Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_N14
(651 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55806 Cluster: PREDICTED: similar to CG4447-PA;... 184 1e-45
UniRef50_Q9VSW4 Cluster: CG4447-PA; n=5; Diptera|Rep: CG4447-PA ... 181 2e-44
UniRef50_UPI00015B4B50 Cluster: PREDICTED: similar to GA18189-PA... 175 8e-43
UniRef50_UPI0000DB7122 Cluster: PREDICTED: similar to CG4447-PA;... 131 1e-29
UniRef50_Q96E11 Cluster: Ribosome recycling factor, mitochondria... 117 3e-25
UniRef50_Q6GMJ7 Cluster: Mitochondrial ribosome recycling factor... 115 1e-24
UniRef50_P91478 Cluster: Uncharacterized protein T20F5.3; n=3; C... 75 1e-12
UniRef50_A7S3V4 Cluster: Predicted protein; n=1; Nematostella ve... 74 3e-12
UniRef50_Q6NQM0 Cluster: At3g01800; n=8; Magnoliophyta|Rep: At3g... 66 9e-10
UniRef50_A6VUS5 Cluster: Ribosome recycling factor; n=33; Proteo... 62 8e-09
UniRef50_Q46293 Cluster: Ribosome recycling factor; n=18; Bacter... 62 1e-08
UniRef50_Q9RU82 Cluster: Ribosome recycling factor; n=2; Deinoco... 62 1e-08
UniRef50_A6GAJ7 Cluster: Ribosome recycling factor; n=2; Bacteri... 60 5e-08
UniRef50_Q5FPZ4 Cluster: Ribosome recycling factor; n=74; Bacter... 60 5e-08
UniRef50_O82853 Cluster: Ribosome recycling factor; n=45; Proteo... 58 2e-07
UniRef50_A6EUT8 Cluster: Ribosome recycling factor; n=2; Gammapr... 58 2e-07
UniRef50_P0A808 Cluster: Ribosome recycling factor; n=59; Gammap... 58 2e-07
UniRef50_Q7WJ91 Cluster: Ribosome recycling factor; n=60; Bacter... 58 2e-07
UniRef50_A6EM17 Cluster: Ribosome releasing factor; n=1; unident... 56 1e-06
UniRef50_Q7XY97 Cluster: Ribosome recycling factor; n=2; cellula... 56 1e-06
UniRef50_Q8GRF5 Cluster: Ribosome recycling factor; n=34; Gammap... 56 1e-06
UniRef50_Q98MB8 Cluster: Ribosome recycling factor; n=4; Alphapr... 56 1e-06
UniRef50_A0Q0R7 Cluster: Ribosome recycling factor; n=8; Bacteri... 54 3e-06
UniRef50_Q3A398 Cluster: Ribosome recycling factor; n=4; Bacteri... 53 7e-06
UniRef50_A6DHK3 Cluster: Ribosome releasing factor; n=1; Lentisp... 53 7e-06
UniRef50_A5GSA4 Cluster: Ribosome recycling factor; n=6; cellula... 52 1e-05
UniRef50_Q831V2 Cluster: Ribosome recycling factor; n=19; Bacter... 52 1e-05
UniRef50_Q9PIR0 Cluster: Ribosome recycling factor; n=28; Epsilo... 51 2e-05
UniRef50_Q014Z6 Cluster: COG0233: Ribosome recycling factor; n=2... 50 5e-05
UniRef50_Q2S6J3 Cluster: Ribosome recycling factor; n=1; Salinib... 50 6e-05
UniRef50_A4ECK2 Cluster: Putative uncharacterized protein; n=1; ... 50 6e-05
UniRef50_Q7UTH0 Cluster: Ribosome recycling factor; n=4; Plancto... 48 1e-04
UniRef50_Q88VJ7 Cluster: Ribosome recycling factor; n=94; Bacter... 48 2e-04
UniRef50_Q9M1X0 Cluster: Ribosome recycling factor, chloroplast ... 48 2e-04
UniRef50_Q47S50 Cluster: Ribosome recycling factor; n=2; Actinom... 48 3e-04
UniRef50_Q1Q2J2 Cluster: Similar to ribosome recycling factor; n... 48 3e-04
UniRef50_Q9X1B9 Cluster: Ribosome recycling factor; n=5; Bacteri... 48 3e-04
UniRef50_A7H725 Cluster: Ribosome recycling factor precursor; n=... 47 3e-04
UniRef50_O66928 Cluster: Ribosome recycling factor; n=2; Aquifex... 46 6e-04
UniRef50_Q4FM67 Cluster: Ribosome recycling factor; n=2; Candida... 46 8e-04
UniRef50_Q1E595 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q8EQV0 Cluster: Ribosome recycling factor; n=40; Bacter... 46 0.001
UniRef50_Q6U200 Cluster: Ribosome recycling factor; n=1; Helicob... 45 0.001
UniRef50_A7CYY7 Cluster: Ribosome recycling factor; n=1; Opituta... 44 0.002
UniRef50_Q8R5Z9 Cluster: Ribosome recycling factor; n=4; Bacteri... 44 0.002
UniRef50_Q7VD62 Cluster: Ribosome recycling factor; n=30; Cyanob... 44 0.003
UniRef50_O51147 Cluster: Ribosome recycling factor; n=3; Borreli... 44 0.004
UniRef50_O83613 Cluster: Ribosome recycling factor; n=2; Bacteri... 43 0.006
UniRef50_P61308 Cluster: Ribosome recycling factor; n=3; Candida... 43 0.006
UniRef50_A5UUU9 Cluster: Ribosome recycling factor; n=4; Bacteri... 43 0.007
UniRef50_P61302 Cluster: Ribosome recycling factor; n=36; Bacter... 43 0.007
UniRef50_Q3ZZC4 Cluster: Ribosome recycling factor; n=3; Dehaloc... 42 0.010
UniRef50_Q6BLC3 Cluster: Ribosomal recycling factor, mitochondri... 42 0.010
UniRef50_Q55G90 Cluster: Putative uncharacterized protein; n=1; ... 41 0.022
UniRef50_Q8D2G5 Cluster: Ribosome recycling factor; n=1; Wiggles... 40 0.052
UniRef50_Q2GCI7 Cluster: Ribosome recycling factor; n=1; Neorick... 38 0.16
UniRef50_Q6CTR7 Cluster: Ribosomal recycling factor, mitochondri... 38 0.21
UniRef50_P75161 Cluster: Ribosome recycling factor; n=3; Mycopla... 38 0.28
UniRef50_A7EK01 Cluster: Predicted protein; n=2; Sclerotiniaceae... 37 0.36
UniRef50_Q9Z7K6 Cluster: Ribosome recycling factor; n=7; Chlamyd... 37 0.36
UniRef50_Q8RB62 Cluster: Pyruvate:ferredoxin oxidoreductase and ... 36 0.84
UniRef50_A1THV8 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_UPI000049844A Cluster: hypothetical protein 24.t00040; ... 34 3.4
UniRef50_A7CRE3 Cluster: ATP-dependent DNA helicase RecQ; n=1; O... 34 3.4
UniRef50_A7TJC1 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_UPI0000F20468 Cluster: PREDICTED: similar to G PROTEIN-... 33 7.8
UniRef50_UPI000065FD2A Cluster: Novel protein similar to mitocho... 33 7.8
>UniRef50_UPI0000D55806 Cluster: PREDICTED: similar to CG4447-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG4447-PA - Tribolium castaneum
Length = 262
Score = 184 bits (449), Expect = 1e-45
Identities = 86/154 (55%), Positives = 114/154 (74%)
Frame = +2
Query: 188 TYVRNYAXXXXXXXXXXXXXXXVEINMAVLSELIPVDKMKDRCSAAIENMKADFAKHLSI 367
T+VR YA V +N + LSE++ V+ +K + A++ +K D+ KHLS+
Sbjct: 51 TFVRKYAKGKDRKKEKGKAK--VHVNESQLSEIVNVESLKTQMQKAVDLLKEDYVKHLSV 108
Query: 368 RSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNL 547
R+TTGS+++IPV+ +GK + LQELAQI+RKNPKT+VIN S FPQ IP ALKAI SG+NL
Sbjct: 109 RTTTGSVESIPVELDGKTHSLQELAQIIRKNPKTLVINMSVFPQAIPAALKAIEKSGMNL 168
Query: 548 NPQQDGTTLFVPVPKVTKEHREALAKNAKVLYIK 649
NPQQDGTTLF+P+PKVT EHRE LAK+AK ++IK
