Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_M13
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75712-10|CAB00039.2| 332|Caenorhabditis elegans Hypothetical p... 131 5e-31
Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81493-7|CAE46664.1| 342|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81493-6|CAB04038.1| 335|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81061-3|CAB02933.1| 232|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical ... 28 6.6
Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical pr... 27 8.7
U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center... 27 8.7
AF040655-7|AAB95044.2| 565|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z75712-10|CAB00039.2| 332|Caenorhabditis elegans Hypothetical
protein K04G2.2 protein.
Length = 332
Score = 131 bits (316), Expect = 5e-31
Identities = 68/144 (47%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
Frame = +1
Query: 211 IAAKLAFLPPEPTYAFTPDETGSKFSLTLTE-RAEWQYSEREKEN-IEGFYSRTTRGNKI 384
I +KLAF+PPEP+Y T D L L E RA W + E + N +E +RT R N++
Sbjct: 46 IVSKLAFMPPEPSYTITEDN-----KLVLIEGRAAWPHQEVDMANCVEMRITRTRRRNRV 100
Query: 385 ACLFVRCSPNARFTILXSHGNAVDLGQMSSFYLGLGTRINCNIXXXXXXXXXXXXXKPSE 564
AC +R PN+ FT+L SHGNAVDLGQM+SF GLG +NCN+ KPSE
Sbjct: 101 ACTMIRPLPNSHFTLLFSHGNAVDLGQMTSFLYGLGFHLNCNVFSYDYSGYGCSTGKPSE 160
Query: 565 KNLYADIHAAWQAXRTRYGXSPEK 636
KNLYADI AA++ ++ +G EK
Sbjct: 161 KNLYADITAAFELLKSEFGVPKEK 184
>Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical
protein Y41E3.18 protein.
Length = 510
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Frame = +1
Query: 343 IEGFYSRTTRGNKIACLFVRCSPN--ARFTILXSHGNAVDLGQMSSFYLGLGTRIN---- 504
+ GF +T NKI C++V C RFT+L SH N DL S +G+ + I+
Sbjct: 241 VRGFVLKTKNKNKIGCVYVGCPDGFAPRFTLLYSHPNGSDL---SDHLIGIPSLIDIARF 297
Query: 505 --CNIXXXXXXXXXXXXXKPSEKNLYADIHAAWQAXRTRYGXSPEK 636
C + SE NLY+DI A ++ P+K
Sbjct: 298 YRCEVYSYDYTGYGISGGIASESNLYSDIQAIYEHITLEKRVDPKK 343
>Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical
protein C43C3.3 protein.
Length = 446
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +1
Query: 274 GSKFSLTLTERAEWQYSERE---KENIEGFYSRTTRGNKIACLFVRCSPNARFTILXSHG 444
GS+ +TLT+ + +Y+E ++N + + +TTR N + CL+ R RF+ + S+G
Sbjct: 96 GSECDVTLTDLPKHRYAETTVVLEDNADLSFGKTTRLNHVFCLYTRNVKTIRFSDV-SNG 154
Query: 445 NAV 453
+ V
Sbjct: 155 HEV 157
>Z81493-7|CAE46664.1| 342|Caenorhabditis elegans Hypothetical
protein F01D5.7b protein.
Length = 342
Score = 29.9 bits (64), Expect = 1.6
Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 18/149 (12%)
Frame = +1
Query: 208 KIAAKLAFLPPEP--TYAFT----PDETGSKFSLTLTERAEWQYSEREKENIEGFYSRTT 369
+I KLAF PP+ TY P++ E + +R ++ F T+
Sbjct: 38 EIIRKLAFHPPDKGATYRIELKSDPEKDLESVRDCHDEPVQLVVRDRVHPEVKVFSVTTS 97
Query: 370 RGNKIACLFVRCSPN--------ARFTILXSHGNAVDLGQM----SSFYLGLGTRINCNI 513
+ + C V+CSPN A +L ++ DLG S + ++
Sbjct: 98 EDSHLVC--VKCSPNCYSKNPEVANQVVLFCQSSSADLGSFLQPNSMNFSTFANLFETDV 155
Query: 514 XXXXXXXXXXXXXKPSEKNLYADIHAAWQ 600
SEKN+YAD+ A ++
Sbjct: 156 YAFDYSGYGFSSGTQSEKNMYADVRAVYE 184
>Z81493-6|CAB04038.1| 335|Caenorhabditis elegans Hypothetical
protein F01D5.7a protein.
