Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_N14
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80442-2|AAB37664.2|  238|Caenorhabditis elegans Hypothetical pr...    75   3e-14
U56864-1|AAB04059.1|  355|Caenorhabditis elegans EGL-30 protein.       31   0.94 
AY008139-1|AAG32092.1|  355|Caenorhabditis elegans heterotrimeri...    31   0.94 
AF003739-2|AAM15593.1|  303|Caenorhabditis elegans Egg laying de...    31   0.94 
AF003739-1|AAB58071.1|  355|Caenorhabditis elegans Egg laying de...    31   0.94 
Z70035-10|CAA93871.2|  473|Caenorhabditis elegans Hypothetical p...    29   2.9  
AF188748-1|AAF00545.1|  198|Caenorhabditis elegans putative tyro...    29   3.8  

>U80442-2|AAB37664.2|  238|Caenorhabditis elegans Hypothetical
           protein T20F5.3 protein.
          Length = 238

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
 Frame = +2

Query: 344 DFAKHLSIRSTTGSIDTIPVKFE-GKEYELQELAQIVRKNPKTIVINFSSFPQVIPEALK 520
           +  +H S++      + + VK E GK+  L  +A++  K+P  I+INF   P  I  A  
Sbjct: 74  ELTRHFSLKVDIRQYEDVMVKLENGKDKPLSMIARVTLKSPLMIMINFQDNPSAIKAAKL 133

Query: 521 AISSSGLNLNPQQDGTTLFVPVPKVTKEHREALAKNAK 634
           AI  S LN+ PQQ+G  L+V VP ++KE RE +A +AK
Sbjct: 134 AIQKSTLNVTPQQEGAVLYVNVPPMSKERREKMASDAK 171


>U56864-1|AAB04059.1|  355|Caenorhabditis elegans EGL-30 protein.
          Length = 355

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +2

Query: 359 LSIRSTTGSIDTIPVKFEGKEYELQELAQIVRK 457
           ++I+S   ++DT+ +KF  +  ELQE A +VR+
Sbjct: 79  MAIQSMIRAMDTLDIKFGNESEELQEKAAVVRE 111


>AY008139-1|AAG32092.1|  355|Caenorhabditis elegans heterotrimeric G
           protein alphasubunit protein.
          Length = 355

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +2

Query: 359 LSIRSTTGSIDTIPVKFEGKEYELQELAQIVRK 457
           ++I+S   ++DT+ +KF  +  ELQE A +VR+
Sbjct: 79  MAIQSMIRAMDTLDIKFGNESEELQEKAAVVRE 111


>AF003739-2|AAM15593.1|  303|Caenorhabditis elegans Egg laying
           defective protein 30,isoform b protein.
          Length = 303

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +2

Query: 359 LSIRSTTGSIDTIPVKFEGKEYELQELAQIVRK 457
           ++I+S   ++DT+ +KF  +  ELQE A +VR+
Sbjct: 27  MAIQSMIRAMDTLDIKFGNESEELQEKAAVVRE 59


>AF003739-1|AAB58071.1|  355|Caenorhabditis elegans Egg laying
           defective protein 30,isoform a protein.
          Length = 355

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +2

Query: 359 LSIRSTTGSIDTIPVKFEGKEYELQELAQIVRK 457
           ++I+S   ++DT+ +KF  +  ELQE A +VR+
Sbjct: 79  MAIQSMIRAMDTLDIKFGNESEELQEKAAVVRE 111


>Z70035-10|CAA93871.2|  473|Caenorhabditis elegans Hypothetical
           protein R09D1.12 protein.
          Length = 473

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 19/80 (23%), Positives = 38/80 (47%)
 Frame = +2

Query: 254 VEINMAVLSELIPVDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEYELQ 433
           V++N+AV   + P D+ +D+       +     KH ++ +  G+I T   K  G+EY  Q
Sbjct: 190 VQVNVAVKKMVDPTDEKQDKLIYDEIKLMCAIGKHPNVLAIVGAI-TKKEKVSGREYN-Q 247

Query: 434 ELAQIVRKNPKTIVINFSSF 493
            +++ +       V+  S +
Sbjct: 248 AVSEFIEGGDLRSVLRNSPY 267


>AF188748-1|AAF00545.1|  198|Caenorhabditis elegans putative
           tyrosine kinase receptorR09D1.12 protein.
          Length = 198

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = +2

Query: 254 VEINMAVLSELIPVDKMKDRCSAAIENMKADFAKHLSIRSTTGSIDTIPVKFEGKEY 424
           V++N+AV   + P D+ +D+       +     KH ++ +  G+I T   K  G+EY
Sbjct: 133 VQVNVAVKKMVDPTDEKQDKLIYDEIKLMCAIGKHPNVLAIVGAI-TKKEKVSGREY 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,409,921
Number of Sequences: 27780
Number of extensions: 244814
Number of successful extensions: 612
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)