Sbjct: 169 NPQQDGTTLFIPIPKVTTEHRENLAKSAKTMFIK 202
>UniRef50_Q9VSW4 Cluster: CG4447-PA; n=5; Diptera|Rep: CG4447-PA -
Drosophila melanogaster (Fruit fly)
Length = 254
Score = 181 bits (440), Expect = 2e-44
Identities = 81/132 (61%), Positives = 104/132 (78%)
Frame = +2
Query: 254 VEINMAVLSELIPVDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQ 433
VEIN L E++ D + + ++ MK DF KHLS+RST+G+IDT+ +K +G+E+ELQ
Sbjct: 64 VEINEQQLREILNFDGLNSQMQKSVMQMKEDFVKHLSLRSTSGAIDTLRIKVDGQEHELQ 123
Query: 434 ELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHRE 613
ELAQI RKNPKTI++N FPQ IP+ LKAI SG+NLNPQQDGTTLF+P+PKVTKEHRE
Sbjct: 124 ELAQISRKNPKTIIVNMIGFPQTIPDVLKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRE 183
Query: 614 ALAKNAKVLYIK 649
L+KNAK L++K
Sbjct: 184 NLSKNAKALFVK 195
>UniRef50_UPI00015B4B50 Cluster: PREDICTED: similar to GA18189-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA18189-PA - Nasonia vitripennis
Length = 240
Score = 175 bits (426), Expect = 8e-43
Identities = 81/131 (61%), Positives = 106/131 (80%)
Frame = +2
Query: 257 EINMAVLSELIPVDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQE 436
++++ L EL+ VD + + S AIENMKADF K+L++RSTTGS++ IPVK + KEY++QE
Sbjct: 50 KLDLRELGELLDVDDLTSQMSQAIENMKADFIKNLTLRSTTGSLEQIPVKVDDKEYQIQE 109
Query: 437 LAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREA 616
LAQI RK PK I++N SSFP IP LKAI SGLN+NPQQ+GTTL++P+PKVTKEHRE
Sbjct: 110 LAQIARK-PKLIILNVSSFPTAIPHILKAIQKSGLNINPQQEGTTLYLPIPKVTKEHREN 168
Query: 617 LAKNAKVLYIK 649
L+KNAK +YI+
Sbjct: 169 LSKNAKAIYIR 179
>UniRef50_UPI0000DB7122 Cluster: PREDICTED: similar to CG4447-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG4447-PA
- Apis mellifera
Length = 317
Score = 131 bits (317), Expect = 1e-29
Identities = 58/132 (43%), Positives = 91/132 (68%)
Frame = +2
Query: 254 VEINMAVLSELIPVDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQ 433
+ +N+ + ++I VD M R IE K K+L +R+ G+I+ + + FE +E++L+
Sbjct: 70 IHVNLDEIRDIIKVDHMISRFDGTIEKYKDQMIKNLPLRTRIGAIEQLTITFEDEEHKLE 129
Query: 434 ELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHRE 613
EL +I RK P I++N S+FPQ++P L+A+S S +NLNPQQ+GTT+++P+PK+TKEHRE
Sbjct: 130 ELVEINRK-PNMIILNVSAFPQIVPSILEALSKSQMNLNPQQEGTTIYIPIPKITKEHRE 188
Query: 614 ALAKNAKVLYIK 649
L K AK + K
Sbjct: 189 VLTKMAKQYFNK 200
>UniRef50_Q96E11 Cluster: Ribosome recycling factor, mitochondrial
precursor; n=28; Euteleostomi|Rep: Ribosome recycling
factor, mitochondrial precursor - Homo sapiens (Human)
Length = 262
Score = 117 bits (281), Expect = 3e-25
Identities = 56/147 (38%), Positives = 92/147 (62%)
Frame = +2
Query: 194 VRNYAXXXXXXXXXXXXXXXVEINMAVLSELIPVDKMKDRCSAAIENMKADFAKHLSIRS 373
VR++A V IN A++ ++I ++++ + + IE +K +F K L+IR+
Sbjct: 52 VRHFATKKAKAKGKGQSQTRVNINAALVEDIINLEEVNEEMKSVIEALKDNFNKTLNIRT 111
Query: 374 TTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNP 553
+ GS+D I V + L +++QI K+P+ I++N +SFP+ A+KAI SG+NLNP
Sbjct: 112 SPGSLDKIAVVTADGKLALNQISQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNP 171
Query: 554 QQDGTTLFVPVPKVTKEHREALAKNAK 634
+ +GT + VP+P+VT+EHRE L K AK
Sbjct: 172 EVEGTLIRVPIPQVTREHREMLVKLAK 198
>UniRef50_Q6GMJ7 Cluster: Mitochondrial ribosome recycling factor;
n=4; Deuterostomia|Rep: Mitochondrial ribosome recycling
factor - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 257
Score = 115 bits (276), Expect = 1e-24
Identities = 63/184 (34%), Positives = 106/184 (57%), Gaps = 1/184 (0%)
Frame = +2
Query: 86 ILQRLIVSTF-INNVTPRRQLRLCEKIVCAHNLNTTYVRNYAXXXXXXXXXXXXXXXVEI 262
+L R + S F I +T R L + C L Y R+YA V I
Sbjct: 12 VLYRSLPSVFRIPRLTSSRVSFLPQVSQCPVAL-PNYARHYATKKSKAKAKGQTAK-VNI 69
Query: 263 NMAVLSELIPVDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELA 442
N A++ ++I ++++K+ +A + +K DF+++LS+R++ G++D I V + ++ L +L
Sbjct: 70 NAALVEDIISLEEVKEDMAAVLAALKDDFSRNLSVRTSPGALDHITVTTKDGKFPLNQLG 129
Query: 443 QIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALA 622
QI K+P+ +V+N + FP+ + +A+ S + LNP+ +GT + VPVPKVT+EHRE L
Sbjct: 130 QISMKSPQLLVVNMTGFPEAMVAVTRALRESSMGLNPEVEGTIIRVPVPKVTREHRENLV 189
Query: 623 KNAK 634
K AK
Sbjct: 190 KLAK 193
>UniRef50_P91478 Cluster: Uncharacterized protein T20F5.3; n=3;
Caenorhabditis|Rep: Uncharacterized protein T20F5.3 -
Caenorhabditis elegans
Length = 238
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Frame = +2
Query: 344 DFAKHLSIRSTTGSIDTIPVKFE-GKEYELQELAQIVRKNPKTIVINFSSFPQVIPEALK 520
+ +H S++ + + VK E GK+ L +A++ K+P I+INF P I A
Sbjct: 74 ELTRHFSLKVDIRQYEDVMVKLENGKDKPLSMIARVTLKSPLMIMINFQDNPSAIKAAKL 133
Query: 521 AISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
AI S LN+ PQQ+G L+V VP ++KE RE +A +AK
Sbjct: 134 AIQKSTLNVTPQQEGAVLYVNVPPMSKERREKMASDAK 171
>UniRef50_A7S3V4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 191
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/117 (32%), Positives = 63/117 (53%)
Frame = +2
Query: 284 LIPVDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNP 463
L+ K+K + I+ +K D+ ++++ ++D I V + L ELA+I K
Sbjct: 10 LVDFSKIKANMESTIDKLKQDYTSKITVQILPDALDNIRVTTRSGKSTLAELAEIRMKGD 69
Query: 464 KTIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
VI+ SS P+ A +AI S +N P D TT+ + +PKVT+E+R+ L K A+
Sbjct: 70 NMFVIDMSSSPKDTKAAAQAIKESRINFEPVVDNTTITISIPKVTQEYRQDLVKLAR 126
>UniRef50_Q6NQM0 Cluster: At3g01800; n=8; Magnoliophyta|Rep:
At3g01800 - Arabidopsis thaliana (Mouse-ear cress)
Length = 267
Score = 65.7 bits (153), Expect = 9e-10
Identities = 38/102 (37%), Positives = 56/102 (54%)
Frame = +2
Query: 320 AAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQ 499
AAI+ + D K + R+ G +D I V+ G + L LA + +PKT+ +N P
Sbjct: 99 AAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYD-PD 157
Query: 500 VIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAK 625
+ E KAI +S L LNP+ DG L +P +TKEH +A+ K
Sbjct: 158 TVKELEKAIVASPLGLNPKLDGQRLVASIPALTKEHIQAMCK 199
>UniRef50_A6VUS5 Cluster: Ribosome recycling factor; n=33;
Proteobacteria|Rep: Ribosome recycling factor -
Marinomonas sp. MWYL1
Length = 185
Score = 62.5 bits (145), Expect = 8e-09
