYEDFRRDFLRTYWSAKRQRDIRFQIATGRYDETR 239


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -3

Query: 247 SSPRNKSLPDFFHRPRNPNTPVNQSRINIFEYN*IELY 134
           S  +NKSL  F    RN +TP+     ++ + + IE Y
Sbjct: 413 SDYQNKSLAAFDFVARNSDTPIILWTSHLTQADVIEKY 450


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 382 CPPRSNVVKRILP 344
           CPP+   +KR+LP
Sbjct: 53  CPPQGVDLKRVLP 65


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
          protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 85 VICYVVKWII 56
          VICYV  W I
Sbjct: 26 VICYVASWAI 35


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 322 GCKVGTC*ASLSSFNIC 272
           GCK G C   ++S  +C
Sbjct: 139 GCKKGVCTMEINSDTMC 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,344
Number of Sequences: 336
Number of extensions: 2950
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)