Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_N05
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1577 + 34554819-34554995,34555672-34555754,34555906-345562... 146 1e-35
05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225 31 0.80
01_06_1835 + 40223645-40224148,40224893-40225189,40225344-402254... 31 1.1
01_01_1225 - 9894899-9895333 31 1.1
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 30 1.4
02_01_0302 - 2021221-2023305 30 1.9
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 29 3.2
02_01_0043 + 300122-300907,301447-301722,302347-302481 29 4.3
09_02_0598 + 11087225-11087455 28 7.5
07_03_1544 - 27585581-27585757,27585986-27586091,27586246-275863... 28 7.5
06_03_0875 - 25584789-25585307,25585424-25585570,25585734-255858... 28 7.5
04_04_0205 + 23591720-23591848,23592640-23592740,23592829-23593222 28 7.5
04_01_0615 - 8060085-8060972 28 7.5
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 28 7.5
02_02_0413 - 9960271-9960954 28 7.5
02_02_0408 + 9901892-9902004,9903777-9903862,9905019-9905129,990... 28 7.5
05_04_0049 + 17497255-17497908 27 9.9
>04_04_1577 +
34554819-34554995,34555672-34555754,34555906-34556229,
34556347-34556602,34556951-34557031,34557106-34557213,
34557300-34557329,34557475-34557612,34557737-34557774,
34557858-34557957,34558194-34558268
Length = 469
Score = 146 bits (355), Expect = 1e-35
Identities = 81/175 (46%), Positives = 102/175 (58%), Gaps = 21/175 (12%)
Frame = +3
Query: 183 VLQPLSQYLSPEVAHRIGVAAIKHGLFPPDQNEDPKILKTRLLDYDLSNPLGIAAGFDKH 362
++ PL L E AHR+ V A HG P ++ DP +L + +NP+G+AAGFDK+
Sbjct: 96 LVNPLFALLDAEFAHRLAVTAASHGFVPREKRPDPSVLGLEIWGRKFTNPIGLAAGFDKN 155
Query: 363 GDAVVGLMKLGFSIIEVGSVTPQPQPGNPKPRVFRLPEDGAVINRYGFNSIGHDEVYKKL 542
+AV GL+ +GF +EVGSVTP PQ GNPKPR+FRL E GAVINR GFNS G V K+L
Sbjct: 156 AEAVEGLLGMGFGFVEVGSVTPLPQEGNPKPRIFRLREHGAVINRCGFNSEGIVVVAKRL 215
Query: 543 ---EGIEK------------------AVMNRALLGVNLGKNKLSDDAGKDYVSGI 644
G K +LGVNLGKNK+S+DA DYV G+
Sbjct: 216 GAQHGKRKMEETSSSTSPTTSDVKQGGKAGPGILGVNLGKNKISEDATADYVQGV 270
>05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225
Length = 554
Score = 31.1 bits (67), Expect = 0.80
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = -1
Query: 377 HDRVSVLVEPGGYAKWIA*VV 315
+DRV ++PGGYA+W++ +V
Sbjct: 126 YDRVKEKIDPGGYAEWVSSIV 146
>01_06_1835 +
40223645-40224148,40224893-40225189,40225344-40225439,
40225595-40225748,40225773-40226011
Length = 429
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 565 ITAFSIPSSFLYTSSCPMLLKPYLLMTAPSSGSR 464
+ F++P++FLY +S P P LL+ G+R
Sbjct: 18 LLVFAVPTTFLYLTSAPAASSPSLLLNLKPFGAR 51
>01_01_1225 - 9894899-9895333
Length = 144
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 633 HNPSLHHRRAYSFPDSRRGVPDSLRPSRFLPA 538
H HRR+ S PD++R D+ RFLPA
Sbjct: 59 HRRHRRHRRSPSPPDAKRSTADATVAPRFLPA 90
>02_05_0449 -
29107310-29107377,29107732-29107777,29107860-29107934,
29108053-29108122,29108313-29108408,29108728-29108914,
29109001-29109169,29109614-29109646,29109731-29109841,
29110070-29111256,29112380-29112448,29114417-29114975,
29115455-29115589,29115714-29115896
Length = 995
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 494 QIW-LQQHRARRSIQKAGRNREGRNESGTPRRESGKE 601
Q+W L++H S + +G NR RN+S T + +SG E
Sbjct: 303 QLWMLEEHYTALSERSSGHNRHSRNDSST-KHKSGYE 338
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -2
Query: 487 TAPSSGSRKTLGLGF--PGCGCGVTEPTSMIEKPSFIRPTTASPCLSNPAAMPS 332
T PSSGS + G+ P G + PT + P PTT P S+P+ PS
Sbjct: 578 TPPSSGSPPSPSSGYQPPSGQPGASPPTQHV--PGAGTPTTTPPSHSHPSTPPS 629
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/95 (25%), Positives = 42/95 (44%)
Frame = -2