Identities = 34/110 (30%), Positives = 63/110 (57%)
Frame = +2
Query: 305 KDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINF 484
+DR S A+ ++++ F K + R+ +D++ V + G E L ++A I ++ +T+ ++
Sbjct: 10 EDRMSKAVASVESAFKKIRTGRAHPSILDSVKVNYYGSETPLSQVANITVEDARTLGVSP 69
Query: 485 SSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
++PE KAI S L LNP +G + +P+P +T+E R+ K AK
Sbjct: 70 WE-NNLVPEIEKAIMKSDLGLNPATNGNLIRIPMPALTEETRKNYFKQAK 118
>UniRef50_Q46293 Cluster: Ribosome recycling factor; n=18;
Bacteria|Rep: Ribosome recycling factor - Clostridium
perfringens
Length = 185
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/114 (29%), Positives = 62/114 (54%)
Frame = +2
Query: 293 VDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTI 472
+ K +++ + I ++ ++ A + R+ +D I V++ G L ++A + P+ +
Sbjct: 6 IKKSEEKMNKTINSLNSELATMKAGRANPTMLDRIQVEYYGSMCPLNQVANVSSPEPRLL 65
Query: 473 VINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
VI P ++ E KAI S L +NP DGT + + VP++T+E R+ L KN K
Sbjct: 66 VITPWEKP-MLKEIEKAILKSDLGINPNNDGTIIRLLVPELTEETRKNLVKNVK 118
>UniRef50_Q9RU82 Cluster: Ribosome recycling factor; n=2;
Deinococcus|Rep: Ribosome recycling factor - Deinococcus
radiodurans
Length = 183
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/110 (31%), Positives = 60/110 (54%)
Frame = +2
Query: 305 KDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINF 484
+++ + AIE + + + + R+ G + I V + G + + ++A I +P+T+VI
Sbjct: 12 REKMNKAIEAFENNLSVLRTGRANPGILKKIVVDYYGSQMPIDQVASITTPDPRTLVITP 71
Query: 485 SSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
+ P KAI S L LNP G T+F+ +P +T+E R+ L KNAK
Sbjct: 72 WDRGALNPIE-KAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAK 120
>UniRef50_A6GAJ7 Cluster: Ribosome recycling factor; n=2;
Bacteria|Rep: Ribosome recycling factor - Plesiocystis
pacifica SIR-1
Length = 185
Score = 60.1 bits (139), Expect = 5e-08
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Frame = +2
Query: 305 KDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVIN- 481
+D +A E + + ++ + R+ +D + V+ G + L+E+A + + + +++
Sbjct: 10 EDAMKSAQERLARELSRVRAGRANPALLDGVRVEAYGVQMSLREVATVSTADARLLIVKP 69
Query: 482 FSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
F + I KAI +SGL LNP DG L VP+P +T+E R +L K K
Sbjct: 70 FDA--NTISSVEKAIMNSGLGLNPSSDGVVLRVPIPPLTEERRRSLVKQVK 118
>UniRef50_Q5FPZ4 Cluster: Ribosome recycling factor; n=74;
Bacteria|Rep: Ribosome recycling factor - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 188
Score = 60.1 bits (139), Expect = 5e-08
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Frame = +2
Query: 269 AVLSELIPVDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQI 448
A L++L+ + R AIE+++ D + S R++ ++ + V+ G E L ++ I
Sbjct: 3 AALNDLLA--DLTRRMDGAIESLRRDLSGLRSGRASPNLLEPVRVEAYGSEVPLSQVGSI 60
Query: 449 VRKNPKTIVINFSSFPQVIPEAL-KAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAK 625
P+ ++ S + + + A+ +AI SGL LNP DG T+ VP+P +T+E R LA+
Sbjct: 61 AV--PEARMLTVSVWDRTVVGAVERAIRDSGLGLNPSTDGQTVRVPIPALTEERRNELAR 118
Query: 626 NA 631
A
Sbjct: 119 AA 120
>UniRef50_O82853 Cluster: Ribosome recycling factor; n=45;
Proteobacteria|Rep: Ribosome recycling factor -
Pseudomonas aeruginosa
Length = 185
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/111 (29%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Frame = +2
Query: 305 KDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINF 484
++R +E + FAK + R+ +D++ V + G + L+++A + ++ +T+ +
Sbjct: 10 QERMGKTLEALGHAFAKIRTGRAHPSILDSVMVSYYGADTPLRQVANVTVEDSRTLAL-- 67
Query: 485 SSFPQVIPEAL-KAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
+ F + + +A+ KAI +S L LNP GTT+ VP+P +T+E R+ K A+
Sbjct: 68 AVFDKSMIQAVEKAIMTSDLGLNPATAGTTIRVPMPALTEETRKGYTKQAR 118
>UniRef50_A6EUT8 Cluster: Ribosome recycling factor; n=2;
Gammaproteobacteria|Rep: Ribosome recycling factor -
Marinobacter algicola DG893
Length = 194
Score = 57.6 bits (133), Expect = 2e-07
Identities = 34/122 (27%), Positives = 70/122 (57%)
Frame = +2
Query: 269 AVLSELIPVDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQI 448
AV+ + I D K + ++E++ F K + R+ +D++ V + G+E L+++A +
Sbjct: 9 AVIDD-IKADAEK-KMKKSLESLSWAFNKIRTGRAHPSILDSVTVDYYGQETPLKQVASV 66
Query: 449 VRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKN 628
++ +T+ ++ P ++P+ KAI S L LNP +G + +P+P +T+E R+ + K
Sbjct: 67 NVEDNRTLAVSPWEKP-LLPKIEKAIMMSDLGLNPSNNGEVIRIPMPMLTEETRKEMVKQ 125
Query: 629 AK 634
A+
Sbjct: 126 AR 127
>UniRef50_P0A808 Cluster: Ribosome recycling factor; n=59;
Gammaproteobacteria|Rep: Ribosome recycling factor -
Shigella flexneri
Length = 185
Score = 57.6 bits (133), Expect = 2e-07
Identities = 33/105 (31%), Positives = 56/105 (53%)
Frame = +2
Query: 311 RCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSS 490
R +E K +K + R++ +D I V++ G L++LA + ++ +T+ IN
Sbjct: 12 RMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFD 71
Query: 491 FPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAK 625
+ P KAI +S L LNP G+ + VP+P +T+E R+ L K
Sbjct: 72 -RSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTK 115
>UniRef50_Q7WJ91 Cluster: Ribosome recycling factor; n=60;
Bacteria|Rep: Ribosome recycling factor - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 186
Score = 57.6 bits (133), Expect = 2e-07
Identities = 35/108 (32%), Positives = 56/108 (51%)
Frame = +2
Query: 311 RCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSS 490
R + ++E +KA AK + R+ TG +D + V++ G + ++A + + +TI +
Sbjct: 13 RMAKSLETLKASLAKIRTGRAHTGILDHVQVEYYGSPVPISQVANVNLVDARTISVQPYE 72
Query: 491 FPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
P KAI S L LNP G T+ VP+P +T+E R L K K
Sbjct: 73 KSMAGPIE-KAIRESDLGLNPVSMGETIRVPMPALTEERRRDLTKVVK 119
>UniRef50_A6EM17 Cluster: Ribosome releasing factor; n=1;
unidentified eubacterium SCB49|Rep: Ribosome releasing
factor - unidentified eubacterium SCB49
Length = 192
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +2
Query: 293 VDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTI 472
+D K+ I ++K F + ++T + ++ V + G L ++A + P +
