Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_M15
         (622 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D57099 Cluster: PREDICTED: similar to CG8545-PA;...    40   0.063
UniRef50_Q54TL4 Cluster: Putative uncharacterized protein; n=1; ...    33   7.3  

>UniRef50_UPI0000D57099 Cluster: PREDICTED: similar to CG8545-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG8545-PA - Tribolium castaneum
          Length = 731

 Score = 39.5 bits (88), Expect = 0.063
 Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 4/106 (3%)
 Frame = +2

Query: 101 MGRKAKFD-ETXXXXXXXXXXXXXQPDPVFRKELLETEDQVKKLTHXXXXXXXXXXXXXX 277
           MGRKA+F+ E              Q DP F K LL  +   KKL+H              
Sbjct: 1   MGRKARFNTEGVLVKRGPGKKAKKQKDPTFPKALLNGDSDAKKLSHRQKQRLKKRLVKRK 60

Query: 278 XXXXXXXXXXQGKKNEAK---EIETNDEDIKKPVVKGYSDDNKEWL 406
                     + ++ + +   +   +  D K    +G++DDNK WL
Sbjct: 61  DVAKVAKESSESEQEDEEVWLKPSVSQNDTKVLPGEGFTDDNKSWL 106


>UniRef50_Q54TL4 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 647

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 332 EIETNDEDIKKPVVKGYSDDNKEWL 406
           E E +D+D  K   KG+SD+N++WL
Sbjct: 80  EEEESDDDFNKKNTKGFSDENQKWL 104


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 332,003,137
Number of Sequences: 1657284
Number of extensions: 3750710
Number of successful extensions: 6760
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6757
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)