Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_N05
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A10.12c |ura3||dihydroorotate dehydrogenase Ura3|Schizosac... 136 4e-37
SPAC1F8.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.8
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 27 1.8
SPBC16E9.05 |erg6||delta-sterol C-methyltransferase |Schizosacch... 27 2.4
SPBC3D6.08c |||mRNA decapping complex subunit |Schizosaccharomyc... 26 4.1
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 26 5.5
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 25 7.2
SPBC3B8.02 |php5||CCAAT-binding factor complex subunit Php5|Schi... 25 7.2
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 25 7.2
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 9.5
>SPAC57A10.12c |ura3||dihydroorotate dehydrogenase
Ura3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 443
Score = 136 bits (328), Expect(2) = 4e-37
Identities = 59/114 (51%), Positives = 78/114 (68%)
Frame = +3
Query: 204 YLSPEVAHRIGVAAIKHGLFPPDQNEDPKILKTRLLDYDLSNPLGIAAGFDKHGDAVVGL 383
+ +PE +HR+ + A G+ P D+ D L + NP+G+AAGFDK DA+ GL
Sbjct: 75 FTTPEFSHRVAILAASWGITPKDRVADDPSLAVEVWGKKFCNPIGLAAGFDKQADAISGL 134
Query: 384 MKLGFSIIEVGSVTPQPQPGNPKPRVFRLPEDGAVINRYGFNSIGHDEVYKKLE 545
+ GFS +E+GSVTP+PQPGNPKPR FRL D +VINRYGFNSIGHD + K++
Sbjct: 135 LNFGFSYLEIGSVTPKPQPGNPKPRYFRLKPDLSVINRYGFNSIGHDAILAKIQ 188
Score = 34.3 bits (75), Expect(2) = 4e-37
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 546 GIEKAVMNRALLGVNLGKNKLSDDAGKDYVSGIEKF 653
G+ ++++ LG+NLGKNK ++ +DYV G+ F
Sbjct: 220 GVPRSLIPNKFLGINLGKNKNGNEI-EDYVEGVRTF 254
>SPAC1F8.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 226
Score = 27.5 bits (58), Expect = 1.8
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -2
Query: 97 LIFFKGSFFCDIVVVNKTN 41
++ F GSF+CD ++++TN
Sbjct: 63 IVRFNGSFYCDTTILSETN 81
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 156 KDFNSYYENVLQPLSQYLSPEVAHRIG-VAAIKHGLFPPDQNEDPKILKT 302
KD N YY+N + L Q HR V +++ L PP + + LK+
Sbjct: 341 KDNNDYYDNAARILKQMFHVAERHRRNRVPSVQEVLNPPPRESEAWRLKS 390
>SPBC16E9.05 |erg6||delta-sterol C-methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 282 DPKILKTRLLDYDLSNPLGIAAGFDKHGDAVVGLMKLGFSIIEVGSVTPQPQPGNP 449
D I K R + Y++ GI K DAV + K+GF+++E +T P P
Sbjct: 237 DSSIPKHREIAYNIEVGDGIPQMVRKC-DAVEAIKKVGFNLLEEDDLTDHDNPDLP 291
>SPBC3D6.08c |||mRNA decapping complex subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 140
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 560 GLLDSFQLFVYFVVPYAVEAISVDD 486
G+L SF F ++ Y +E I VDD
Sbjct: 36 GILRSFDQFANLMLQYTIERIYVDD 60
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 25.8 bits (54), Expect = 5.5
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -2
Query: 580 RSARFITAFSIPSSFLYTSSCPMLLKPYLLMTAPSSGSRKTLGLG 446
+S+R+ T S+PSS Y +CP L+ T+ + SR+ GLG
Sbjct: 155 QSSRY-TLPSLPSSPSY--NCPTTLRKIHTNTSSNGTSRRVSGLG 196
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 351 FDKHGDAVVGLMKLGFSIIEVGSVTPQPQPGNPKPRVFRLPEDGAVINRY 500
FD + D + G +++VG +TP P N K + E+GA I +
Sbjct: 835 FDNNKDIIFYCAARGH-MVDVGGITPGSMPSNSK----AIYEEGAAIKTF 879
>SPBC3B8.02 |php5||CCAAT-binding factor complex subunit
Php5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 415
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/64 (20%), Positives = 30/64 (46%)
Frame = +3
Query: 432 PQPGNPKPRVFRLPEDGAVINRYGFNSIGHDEVYKKLEGIEKAVMNRALLGVNLGKNKLS 611
P G P P +LP ++ H ++++ I++++ + LG + ++S
Sbjct: 226 PNQGFPMPTGSQLPFSNQQSSQPSMQYSSHPSRMQQMQDIDQSMYKQQRLGSEYPQLQMS 285
Query: 612 DDAG 623
D++G
Sbjct: 286 DNSG 289
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +3
Query: 159 DFNSYYENVLQPLSQYLSPEVAHRIGVAAIKHGLFPPDQNE 281
DFN N +Q L P++ + + ++ H + +NE
Sbjct: 244 DFNMLCSNSVQSAHTNLQPDITSFVAILSLSHEAYHCTENE 284
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 412 TSMIEKPSFIRPTTASPCLSNPAAMPSGLLRS 317
TSMI S TT SP + + +PS ++ S
Sbjct: 205 TSMIPSSSSFTTTTGSPYYNTSSFLPSSVISS 236
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,534,787
Number of Sequences: 5004
Number of extensions: 50815
Number of successful extensions: 150
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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