Sbjct: 17 IDSTKEAMDNTIVHLKKKFVNIRAGKATPSMVGSVMVNYYGSPTPLTQVANV--NTPDGM 74
Query: 473 VINFSSFPQ-VIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
I + + + +IPE K I + L NP +G ++ + VP +T+E R LAK AK
Sbjct: 75 TITIAPWEKGLIPEIEKGIHLANLGFNPMNNGESVIITVPPLTEERRRELAKQAK 129
>UniRef50_Q7XY97 Cluster: Ribosome recycling factor; n=2; cellular
organisms|Rep: Ribosome recycling factor - Griffithsia
japonica (Red alga)
Length = 230
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/120 (26%), Positives = 59/120 (49%)
Frame = +2
Query: 275 LSELIPVDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVR 454
L+E +K + R I+++K+ F + R++ +D I V + G + L LA +
Sbjct: 45 LTENDTAEKSEARMQKTIDSVKSAFNSVRTGRASPSLLDRIQVNYYGADTPLNSLATVSV 104
Query: 455 KNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
T+V+ I + +++ S + L P DG+T+ + +P++TKE R L K K
Sbjct: 105 SGTSTLVVEPYD-KSCISDIERSLMESDIGLTPNSDGSTIRLSIPQLTKERRSQLVKQVK 163
>UniRef50_Q8GRF5 Cluster: Ribosome recycling factor; n=34;
Gammaproteobacteria|Rep: Ribosome recycling factor -
Vibrio parahaemolyticus
Length = 185
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/107 (28%), Positives = 58/107 (54%)
Frame = +2
Query: 305 KDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINF 484
++R ++E +K + +K + R+ + I V++ G L ++A +V ++ +T+ I
Sbjct: 10 QERMDKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAATPLNQVANVVAEDARTLAITV 69
Query: 485 SSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAK 625
++ + KAI S L LNP GT + VP+P +T+E R+ L K
Sbjct: 70 FD-KELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVK 115
>UniRef50_Q98MB8 Cluster: Ribosome recycling factor; n=4;
Alphaproteobacteria|Rep: Ribosome recycling factor -
Rhizobium loti (Mesorhizobium loti)
Length = 184
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/110 (28%), Positives = 55/110 (50%)
Frame = +2
Query: 296 DKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIV 475
D +K R AI K D A + R+++ +D I V+ G + ++A + P+ I
Sbjct: 6 DDLKRRMDGAIAAFKHDLASLRTGRASSNLLDAIQVQAYGTTMPINQVANVTVPEPRMIS 65
Query: 476 INFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAK 625
++ ++ +AI S L NP DGT L +P+P++ ++ R+ L K
Sbjct: 66 VSIWD-KSMVGAVDRAIRESNLGFNPIVDGTNLRIPLPELNEQRRKELVK 114
>UniRef50_A0Q0R7 Cluster: Ribosome recycling factor; n=8;
Bacteria|Rep: Ribosome recycling factor - Clostridium
novyi (strain NT)
Length = 185
Score = 54.0 bits (124), Expect = 3e-06
Identities = 28/114 (24%), Positives = 59/114 (51%)
Frame = +2
Query: 293 VDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTI 472
++K +++ +I +K D + ++ +D + V++ G E + +LA + P+ +
Sbjct: 6 LNKSEEKMLKSISVLKKDLGSMKAGKANPAMLDRVNVEYYGSETPINQLANVSSPEPRVL 65
Query: 473 VINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
+I + + KAI S L LNP DG+ + + +P++T+E R+ + K K
Sbjct: 66 LIQPWD-KNSLKDIEKAILQSDLGLNPSNDGSVIRLIIPELTEETRKDIVKKVK 118
>UniRef50_Q3A398 Cluster: Ribosome recycling factor; n=4;
Bacteria|Rep: Ribosome recycling factor - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 185
Score = 52.8 bits (121), Expect = 7e-06
Identities = 28/111 (25%), Positives = 56/111 (50%)
Frame = +2
Query: 293 VDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTI 472
+ K + A+E++K D K + R++T +D + V + G L ++ + P+ I
Sbjct: 6 IKKARSGMDKAVESLKKDMTKVRTGRASTSLLDDVMVDYYGTPTPLNQVGTLAVPEPRLI 65
Query: 473 VINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAK 625
I +++ + +AI + L LNP DG + + +P +T+E R+ + K
Sbjct: 66 TIQPWE-KKLLADIERAIFKADLGLNPTSDGNLIRLVIPPMTEERRKEMGK 115
>UniRef50_A6DHK3 Cluster: Ribosome releasing factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Ribosome releasing
factor - Lentisphaera araneosa HTCC2155
Length = 188
Score = 52.8 bits (121), Expect = 7e-06
Identities = 27/114 (23%), Positives = 60/114 (52%)
Frame = +2
Query: 293 VDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTI 472
VD++ ++ AI + ++ + + ++T + I V G + L+E A I + +TI
Sbjct: 9 VDEITEKMDKAIAHFQSQIDAYSTGKATPALVQDIMVDAYGTKMRLKETAGISTPDARTI 68
Query: 473 VINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
I ++P+ KA+ + + + P DG + +P+P++T++ R+ + K+ K
Sbjct: 69 AIQPYD-ATILPDIEKALMMANIGITPMNDGQLIRLPIPELTEDRRKDMVKDLK 121
>UniRef50_A5GSA4 Cluster: Ribosome recycling factor; n=6; cellular
organisms|Rep: Ribosome recycling factor - Synechococcus
sp. (strain RCC307)
Length = 179
Score = 52.0 bits (119), Expect = 1e-05
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +2
Query: 302 MKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVIN 481
++D S ++E + +F + R+ T +D + V++ G + L+ LA I + +TI I
Sbjct: 3 LEDSMSKSLEATQRNFNTIRTGRANTSLLDKVMVEYYGADTPLKSLATISAPDSQTIQIQ 62
Query: 482 -FSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNA 631
F + E KAI S L L P DG + + +P +T+E R+ L K A
Sbjct: 63 PFDMGSMALIE--KAIGMSDLGLTPNNDGKLIRINIPPLTEERRKELCKIA 111
>UniRef50_Q831V2 Cluster: Ribosome recycling factor; n=19;
Bacteria|Rep: Ribosome recycling factor - Enterococcus
faecalis (Streptococcus faecalis)
Length = 185
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/111 (27%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = +2
Query: 305 KDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINF 484
K++ + A E+++ + + + R+ +D I V++ G + +LA I P+ V+
Sbjct: 10 KEKMTKAEESLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASI--NIPEARVLMI 67
Query: 485 SSFPQ-VIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
+ F + I + KAI S + ++P DG + + +P++T+E R+ LAK+ K
Sbjct: 68 TPFDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVK 118
>UniRef50_Q9PIR0 Cluster: Ribosome recycling factor; n=28;
Epsilonproteobacteria|Rep: Ribosome recycling factor -
Campylobacter jejuni
Length = 185
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/115 (26%), Positives = 58/115 (50%)
Frame = +2
Query: 296 DKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIV 475
+K K + ++E +K DF + + +D I V + G + L ++A ++ + TI
Sbjct: 7 NKQKTQSEKSLEALKKDFTTLRTGKVNIHILDHITVDYYGTQTPLNQVATVLASDASTIS 66
Query: 476 INFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAKVL 640
