Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_M13
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 28 1.0
SPAC17A5.15c |||glutamate-tRNA ligase |Schizosaccharomyces pombe... 28 1.3
SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual 27 1.8
SPBC32H8.03 |bem46||esterase/lipase |Schizosaccharomyces pombe|c... 27 1.8
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 27 1.8
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 27 2.3
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 25 7.2
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 25 9.5
SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|... 25 9.5
SPAC4D7.06c |||siroheme synthase |Schizosaccharomyces pombe|chr ... 25 9.5
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 256 FTPDETGSKFSLTLTERAEWQYSERE 333
FT +E SKF LT+ +W Y E E
Sbjct: 601 FTNEEESSKFKEMLTKAEDWLYEEGE 626
>SPAC17A5.15c |||glutamate-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 716
Score = 27.9 bits (59), Expect = 1.3
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -1
Query: 420 TSIWTATNKETGYLVAPRRSGVEAFDVFFFTF*VLPLSAFCE 295
TS W ATNK+ VAPR + VE+ DV T P + + E
Sbjct: 499 TSFW-ATNKKIIDPVAPRHTAVESGDVVKATIVNGPAAPYAE 539
>SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual
Length = 613
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = -2
Query: 341 FSFSRSEYCHSARSVSVKE-NFDPVSSGV-NAYVGSGGRNANLAAIFPGHGGQQNRQQSS 168
+ F+ +++ S+++ + N D +++G+ N G+GGRN N + G G + Q S
Sbjct: 7 WDFANISGSNTSGSLNLNQLNLDNINNGLHNQEDGAGGRNENSERVGSGSPGSVSMQVLS 66
Query: 167 L 165
L
Sbjct: 67 L 67
>SPBC32H8.03 |bem46||esterase/lipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = +1
Query: 406 SPNARFTILXSHGNAVDLGQMSSFYLGLGTRINCNIXXXXXXXXXXXXXKPSEKNLYADI 585
SP +R T+L H NA ++G + +N N+ PSE L D
Sbjct: 85 SPESRPTLLYFHANAGNMGHRLPIARVFYSALNMNVFIISYRGYGKSTGSPSEAGLKIDS 144
Query: 586 HAA 594
A
Sbjct: 145 QTA 147
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 33 DLVSFVNFIFAIISDL*LIVL 95
DLV FVNF F ISD+ L+++
Sbjct: 368 DLVGFVNFDFTRISDVALLII 388
>SPCC63.04 |mok14||alpha-1,3-glucan synthase
Mok14|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1369
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 293 VKENFDPVSSGVNAYVGSGGRNANL 219
++ENFD V AYV SG N +L
Sbjct: 74 LQENFDSFFPNVEAYVESGNSNGDL 98
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -2
Query: 263 GVNAYVGSGGRNANLAAIFPGHGGQQNRQQS-SLKLNPFILFRYCL*TLVFTKHYPLQNY 87
G+ Y GS R + P + R + ++ LN +LF CL + V Y QN
Sbjct: 454 GLVLYTGSETRIQKNRGLTPSKRSRITRDLNWTIILNFLLLFAMCLFSGVLRSIYSAQNN 513
Query: 86 ESQITDNGEN 57
+++ + +N
Sbjct: 514 SARVFELSKN 523
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/40 (22%), Positives = 21/40 (52%)
Frame = +1
Query: 241 EPTYAFTPDETGSKFSLTLTERAEWQYSEREKENIEGFYS 360
+P+ +T D+ + + +E+ QY +++E +YS
Sbjct: 39 KPSVVYTIDQVKEAYQVLSSEKDRQQYQIKQEEESSHYYS 78
>SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 348
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 118 YLLNTTHYKTMSHKSLIMAKIKFTK 44
+L+N HY +K LI A ++F K
Sbjct: 141 FLINAPHYLNYMYKLLIEAGVEFEK 165
>SPAC4D7.06c |||siroheme synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 264
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 6 WLDRNEIVDDLVSFVNFIFAIISD 77
W DR +V+DL VN + I D
Sbjct: 72 WRDRGFLVEDLSDDVNMVLTAIDD 95
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,434,403
Number of Sequences: 5004
Number of extensions: 45031
Number of successful extensions: 101
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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