Length = 335
Score = 29.9 bits (64), Expect = 1.6
Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 18/149 (12%)
Frame = +1
Query: 208 KIAAKLAFLPPEP--TYAFT----PDETGSKFSLTLTERAEWQYSEREKENIEGFYSRTT 369
+I KLAF PP+ TY P++ E + +R ++ F T+
Sbjct: 38 EIIRKLAFHPPDKGATYRIELKSDPEKDLESVRDCHDEPVQLVVRDRVHPEVKVFSVTTS 97
Query: 370 RGNKIACLFVRCSPN--------ARFTILXSHGNAVDLGQM----SSFYLGLGTRINCNI 513
+ + C V+CSPN A +L ++ DLG S + ++
Sbjct: 98 EDSHLVC--VKCSPNCYSKNPEVANQVVLFCQSSSADLGSFLQPNSMNFSTFANLFETDV 155
Query: 514 XXXXXXXXXXXXXKPSEKNLYADIHAAWQ 600
SEKN+YAD+ A ++
Sbjct: 156 YAFDYSGYGFSSGTQSEKNMYADVRAVYE 184
>Z81061-3|CAB02933.1| 232|Caenorhabditis elegans Hypothetical
protein F14H8.4 protein.
Length = 232
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 162 FQRTLLPVLLSAMPRKNCGQVSISASRTNVCI 257
F RT PVL +A+P+ N + I+AS T+ I
Sbjct: 187 FHRTFCPVLTNAIPKPNAPPMRIAASPTSAQI 218
>Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical
protein F49E11.4 protein.
Length = 213
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 216 RNFSWAWRTTKQATKFAET*SVHFVSVLFVNTSIY 112
R SW+ + T ATKFAET + V+ SI+
Sbjct: 58 RKISWSKKLTNAATKFAETCPKNHSVVMNTGESIF 92
>AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical
protein ZK973.3 protein.
Length = 451
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 227 ANLAAIFPGHGGQQNRQQSSLKLNPFI 147
A L +F GHGGQQ + S L P++
Sbjct: 67 AFLFGVFDGHGGQQCSRHISTNLYPYL 93
>Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical
protein W04D2.2a protein.
Length = 332
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -2
Query: 155 PFILFRYCL*T--LVFTKHYPLQNYESQITDNGENKIHKTDXIVNNFISV 12
P + F Y L T LVF Y Y I D+G + +NNF+ V
Sbjct: 154 PILYFIYFLFTAPLVFNSKYLAWFYTPMIFDDGATEYFNHSHTINNFLIV 203
>U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center
kinase family protein2 protein.
Length = 829
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 296 SQNALSGNTQNVKKKTSKASTPERRGAT 379
+Q A +GN++N TS ASTP G T
Sbjct: 426 AQKAAAGNSKNRFSSTSIASTPSEDGLT 453
>AF040655-7|AAB95044.2| 565|Caenorhabditis elegans Hypothetical
protein T24E12.9 protein.
Length = 565
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 412 LDCNEQRDRLSCCPSSFWSRSLRCFLFHVLS 320
L+CN Q++ ++ PSS+ + + FL H L+
Sbjct: 36 LECNRQQNNITAKPSSYATANNNIFLEHQLA 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,515,640
Number of Sequences: 27780
Number of extensions: 255332
Number of successful extensions: 596
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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