I P ++ AI+++ + +NP DG ++ + P +T+E RE K AK +
Sbjct: 67 ITPWEKP-LLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKAM 120
>UniRef50_Q014Z6 Cluster: COG0233: Ribosome recycling factor; n=2;
Ostreococcus|Rep: COG0233: Ribosome recycling factor -
Ostreococcus tauri
Length = 529
Score = 50.0 bits (114), Expect = 5e-05
Identities = 32/106 (30%), Positives = 50/106 (47%)
Frame = +2
Query: 323 AIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQV 502
A+ + D + + R++ G ID I V G L +A I N +T+ + P
Sbjct: 70 AVHALDVDLSHLRTARASEGMIDHIIVDVYGAPTPLSHVATITAPNAQTLSVTLFD-PST 128
Query: 503 IPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAKVL 640
P KAI +S L L P+ L VP+P +T++ R+ + K A L
Sbjct: 129 KPSVEKAIMNSPLGLVPRATSDGLIVPIPAMTQDTRKEVCKLAHKL 174
>UniRef50_Q2S6J3 Cluster: Ribosome recycling factor; n=1;
Salinibacter ruber DSM 13855|Rep: Ribosome recycling
factor - Salinibacter ruber (strain DSM 13855)
Length = 189
Score = 49.6 bits (113), Expect = 6e-05
Identities = 23/114 (20%), Positives = 57/114 (50%)
Frame = +2
Query: 293 VDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTI 472
+D+ + ++ M+++ + R++ ++ + V++ G + L+++A + P I
Sbjct: 10 LDEADEEMEESVSYMRSELRTIRAGRASPAMLENVTVEYYGSQTPLEQVASVSAPQPDLI 69
Query: 473 VINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
V+ I + I + L LNP DG + +P+P +++E R+ L + ++
Sbjct: 70 VVQPFD-RNAIENIERGIMKADLGLNPNNDGEKIRIPIPPLSEERRKELVETSR 122
>UniRef50_A4ECK2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 178
Score = 49.6 bits (113), Expect = 6e-05
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Frame = +2
Query: 323 AIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQV 502
++E++K +F+K + R+ + I V + G + ++A + K P+ ++ + +
Sbjct: 12 SLESLKHNFSKVRTGRANANILSDITVDYYGVPTPVTQVAAV--KTPEAHMLLIEPWDKA 69
Query: 503 IPEAL-KAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
+ A+ KAI +S L + P DGT + +P P T+E R L K +
Sbjct: 70 LINAIVKAIGASDLGITPNSDGTVVRLPFPAPTEERRRELVKECR 114
>UniRef50_Q7UTH0 Cluster: Ribosome recycling factor; n=4;
Planctomycetaceae|Rep: Ribosome recycling factor -
Rhodopirellula baltica
Length = 186
Score = 48.4 bits (110), Expect = 1e-04
Identities = 32/112 (28%), Positives = 56/112 (50%)
Frame = +2
Query: 305 KDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINF 484
++R A+ ++ + + + R+ G +D+I V+ G L++LA I P+ I+I
Sbjct: 11 EERMDKAVSVLQNNLSGIRTGRANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQILIRP 70
Query: 485 SSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAKVL 640
I + KAI + L LNPQ DG + + VP ++ E R+ + K L
Sbjct: 71 YD-ATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKEL 121
>UniRef50_Q88VJ7 Cluster: Ribosome recycling factor; n=94;
Bacteria|Rep: Ribosome recycling factor - Lactobacillus
plantarum
Length = 187
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/89 (26%), Positives = 48/89 (53%)
Frame = +2
Query: 368 RSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNL 547
R+ ++ I + G + L ++A I P+ +++ + E KAI +S L +
Sbjct: 33 RANASLLNRISADYYGAQTPLNQMAAITVPEPRVLMVTPFD-KSALKEIEKAILASDLGI 91
Query: 548 NPQQDGTTLFVPVPKVTKEHREALAKNAK 634
+P DG+ + + +P++T+E R+ LAK+ K
Sbjct: 92 SPANDGSAIRLVIPQLTEERRKELAKDVK 120
>UniRef50_Q9M1X0 Cluster: Ribosome recycling factor, chloroplast
precursor; n=16; cellular organisms|Rep: Ribosome
recycling factor, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 275
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +2
Query: 302 MKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVIN 481
+K + IE ++ F + RS +D I V++ G L+ +AQI + ++++
Sbjct: 99 VKSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLLQ 158
Query: 482 FSSFPQVIPEAL-KAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAK 625
+ + +A+ KAI +S L + P DG + + +P +T + R+ L+K
Sbjct: 159 --PYDKSSLKAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSDRRKELSK 205
>UniRef50_Q47S50 Cluster: Ribosome recycling factor; n=2;
Actinomycetales|Rep: Ribosome recycling factor -
Thermobifida fusca (strain YX)
Length = 185
Score = 47.6 bits (108), Expect = 3e-04
Identities = 29/110 (26%), Positives = 53/110 (48%)
Frame = +2
Query: 305 KDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINF 484
+++ A+ K DFA + R + + I V++ G + +LA P+ ++I+
Sbjct: 10 EEKMEKAVLVTKEDFASIRTGRPSPATFSRITVEYYGAMTPVNQLASFQVPEPRMVIISP 69
Query: 485 SSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
+P KAI S L +NP DG + V P++++E R+ K A+
Sbjct: 70 YD-KAAMPAIEKAIRESDLGVNPSNDGNIIRVVFPELSEERRKEYVKVAR 118
>UniRef50_Q1Q2J2 Cluster: Similar to ribosome recycling factor; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Similar to
ribosome recycling factor - Candidatus Kuenenia
stuttgartiensis
Length = 186
Score = 47.6 bits (108), Expect = 3e-04
Identities = 29/110 (26%), Positives = 56/110 (50%)
Frame = +2
Query: 305 KDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINF 484
K + I +++ D + R++TG ++ I V++ G L++LA I + ++I+I
Sbjct: 11 KAKMEKVIAHLQDDLKGIRTGRASTGLVENIRVEYYGNPSPLKQLAVISTPDAQSILIKP 70
Query: 485 SSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
++ KAI S + LNP + TL + +P + +E R+ L+ K
Sbjct: 71 YD-TTIVSNIEKAIIQSDIGLNPSVEAKTLRIVIPPLNEERRKKLSVTVK 119
>UniRef50_Q9X1B9 Cluster: Ribosome recycling factor; n=5;
Bacteria|Rep: Ribosome recycling factor - Thermotoga
maritima
Length = 185
Score = 47.6 bits (108), Expect = 3e-04
Identities = 31/114 (27%), Positives = 54/114 (47%)
Frame = +2
Query: 293 VDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTI 472
+ + K++ +E ++ + K + + + ++ I V + G + +LA I +T+
Sbjct: 6 IKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISISEERTL 65
Query: 473 VINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
VI V+ KAI++S L LNP DG + + P T E RE K AK
Sbjct: 66 VIKPWD-KSVLSLIEKAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAK 118
>UniRef50_A7H725 Cluster: Ribosome recycling factor precursor; n=3;
Proteobacteria|Rep: Ribosome recycling factor precursor
- Anaeromyxobacter sp. Fw109-5
Length = 187
Score = 47.2 bits (107), Expect = 3e-04
Identities = 26/103 (25%), Positives = 53/103 (51%)
