Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_N12
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82835-1|CAA58042.1| 1977|Homo sapiens sodium channel alpha subu... 38 0.024
DQ857292-1|ABI51981.1| 1977|Homo sapiens voltage-gated sodium ch... 38 0.024
AY682085-1|AAT85834.1| 539|Homo sapiens voltage-gated sodium ch... 38 0.024
AY682084-1|AAT85833.1| 528|Homo sapiens voltage-gated sodium ch... 38 0.024
AC108146-1|AAY14794.1| 1146|Homo sapiens unknown protein. 38 0.024
AY682086-1|AAT85835.1| 539|Homo sapiens voltage-gated sodium ch... 38 0.041
DQ363528-1|ABC88011.1| 1083|Homo sapiens low-voltage-activated c... 31 2.7
AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated c... 31 2.7
AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated c... 31 2.7
AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel ... 31 2.7
AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-typ... 31 2.7
BC014476-1|AAH14476.1| 366|Homo sapiens G kinase anchoring prot... 30 6.3
AL662787-2|CAH70734.1| 366|Homo sapiens G kinase anchoring prot... 30 6.3
AL662787-1|CAH70735.1| 315|Homo sapiens G kinase anchoring prot... 30 6.3
AL354733-2|CAI16011.1| 366|Homo sapiens G kinase anchoring prot... 30 6.3
AL354733-1|CAI16010.1| 315|Homo sapiens G kinase anchoring prot... 30 6.3
AB033132-1|BAB40455.1| 315|Homo sapiens protein ( Homo sapiens ... 30 6.3
AB033131-1|BAB40454.1| 366|Homo sapiens protein ( Homo sapiens ... 30 6.3
>X82835-1|CAA58042.1| 1977|Homo sapiens sodium channel alpha subunit
protein.
Length = 1977
Score = 38.3 bits (85), Expect = 0.024
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 432 QNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKVAKSSTE 572
++S K +++ +E R R+K+KN KK++ DA K++KS +E
Sbjct: 460 ESSSETSKLSSKSAKERRNRRKKKNQKKLSSGEEKGDAEKLSKSESE 506
>DQ857292-1|ABI51981.1| 1977|Homo sapiens voltage-gated sodium
channel Nav1.7 protein.
Length = 1977
Score = 38.3 bits (85), Expect = 0.024
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 432 QNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKVAKSSTE 572
++S K +++ +E R R+K+KN KK++ DA K++KS +E
Sbjct: 460 ESSSETSKLSSKSAKERRNRRKKKNQKKLSSGEEKGDAEKLSKSESE 506
>AY682085-1|AAT85834.1| 539|Homo sapiens voltage-gated sodium
channel Nav1.7 protein.
Length = 539
Score = 38.3 bits (85), Expect = 0.024
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 432 QNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKVAKSSTE 572
++S K +++ +E R R+K+KN KK++ DA K++KS +E
Sbjct: 325 ESSSETSKLSSKSAKERRNRRKKKNQKKLSSGEEKGDAEKLSKSESE 371
>AY682084-1|AAT85833.1| 528|Homo sapiens voltage-gated sodium
channel Nav1.7 protein.
Length = 528
Score = 38.3 bits (85), Expect = 0.024
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 432 QNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKVAKSSTE 572
++S K +++ +E R R+K+KN KK++ DA K++KS +E
Sbjct: 325 ESSSETSKLSSKSAKERRNRRKKKNQKKLSSGEEKGDAEKLSKSESE 371
>AC108146-1|AAY14794.1| 1146|Homo sapiens unknown protein.
Length = 1146
Score = 38.3 bits (85), Expect = 0.024
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 432 QNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKVAKSSTE 572
++S K +++ +E R R+K+KN KK++ DA K++KS +E
Sbjct: 460 ESSSETSKLSSKSAKERRNRRKKKNQKKLSSGEEKGDAEKLSKSESE 506
>AY682086-1|AAT85835.1| 539|Homo sapiens voltage-gated sodium
channel Nav1.7 protein.
Length = 539
Score = 37.5 bits (83), Expect = 0.041
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 432 QNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKVAKSSTE 572
++S K +++ +E R R+K+KN KK++ DA K+ KS +E
Sbjct: 325 ESSSETSKLSSKSAKERRNRRKKKNQKKLSSGEEKGDAEKLPKSESE 371
>DQ363528-1|ABC88011.1| 1083|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 544
protein.
Length = 1083
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -2
Query: 320 KCHENQRSGSLQSYIIRLLFKSYNHNFVKKPSTKHQRRQFLTDLIFTMFSLHSILTLDCS 141
KC ++Q + + + L + PS + QRR + D T S+HS+ T
Sbjct: 301 KCRQHQEAEEARRREEKRLRRLERRRRSTFPSPEAQRRPYYADYSPTRRSIHSLCTSHYL 360
Query: 140 KLHVTFII 117
L +TFII
Sbjct: 361 DLFITFII 368
>AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated
calcium channel alpha13.2 subunit delta25B splice
variant protein.
