Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_N12
         (654 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7KTT0 Cluster: CG2179-PA, isoform A; n=5; Sophophora|R...    35   1.5  
UniRef50_Q55E99 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_Q7KTT0 Cluster: CG2179-PA, isoform A; n=5; Sophophora|Rep:
           CG2179-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 783

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +3

Query: 429 QQNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKV 554
           +Q    + K  AEK RE  +R+KEK+MKKI +   V  ++K+
Sbjct: 307 RQKQEELKKAEAEKQREREERRKEKHMKKIQERGQVEISQKI 348


>UniRef50_Q55E99 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 291

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
 Frame = -1

Query: 627 HYYVAHLMFGGVHEIPVHV-PLNFLRLYEHLRHSEILLFFS-YFSPFASADIHGTFRHSF 454
           HY + HL+F  VH I + +   +  + +     S+  +++S YF P     IH  +    
Sbjct: 140 HYAMGHLVFSFVHYINIWIFYYSNTKQFPSFNSSDPFIYYSFYFLPVILQSIHANYHRDI 199

Query: 453 SAYFQSFVETVQMLI-KRFQV 394
               +S + T+ +L+ K+F +
Sbjct: 200 ENDKKSGILTIAILLGKKFSL 220


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,625,941
Number of Sequences: 1657284
Number of extensions: 9779239
Number of successful extensions: 22789
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22780
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)