Frame = +2
Query: 326 IENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQVI 505
+++++ + A + R++ +D + V + G L ++A + + I++ +I
Sbjct: 19 LDDLRRELASVRTGRASLHLLDGVRVDYYGTSTPLNQVATLSVPEARLIMVKPWE-KNLI 77
Query: 506 PEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
P KAI + L +NPQ D + VP+P +T+E R+ + K K
Sbjct: 78 PVIEKAIRDANLGVNPQSDKDLVRVPIPPLTEERRKEIVKQVK 120
>UniRef50_O66928 Cluster: Ribosome recycling factor; n=2; Aquifex
aeolicus|Rep: Ribosome recycling factor - Aquifex
aeolicus
Length = 184
Score = 46.4 bits (105), Expect = 6e-04
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Frame = +2
Query: 272 VLSELIPVDKMKDR-CSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQI 448
++ EL + K ++ A+E K + A + R++T ++ I V++ G + +++L I
Sbjct: 1 MIKELEDIFKEAEKDMKKAVEYYKNEIAGLRTSRASTALVEEIKVEYYGSKVPIKQLGTI 60
Query: 449 VRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAK 625
IVI +P KAI LNLNP G + V +P +T+E R L +
Sbjct: 61 SVPEHNQIVIQVWD-QNAVPAIEKAIREE-LNLNPTVQGNVIRVTLPPLTEERRRELVR 117
>UniRef50_Q4FM67 Cluster: Ribosome recycling factor; n=2; Candidatus
Pelagibacter ubique|Rep: Ribosome recycling factor -
Pelagibacter ubique
Length = 183
Score = 46.0 bits (104), Expect = 8e-04
Identities = 28/89 (31%), Positives = 43/89 (48%)
Frame = +2
Query: 368 RSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNL 547
R+ + +D + V G+ L +++ I + +TI I V P AI S L L
Sbjct: 29 RANSSMLDLVKVDVYGQAMPLNQVSSITTPDARTINIQVWDLNNV-PLVDTAIKKSELGL 87
Query: 548 NPQQDGTTLFVPVPKVTKEHREALAKNAK 634
NPQ DG + +PVP + +E R + K K
Sbjct: 88 NPQIDGQLIRLPVPDLNEERRTEIKKLIK 116
>UniRef50_Q1E595 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 291
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Frame = +2
Query: 413 GKEYE---LQELAQIVRKNPK--TIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTT-- 571
GKE E L ELAQ++ K + TI++ F + I AL+A+ S L+LNPQ D
Sbjct: 145 GKEKETVRLSELAQVIPKGGRMVTILVGEEEFIKPITSALQAVPS--LSLNPQPDPHNKL 202
Query: 572 -LFVPVPKVTKEHREALAKNAK 634
L +P+P T+E R+ K+AK
Sbjct: 203 QLNLPIPPPTRESRDQAVKDAK 224
>UniRef50_Q8EQV0 Cluster: Ribosome recycling factor; n=40;
Bacteria|Rep: Ribosome recycling factor - Oceanobacillus
iheyensis
Length = 185
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/109 (23%), Positives = 52/109 (47%)
Frame = +2
Query: 299 KMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVI 478
+M+ + A++ + + A + R+ +D++ V + G L +LA + + + I
Sbjct: 8 EMEQKMEQAVQALSKNLASVRAGRANPSILDSVFVDYYGASTPLNQLASVGAPEARLLTI 67
Query: 479 NFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAK 625
I + KAI + L L+P DG + + +P +T+E R+ L K
Sbjct: 68 TPYD-KSAIGDIEKAIQKADLGLSPSSDGNIIRINIPALTQERRKDLVK 115
>UniRef50_Q6U200 Cluster: Ribosome recycling factor; n=1;
Helicobacter mustelae|Rep: Ribosome recycling factor -
Helicobacter mustelae
Length = 139
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/85 (24%), Positives = 46/85 (54%)
Frame = +2
Query: 386 IDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQDG 565
+D + V + G L ++ ++ ++ TI+I ++ + +AI + + +NP DG
Sbjct: 3 LDNVKVDYYGTPTPLNQVGSVIAQDATTILITPWE-KNLLKDIERAIQEANIGVNPNNDG 61
Query: 566 TTLFVPVPKVTKEHREALAKNAKVL 640
T+ + P +T+E R+ +AK+ K +
Sbjct: 62 ETIKLFFPPMTQEQRKEIAKDTKAM 86
>UniRef50_A7CYY7 Cluster: Ribosome recycling factor; n=1;
Opitutaceae bacterium TAV2|Rep: Ribosome recycling
factor - Opitutaceae bacterium TAV2
Length = 181
Score = 44.4 bits (100), Expect = 0.002
Identities = 27/111 (24%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +2
Query: 311 RCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSS 490
R A+++ +FA + ++T ++ + + G + +++ A I+ + + IVI
Sbjct: 12 RMKKAVDHTLHEFANIHTGKATPAMVEGVMIDAYGSQMRIKDCAAIMTPDARMIVIQ--P 69
Query: 491 FPQVIPEAL-KAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAKVL 640
+ + + +A+ K I + L NP DG + VP+P++++E R K A L
Sbjct: 70 WDKGLVQAISKGIQIANLGFNPNVDGNLIRVPLPEMSRERRLEFVKVANRL 120
>UniRef50_Q8R5Z9 Cluster: Ribosome recycling factor; n=4;
Bacteria|Rep: Ribosome recycling factor - Fusobacterium
nucleatum subsp. nucleatum
Length = 190
Score = 44.4 bits (100), Expect = 0.002
Identities = 29/123 (23%), Positives = 61/123 (49%)
Frame = +2
Query: 266 MAVLSELIPVDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQ 445
M++ S+ + V + +++ IE +K F + R+ +D I V+ G E L ++
Sbjct: 1 MSIASDKL-VKECEEKMVKTIEAVKEKFTAIRAGRANVSMLDGIKVENYGSEVPLNQIGT 59
Query: 446 IVRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAK 625
+ + +VI+ +I + KAI ++ + + P DG + + +P++T + R+ K
Sbjct: 60 VSAPEARLLVIDPWD-KTLISKIEKAILAANIGMTPNNDGRVIRLVLPELTADRRKEYVK 118
Query: 626 NAK 634
AK
Sbjct: 119 LAK 121
>UniRef50_Q7VD62 Cluster: Ribosome recycling factor; n=30;
Cyanobacteria|Rep: Ribosome recycling factor -
Prochlorococcus marinus
Length = 182
Score = 44.0 bits (99), Expect = 0.003
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 323 AIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVIN-FSSFPQ 499
++E + +F + R+ T +D + V++ G + L+ LA I + +T+ I F
Sbjct: 13 SVEACQRNFNTIRTGRANTSLLDRLTVEYYGADTPLKSLATISTPDSQTLAIQPFDLGSL 72
Query: 500 VIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNA 631
+ E KAIS S L P DG + + +P +T+E R+ K A
Sbjct: 73 GLIE--KAISISDLGFTPNNDGKIIRINIPPLTEERRKQFCKLA 114
>UniRef50_O51147 Cluster: Ribosome recycling factor; n=3; Borrelia
burgdorferi group|Rep: Ribosome recycling factor -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 184
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/89 (24%), Positives = 48/89 (53%)
Frame = +2
Query: 368 RSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNL 547
R ++ D I +++ + + +++ I + +VI ++ + +AI +S L++
Sbjct: 30 RISSNIFDRICIQYHDRRTPITQVSSIRIPEARLVVIQPWD-KSILNKIEQAILNSDLSM 88
Query: 548 NPQQDGTTLFVPVPKVTKEHREALAKNAK 634
NP DG+ + + VP +T E R+ + K+AK
Sbjct: 89 NPSNDGSVIRIKVPNLTSERRQEIVKHAK 117
>UniRef50_O83613 Cluster: Ribosome recycling factor; n=2;
Bacteria|Rep: Ribosome recycling factor - Treponema
pallidum
Length = 183
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = +2