Query: 622 PASSESLFFPRFTPRSARFITAFSIPSSFLYTSSCPMLLKPYLLMTAPSSGSRKTLGLGF 443
PASS + PR P + +++ + Y ++ + P L+M + S K L F
Sbjct: 419 PASSLPEWPPRLQPEPSPMLSS-GLGLGLPYDATGGPVSLPELMMGQSTLFSAKPATLDF 477
Query: 442 PGCGCGVTEPTSMIEKPSFIRPTTASPCLSNPAAM 338
G G T ++ P+FI+P + L+ A +
Sbjct: 478 LGLGVSPTGASTSRGFPTFIQPIGGAVSLAGSATV 512
>02_01_0043 + 300122-300907,301447-301722,302347-302481
Length = 398
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 625 FPASSESLFFPRFTPRSARFITAFSIPSSFLYTSSCPM 512
F A+ + FFP F S+ F+ + P F +SSCP+
Sbjct: 10 FLAADDHPFFPTFPTSSSSFLLDDTHPFFFPPSSSCPL 47
>09_02_0598 + 11087225-11087455
Length = 76
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 482 SRHQQIWLQQHRARRSIQKAGRNREGRNESGTP 580
S H+QIW + +K R REG N++G P
Sbjct: 41 SIHRQIWANVAEGKAGEEKE-RGREGMNDAGPP 72
>07_03_1544 -
27585581-27585757,27585986-27586091,27586246-27586338,
27587840-27587958,27588486-27588746,27589226-27589515,
27589624-27590152
Length = 524
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 462 FRLPEDGAVI--NRYGFNSIGHDEVYKKLEGIEKAVMNRALLGVNLGKNKLSDDAGKDYV 635
FR+ DG + N Y +N++ + + G+ + N +G N ++DA K V
Sbjct: 158 FRVKSDGVSLYRNPYSWNNVANVMFLESPIGVGFSYSNTTADYSRMGDNSTAEDAYKFLV 217
Query: 636 SGIEKF 653
+ +E+F
Sbjct: 218 NWMERF 223
>06_03_0875 -
25584789-25585307,25585424-25585570,25585734-25585897,
25586015-25586172,25586536-25586904,25586998-25587209,
25587439-25588059,25588561-25588699,25588968-25589044,
25589120-25589800,25590641-25590889
Length = 1111
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = -1
Query: 650 LFNAGHIILPCIIGELILSQIHAEECPIHYGL----LDSFQLFVYFV 522
+FNAG I++P +G L+ I PI +G+ L SF + Y +
Sbjct: 803 IFNAGMIVIPISLGRLVFEAI--PRLPITHGIKCNDLFSFSIGCYII 847
>04_04_0205 + 23591720-23591848,23592640-23592740,23592829-23593222
Length = 207
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 639 RTHNPSLHHRRAYSFPDSRRGV 574
RTH+P +HH+R S D R +
Sbjct: 178 RTHSPDMHHQRKRSREDDERQI 199
>04_01_0615 - 8060085-8060972
Length = 295
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 339 IAAGFDKHGDAVVGLMKLGF----SIIEVGSVTPQPQPGNPKPRV 461
IAAG DK + V+ L + GF + +E TP P P PK V
Sbjct: 24 IAAGHDKVTELVLAL-RAGFEAKRAAVETTPTTPSPMPTLPKAEV 67
>02_05_0286 -
27506925-27507278,27508439-27508812,27509041-27509218,
27510878-27511105,27511215-27511316,27511415-27512131,
27512270-27512387,27512500-27512744,27512854-27513054,
27513920-27514324
Length = 973
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 523 SCPMLLKPYLLMTAPSSGSRKTLGLGFPGCGCGVTEPTSMIEKPSFIRP---TTASPCLS 353
S P LL+P+L + P+S +G G G G T P M E + T +P +
Sbjct: 406 SPPPLLQPHLSLPMPNSSLELAIG-GIGGLGSLGTLPGCMNEFAGGVSSPMGTVITPARA 464
Query: 352 NPAAMPS 332
AA+PS
Sbjct: 465 TGAAIPS 471
>02_02_0413 - 9960271-9960954
Length = 227
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 518 ARRSIQKAGRNREGRNESGTPRRESGKE 601
AR +QK R E RN G+P E GK+
Sbjct: 84 ARWDLQKKRREEEERNGGGSPEPELGKK 111
>02_02_0408 +
9901892-9902004,9903777-9903862,9905019-9905129,
9905182-9905307,9905546-9905673,9906634-9906726,
9907873-9908059,9908877-9909637
Length = 534
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 518 ARRSIQKAGRNREGRNESGTPRRESGKE 601
AR +QK R E RN G+P E GK+
Sbjct: 391 ARWDLQKKRREEEERNGGGSPEPELGKK 418
>05_04_0049 + 17497255-17497908
Length = 217
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 518 ARRSIQKAGRNREGRNESGTPRRESG 595
ARR GRN R E TP RE+G
Sbjct: 55 ARRRATAVGRNPRRRRERETPTRETG 80
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,511,986
Number of Sequences: 37544
Number of extensions: 345435
Number of successful extensions: 1145
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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