Length = 1536
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -2
Query: 320 KCHENQRSGSLQSYIIRLLFKSYNHNFVKKPSTKHQRRQFLTDLIFTMFSLHSILTLDCS 141
KC ++Q + + + L + PS + QRR + D T S+HS+ T
Sbjct: 743 KCRQHQEAEEARRREEKRLRRLERRRRSTFPSPEAQRRPYYADYSPTRRSIHSLCTSHYL 802
Query: 140 KLHVTFII 117
L +TFII
Sbjct: 803 DLFITFII 810
>AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated
calcium channel alpha 1H protein.
Length = 2353
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -2
Query: 320 KCHENQRSGSLQSYIIRLLFKSYNHNFVKKPSTKHQRRQFLTDLIFTMFSLHSILTLDCS 141
KC ++Q + + + L + PS + QRR + D T S+HS+ T
Sbjct: 1560 KCRQHQEAEEARRREEKRLRRLERRRRSTFPSPEAQRRPYYADYSPTRRSIHSLCTSHYL 1619
Query: 140 KLHVTFII 117
L +TFII
Sbjct: 1620 DLFITFII 1627
>AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel alpha
1H subunit protein.
Length = 2353
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -2
Query: 320 KCHENQRSGSLQSYIIRLLFKSYNHNFVKKPSTKHQRRQFLTDLIFTMFSLHSILTLDCS 141
KC ++Q + + + L + PS + QRR + D T S+HS+ T
Sbjct: 1560 KCRQHQEAEEARRREEKRLRRLERRRRSTFPSPEAQRRPYYADYSPTRRSIHSLCTSHYL 1619
Query: 140 KLHVTFII 117
L +TFII
Sbjct: 1620 DLFITFII 1627
>AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-type
calcium channel alpha-1H subunit protein.
Length = 2373
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -2
Query: 320 KCHENQRSGSLQSYIIRLLFKSYNHNFVKKPSTKHQRRQFLTDLIFTMFSLHSILTLDCS 141
KC ++Q + + + L + PS + QRR + D T S+HS+ T
Sbjct: 1580 KCRQHQEAEEARRREEKRLRRLERRRRSTFPSPEAQRRPYYADYSPTRRSIHSLCTSHYL 1639
Query: 140 KLHVTFII 117
L +TFII
Sbjct: 1640 DLFITFII 1647
>BC014476-1|AAH14476.1| 366|Homo sapiens G kinase anchoring protein
1 protein.
Length = 366
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 432 QNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKVAKSS 566
Q GS TN EK RE R+++KE+ + + RN+A + KSS
Sbjct: 43 QTLGSKSTTN-EKKREKRRKKKEQQQSEANELRNLAFKKIPQKSS 86
>AL662787-2|CAH70734.1| 366|Homo sapiens G kinase anchoring protein
1 protein.
Length = 366
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 432 QNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKVAKSS 566
Q GS TN EK RE R+++KE+ + + RN+A + KSS
Sbjct: 43 QTLGSKSTTN-EKKREKRRKKKEQQQSEANELRNLAFKKIPQKSS 86
>AL662787-1|CAH70735.1| 315|Homo sapiens G kinase anchoring protein
1 protein.
Length = 315
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 432 QNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKVAKSS 566
Q GS TN EK RE R+++KE+ + + RN+A + KSS
Sbjct: 43 QTLGSKSTTN-EKKREKRRKKKEQQQSEANELRNLAFKKIPQKSS 86
>AL354733-2|CAI16011.1| 366|Homo sapiens G kinase anchoring protein
1 protein.
Length = 366
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 432 QNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKVAKSS 566
Q GS TN EK RE R+++KE+ + + RN+A + KSS
Sbjct: 43 QTLGSKSTTN-EKKREKRRKKKEQQQSEANELRNLAFKKIPQKSS 86
>AL354733-1|CAI16010.1| 315|Homo sapiens G kinase anchoring protein
1 protein.
Length = 315
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 432 QNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKVAKSS 566
Q GS TN EK RE R+++KE+ + + RN+A + KSS
Sbjct: 43 QTLGSKSTTN-EKKREKRRKKKEQQQSEANELRNLAFKKIPQKSS 86
>AB033132-1|BAB40455.1| 315|Homo sapiens protein ( Homo sapiens
mRNA, complete cds, testis-specific gene2. ).
Length = 315
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 432 QNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKVAKSS 566
Q GS TN EK RE R+++KE+ + + RN+A + KSS
Sbjct: 43 QTLGSKSTTN-EKKREKRRKKKEQQQSEANELRNLAFKKIPQKSS 86
>AB033131-1|BAB40454.1| 366|Homo sapiens protein ( Homo sapiens
mRNA, complete cds, testis-specific gene. ).
Length = 366
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 432 QNSGSMPKTNAEKCREYRQRQKEKNMKKIAKFRNVADARKVAKSS 566
Q GS TN EK RE R+++KE+ + + RN+A + KSS
Sbjct: 43 QTLGSKSTTN-EKKREKRRKKKEQQQSEANELRNLAFKKIPQKSS 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,916,442
Number of Sequences: 237096
Number of extensions: 1397773
Number of successful extensions: 2681
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2681
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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