Query: 368 RSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNL 547
R+T +D I V + + L ++A + + I+I ++ + +AI S L+L
Sbjct: 29 RATAHLLDQITVDYYQQPTALSQVATVSVPEARLIIIQPWD-KTLLADIERAILKSKLSL 87
Query: 548 NPQQDGTTLFVPVPKVTKEHREALAKNAKVL 640
NP DG + + +P +T+E R+ L + A+ L
Sbjct: 88 NPSNDGKVIRLVIPPLTQERRKELVRQARAL 118
>UniRef50_P61308 Cluster: Ribosome recycling factor; n=3; Candidatus
Phytoplasma asteris|Rep: Ribosome recycling factor -
Onion yellows phytoplasma
Length = 184
Score = 43.2 bits (97), Expect = 0.006
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Frame = +2
Query: 302 MKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQI-VRKNPKTIVI 478
++ + + A E M +F + + +D I V + G L+ LA I V + + +
Sbjct: 12 LETKMTQAQEVMLKNFCDIRTGTANPNILDKITVNYYGAPTFLKTLASISVSEGNQLNIK 71
Query: 479 NFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAKVL 640
+ S +IP K + +S L + PQ DG + + PK T+E R+AL K + L
Sbjct: 72 PYDS--TLIPNIKKVLLASNLGITPQTDGLVVRLVFPKPTEERRKALMKEVEQL 123
>UniRef50_A5UUU9 Cluster: Ribosome recycling factor; n=4;
Bacteria|Rep: Ribosome recycling factor - Roseiflexus
sp. RS-1
Length = 185
Score = 42.7 bits (96), Expect = 0.007
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = +2
Query: 305 KDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVIN- 481
+ R A E ++ A + R++ ++ + V+ G L +LA I P+ +VI
Sbjct: 10 ESRMKKATEALRNHLATIRTGRASPALVEHLHVEAYGATLPLNQLATITVPEPRLLVIQP 69
Query: 482 FSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAK 625
F + + KAI +S L + P DG + + +P++T+ R+ L K
Sbjct: 70 FDA--NTVKAISKAIMNSELGITPTDDGRVIRLAIPQLTEARRKELTK 115
>UniRef50_P61302 Cluster: Ribosome recycling factor; n=36;
Bacteria|Rep: Ribosome recycling factor - Bdellovibrio
bacteriovorus
Length = 186
Score = 42.7 bits (96), Expect = 0.007
Identities = 27/103 (26%), Positives = 50/103 (48%)
Frame = +2
Query: 326 IENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQVI 505
+ ++ + K + R+ +D I V + G L ++A I + K+ +I ++
Sbjct: 18 LNSLSEELKKVRTGRAQVSMLDGIRVNYYGTPSPLSQVASISTPDAKSFLIAPWEVA-IL 76
Query: 506 PEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
+ +AI S L + P DG + + VP +T+E R+ LAK K
Sbjct: 77 KDIEQAIIKSELGMAPMNDGKVIRLKVPDLTEERRKDLAKQVK 119
>UniRef50_Q3ZZC4 Cluster: Ribosome recycling factor; n=3;
Dehalococcoides|Rep: Ribosome recycling factor -
Dehalococcoides sp. (strain CBDB1)
Length = 185
Score = 42.3 bits (95), Expect = 0.010
Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +2
Query: 293 VDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTI 472
+ K + + SA+++ + + + + RS+ ++ I V++ G + LA I +P+ I
Sbjct: 6 LQKSEKKMSASLDVLLQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLANISAPDPRYI 65
Query: 473 VINFSSFPQVIPEAL-KAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAK 625
I + + A+ KAI S L L P DG + + +P +++E R+ + K
Sbjct: 66 TIQ--PWDRSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIK 115
>UniRef50_Q6BLC3 Cluster: Ribosomal recycling factor, mitochondrial
precursor; n=2; Saccharomycetaceae|Rep: Ribosomal
recycling factor, mitochondrial precursor - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 257
Score = 42.3 bits (95), Expect = 0.010
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 4/123 (3%)
Frame = +2
Query: 287 IPVDKMKDRCSAAIENMKADFAKHLSIRSTTGSI-DTIPVKFEGKEYELQELAQIVRKNP 463
I D ++ IE A + T+ +I D + V+ E +AQ K
Sbjct: 69 IDFDDATNKFKGVIERFSKQ-ANEAKLGKTSPNIFDKLIVETANGEVGFTSVAQTTVKGR 127
Query: 464 KTIVINFSSFPQVIPEALKAISSSGLNLNPQQDGT---TLFVPVPKVTKEHREALAKNAK 634
++ F P + + A+ S LN+NPQ D + TL VP+P +T E ++ AK K
Sbjct: 128 NFMITVFD--PSNVKSIINAVLGSDLNMNPQIDPSNKQTLKVPLPPLTTESKKENAKQLK 185
Query: 635 VLY 643
++Y
Sbjct: 186 LVY 188
>UniRef50_Q55G90 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 263
Score = 41.1 bits (92), Expect = 0.022
Identities = 25/85 (29%), Positives = 43/85 (50%)
Frame = +2
Query: 386 IDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQDG 565
++ I V+ L +A I K+ T+ I ++ +A+++SGL LNPQ
Sbjct: 119 LERINVETPSGNLLLPHMAMITIKDSLTLNITLYD-SSLLSNVERALTNSGLGLNPQTFD 177
Query: 566 TTLFVPVPKVTKEHREALAKNAKVL 640
TT+ V +PK T++ R+ L K +
Sbjct: 178 TTIRVSLPKPTQDLRQKLIKQVNTI 202
>UniRef50_Q8D2G5 Cluster: Ribosome recycling factor; n=1;
Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis|Rep: Ribosome recycling factor -
Wigglesworthia glossinidia brevipalpis
Length = 185
Score = 39.9 bits (89), Expect = 0.052
Identities = 28/110 (25%), Positives = 50/110 (45%)
Frame = +2
Query: 296 DKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIV 475
+ R +I+ K + +K + R + I+ I + G L +L+ I+ + +
Sbjct: 7 ENSNSRMKKSIDFFKKNISKIRTNRVSPSLIENIYINCYGTSVPLSKLSNILSEKSNILK 66
Query: 476 INFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAK 625
IN +I + +AI SS L +NPQ + + PK+T+ R L K
Sbjct: 67 INVFD-NNIIKKIEQAILSSDLGVNPQIQENYIRIEFPKLTEARRFELIK 115
>UniRef50_Q2GCI7 Cluster: Ribosome recycling factor; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: Ribosome
recycling factor - Neorickettsia sennetsu (strain
Miyayama)
Length = 185
Score = 38.3 bits (85), Expect = 0.16
Identities = 28/113 (24%), Positives = 52/113 (46%)
Frame = +2
Query: 296 DKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIV 475
DK++ + ++K + LS+ +D + V + L ++A + N K +
Sbjct: 11 DKLRSSYEVFLSDLKGIRSGSLSV----SILDGVIVSTHMGKLRLNQVASLSVVNNKMLS 66
Query: 476 INFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
+ + AI +S L +NP +G+ L +PVP +T+E R+ L K K
Sbjct: 67 VQVWD-KSTVGAVKDAILTSNLGMNPIVEGSVLRLPVPDLTEERRKELVKVLK 118
>UniRef50_Q6CTR7 Cluster: Ribosomal recycling factor, mitochondrial
precursor; n=3; Saccharomycetales|Rep: Ribosomal
recycling factor, mitochondrial precursor -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 241
Score = 37.9 bits (84), Expect = 0.21
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +2
Query: 413 GKE-YELQELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQ---DGTTLFV 580
GKE + ELA K +++ P+ + AI ++GLNLNP++ + L V
Sbjct: 97 GKEGQKFTELAATSLKGRNALIVTVFD-PKDTKNIVSAIMAAGLNLNPERIPNNDQQLKV 155
Query: 581 PVPKVTKEHREALAKNAKVLY 643
+P +T E R+A+ K+ K ++
