Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_N11
         (652 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D563B0 Cluster: PREDICTED: similar to CG4088-PA,...    36   1.1  
UniRef50_Q17D50 Cluster: Origin recognition complex subunit; n=2...    33   4.5  
UniRef50_Q6LFB4 Cluster: Putative uncharacterized protein; n=2; ...    33   7.8  

>UniRef50_UPI0000D563B0 Cluster: PREDICTED: similar to CG4088-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG4088-PA, isoform A - Tribolium castaneum
          Length = 685

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +1

Query: 505 MESTVSVSKGVFLFPNGFQXXXXXXXXXXXXXFCKLFQEECWYLTYR 645
           M +TVSVSKGVF+F NG +                L+ +  WY TY+
Sbjct: 1   MAATVSVSKGVFVFKNGAKAASKKSRTKDKRT-QSLYCDSLWYKTYK 46


>UniRef50_Q17D50 Cluster: Origin recognition complex subunit; n=2;
           Culicidae|Rep: Origin recognition complex subunit -
           Aedes aegypti (Yellowfever mosquito)
          Length = 699

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +1

Query: 505 MESTVSVSKGVFLFPNGFQXXXXXXXXXXXXXF-CKLFQEECWYLTYRK 648
           M+ST+SVSKGVF+F NG                  +   +  WY +YRK
Sbjct: 1   MDSTISVSKGVFVFKNGATKAKTRRQPQKCRSIPNRAITDTVWYGSYRK 49


>UniRef50_Q6LFB4 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 2528

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -2

Query: 438 KKQCLTWFNLFFFKRFYDLVTKTFKSCLILIYNLIL 331
           KK+ +  +  FFF  FY L+    KSC+++ Y+++L
Sbjct: 449 KKEDIEEYFFFFFFLFYFLLLNNNKSCIVIYYDILL 484


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,263,768
Number of Sequences: 1657284
Number of extensions: 10734047
Number of successful extensions: 22440
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22425
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)