Sbjct: 156 SLPPITTETRQAVCKDLKKVF 176
>UniRef50_P75161 Cluster: Ribosome recycling factor; n=3;
Mycoplasma|Rep: Ribosome recycling factor - Mycoplasma
pneumoniae
Length = 184
Score = 37.5 bits (83), Expect = 0.28
Identities = 28/110 (25%), Positives = 44/110 (40%)
Frame = +2
Query: 305 KDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINF 484
K+ + +K + +K + R D + V+ G + LAQI P+ IVI
Sbjct: 11 KETADKKFQWLKEELSKIRTGRPNPKLFDNLLVESYGDRMPMVALAQIAVNPPREIVIKP 70
Query: 485 SSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
I I + L + P DG + + P +T+E R K AK
Sbjct: 71 FDVKNNINAIYSEIQRANLGVQPVIDGDKIRINFPPMTQESRLESIKQAK 120
>UniRef50_A7EK01 Cluster: Predicted protein; n=2;
Sclerotiniaceae|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 288
Score = 37.1 bits (82), Expect = 0.36
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Frame = +2
Query: 323 AIENMKADFAK-HLSIRSTTGSIDTIPVKF--EGKE-YELQELAQIVRKNPKTIVINFSS 490
++E +K D K R ++ + VK + KE + L +LAQ++ K +++V+
Sbjct: 111 SLEKLKNDLGKLRTGGRFNPEVLEGLRVKLGKDAKESFRLGDLAQVLPKGGRSVVVLVGE 170
Query: 491 FPQVIPEALKAISSSGLNLNP---QQDGTTLFVPVPKVTKEHREALAKNA 631
+ P SS L+L P Q+ L +P+P TKE R+A + A
Sbjct: 171 KDHIKPILSTIQSSPTLSLQPVPDPQNPHALNIPIPPPTKESRDAALQAA 220
>UniRef50_Q9Z7K6 Cluster: Ribosome recycling factor; n=7;
Chlamydiaceae|Rep: Ribosome recycling factor - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 180
Score = 37.1 bits (82), Expect = 0.36
Identities = 24/109 (22%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +2
Query: 311 RCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIVRKNPKTIVINFSS 490
+ +AA++ + + ++ ++T+ V G L ++A I + + +VI S
Sbjct: 10 KMAAALDFFHKEVKSFRTGKAHPALVETVVVDVYGTTMRLSDIASISVADLRQLVI--SP 67
Query: 491 FPQVIPEAL-KAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
+ A+ K I ++ LNL P+ +G+ + + VP+ T ++R+ + K +
Sbjct: 68 YDGNNASAIAKGIIAANLNLQPEVEGSIIRIKVPEPTADYRQEMIKQLR 116
>UniRef50_Q8RB62 Cluster: Pyruvate:ferredoxin oxidoreductase and
related 2-oxoacid:ferredoxin oxidoreductases, alpha
subunit; n=5; Clostridia|Rep: Pyruvate:ferredoxin
oxidoreductase and related 2-oxoacid:ferredoxin
oxidoreductases, alpha subunit - Thermoanaerobacter
tengcongensis
Length = 559
Score = 35.9 bits (79), Expect = 0.84
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +2
Query: 404 KFEGKEYELQELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVP 583
KFE + E+QE I ++NPK ++I + S I EA++ + GL++ G +F
Sbjct: 437 KFEYLKEEIQEPWFIGKENPKNLIIGWGSTYGAIKEAVENLVDEGLSV-----GALIFGD 491
Query: 584 VPKVTKEHREALAKNAK 634
+ + + L+KNAK
Sbjct: 492 IWPLPTQRLLELSKNAK 508
>UniRef50_A1THV8 Cluster: Putative uncharacterized protein; n=1;
Mycobacterium vanbaalenii PYR-1|Rep: Putative
uncharacterized protein - Mycobacterium vanbaalenii
(strain DSM 7251 / PYR-1)
Length = 878
Score = 34.3 bits (75), Expect = 2.6
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +2
Query: 389 DTIPVKFEGKEYELQELAQIVRKNPKTIV 475
D +PVKF G+E + Q+++QI+R+N ++
Sbjct: 34 DDLPVKFHGRERDAQKISQIIRENDVVVL 62
>UniRef50_UPI000049844A Cluster: hypothetical protein 24.t00040;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 24.t00040 - Entamoeba histolytica HM-1:IMSS
Length = 1053
Score = 33.9 bits (74), Expect = 3.4
Identities = 21/114 (18%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Frame = +2
Query: 296 DKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQELAQIV---RKNPK 466
+K+K + + ++ K + ++RS + ++++ KE +L+E+ QI+ +K K
Sbjct: 143 EKLKKKENELMDKEKKLLDQESNVRSREAEVMLCDIQYDKKEEKLKEIEQILDTKKKELK 202
Query: 467 TIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKN 628
+ + +++ E +K I + ++ ++ + V K+ E E + K+
Sbjct: 203 ELQLQIKEQQKILDERIKTIETKEQSVEGKKRQLEIDEKVLKIRMEEAEKVIKS 256
>UniRef50_A7CRE3 Cluster: ATP-dependent DNA helicase RecQ; n=1;
Opitutaceae bacterium TAV2|Rep: ATP-dependent DNA
helicase RecQ - Opitutaceae bacterium TAV2
Length = 611
Score = 33.9 bits (74), Expect = 3.4
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Frame = +2
Query: 266 MAVLSELIPVDKMKDRCSAAIENMKADFAKHLSIRST---TGSIDTIPVKFE--GKEYEL 430
+A + EL+P M + A E ++AD KHL++R S + + + K+ L
Sbjct: 156 LARMRELLPEAPMMALTATATERVRADIIKHLNLRDPAVFVASFNRANLSYRVLPKDEPL 215
Query: 431 QELAQIVRKNPKTIVINFSSFPQVIPEALKAISSSGLNLNPQQDGTT 571
+++ V+K I + + ++++S G + P G T
Sbjct: 216 KQIIDFVKKREDESGIVYCASRATAQRTAESLASRGYSARPYHAGLT 262
>UniRef50_A7TJC1 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 238
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 494 PQVIPEALKAISSSGLNLNPQQD---GTTLFVPVPKVTKEHREALAKNAKVLY 643
P+ + AI +GLNLNP++D L V +P T E R L K K+++
Sbjct: 122 PKDAKNVISAIMGAGLNLNPEKDPNNSQLLKVLLPPPTTESRMNLVKELKIVF 174
>UniRef50_UPI0000F20468 Cluster: PREDICTED: similar to G
PROTEIN-COUPLED RECEPTOR CKR-L3; n=2; Danio rerio|Rep:
PREDICTED: similar to G PROTEIN-COUPLED RECEPTOR CKR-L3
- Danio rerio
Length = 348
Score = 32.7 bits (71), Expect = 7.8
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = -1
Query: 192 YVVFKLWAQTIFSHNLSCRLGVTLFINVDTISLCSILVPILQITLTIMLRLY*NIFC 22
++ F L T+ H + +T+F ++T L IL+P +Q+ ++ L +FC
Sbjct: 149 FLAFVLSLPTVIYHQEKNQECITIFSEMETARLVKILIPSMQMVFGFLVPLMVMVFC 205
>UniRef50_UPI000065FD2A Cluster: Novel protein similar to
mitochondrial ribosome recycling factor isoform 1
(LOC286423).; n=1; Takifugu rubripes|Rep: Novel protein
similar to mitochondrial ribosome recycling factor
isoform 1 (LOC286423). - Takifugu rubripes
Length = 180
Score = 32.7 bits (71), Expect = 7.8
Identities = 12/44 (27%), Positives = 28/44 (63%)
Frame = +2
Query: 254 VEINMAVLSELIPVDKMKDRCSAAIENMKADFAKHLSIRSTTGS 385
+ IN A++ +++ + ++ +A + +K DF + LSIR++ G+
Sbjct: 17 LNINAALVEDIVDLGALRAEMAAVVSALKDDFTRSLSIRTSLGN 60
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,213,740
Number of Sequences: 1657284
Number of extensions: 9674755
Number of successful extensions: 23252
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 22719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23247
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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