Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_M03
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 166 1e-41
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 119 2e-27
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 109 2e-24
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 108 3e-24
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 108 3e-24
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 103 8e-23
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 95 5e-20
AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical ... 30 1.6
Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z82262-2|CAB05152.1| 248|Caenorhabditis elegans Hypothetical pr... 28 5.0
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF045639-5|AAC02569.2| 937|Caenorhabditis elegans Osmotic avoid... 27 8.8
AF031408-1|AAB87064.1| 937|Caenorhabditis elegans olfactory cha... 27 8.8
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 27 8.8
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 166 bits (404), Expect = 1e-41
Identities = 79/177 (44%), Positives = 117/177 (66%)
Frame = +3
Query: 123 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 302
MSSIGTGYDL+AS FSPDGR+FQVEYA KAV+N+GT+I +RGK+GVV +KLI+SKLY
Sbjct: 1 MSSIGTGYDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYT 60
Query: 303 PGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYM 482
AN R+F+++++VG+AVAG D + A EA + Y P+P++ + V+ Y+
Sbjct: 61 DNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYI 120
Query: 483 HAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFWLRSRKSQTGSKTEI 653
H +TL RP+G +W G ++++++PSG+++ Y K + +K EI
Sbjct: 121 HIHTL-GISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEI 176
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 119 bits (286), Expect = 2e-27
Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
Frame = +3
Query: 144 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 323
YD + + FSPDG +FQVEYA +AV+ T +G+RGKD +V VEK L + ++I
Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKI 63
Query: 324 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYS 503
ID+HV +A AGL +DAR +V+ AR E +Y+ PV + Y++ ++ +T
Sbjct: 64 HMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSP 123
Query: 504 AVRPYGCSVVMGTWTDYEG-PQMYMLDPSGVSFSY 605
RP+G S+++G + D++G P+++ +PSG + Y
Sbjct: 124 GRRPFGISMLIGGF-DHDGTPRLFKTEPSGAYYEY 157
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 109 bits (261), Expect = 2e-24
Identities = 49/150 (32%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +3
Query: 144 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGA-NKR 320
YD + FSP+GR++QVEYA +A+ ++GT +G+ +G+V A E+ KL + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEK 64
Query: 321 IFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLY 500
++ + +++ VAG+ +DA ++ R A++YR+ YG +P++ L + + YT
Sbjct: 65 VYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQI 124
Query: 501 SAVRPYGCSVVMGTWTDYEGPQMYMLDPSG 590
RP+G S++ W + G Q+Y DPSG
Sbjct: 125 GGKRPFGVSLLYIGWDKHYGYQLYQSDPSG 154
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 108 bits (260), Expect = 3e-24
Identities = 58/153 (37%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Frame = +3
Query: 144 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 323
YD + FSP+GR+FQVEYA +AV+ T IG++ +GV+ A EK TSKL A ++I
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKI 67
Query: 324 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAY---- 491
+D+H+G+ AGLI+D+R +VE A+ EA N+ Y + ++ + + V+ +
Sbjct: 68 SKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDD 127
Query: 492 TLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSG 590
S RP+G +++ D EG +++ LDPSG
Sbjct: 128 VKASMSRPFGVAMLF-AGVDQEGAKLFHLDPSG 159
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 108 bits (260), Expect = 3e-24
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 1/173 (0%)
Frame = +3
Query: 132 IGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGA 311
+G Y S + FSP G++ Q+EYA AV+N +GLR KDGVV A E + S L +
Sbjct: 1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATEN-VGSVLTDD-- 57
Query: 312 NKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAY 491
++ I +H+G +G+ D R +V+ AR A Y YG +P L ++ M Y
Sbjct: 58 QPKVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEY 117
Query: 492 TLYSAVRPYGCSVVMGTWTDYEG-PQMYMLDPSGVSFSYFWLRSRKSQTGSKT 647
T VRP+G S+++ W G P ++ DPSG F++ K+ +KT
Sbjct: 118 TQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKT 170
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 103 bits (248), Expect = 8e-23
Identities = 48/151 (31%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Frame = +3
Query: 141 GYDLSASQFSPDGRVFQVEYAAKAVENSG-TVIGLRGKDGVVFAVEKLITSKLYEPGANK 317
G+D + FSP+GRV+QVEYA KA+ ++ T + ++G D V AV+K + L
Sbjct: 8 GFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVT 67
Query: 318 RIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTL 497
++ I + VG G+I DA+ ++ A+ EA++++ + G +P + L ++++ YT
Sbjct: 68 SVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQ 127
Query: 498 YSAVRPYGCSVVMGTWTDYEGPQMYMLDPSG 590
+ +R GC+++ ++ D +GP++Y +DP+G
Sbjct: 128 NAEMRSLGCALLFISYDDEKGPEVYRVDPAG 158
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 94.7 bits (225), Expect = 5e-20
Identities = 47/148 (31%), Positives = 81/148 (54%)
Frame = +3
Query: 144 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 323
YD + +SP GR+ QVEYA +A++ +G++ + V K + L K++
Sbjct: 6 YDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDL--SSHQKKV 63
Query: 324 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYS 503
+ ID H G+++AGL+SD R + ++E S++R Y VP+K L E + + + A T Y
Sbjct: 64 YEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYY 123
Query: 504 AVRPYGCSVVMGTWTDYEGPQMYMLDPS 587
RP+G +++ + D +G + DPS
Sbjct: 124 GRRPFGVGILIAGY-DKDGAHIIQTDPS 150
>AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical
protein Y71H2AM.10 protein.
Length = 871
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = -3
Query: 409 ASERAVSTICLASDMSPATAMPTCSSIWNILLFAPGSYSLDV-INFSTANTTPS----FP 245
A + + C++SD + PTCSS++ + GS V ++ TT S FP
Sbjct: 327 AEDVTTQSHCISSDANIIKVSPTCSSVYLDGSESNGSSDAQVYAHYLRYTTTYSFRVWFP 386
Query: 244 RRPITVPEFSTAFAAYSTWK 185
+ P+ + S+ + WK
Sbjct: 387 KLPLKIWMSSSTLSTIKNWK 406
>Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical
protein T21B10.2b protein.
Length = 337
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 99 KYIKQCVNMSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIG 239
KYI + I G D++AS+F DG+ + +++ A ++S + G
Sbjct: 132 KYIAELAGTGKISIGMDVAASEFFKDGK-YDLDFKNPASDSSKWLSG 177
>Z82262-2|CAB05152.1| 248|Caenorhabditis elegans Hypothetical
protein C43F9.5 protein.
Length = 248
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 460 MNEFQCTCTHTHYTALFGHMVAQSLWAHGQTMKXLRC 570
MN CT T YT G + A S GQT RC
Sbjct: 143 MNGICCTTTGNEYTGSCGGLPAISACGTGQTCGSFRC 179
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -3
Query: 394 VSTICLASDMSPATAMPTCSSIWNILLFAPGSYSLDVINFSTANTTPSF--PRRPITVPE 221
++T + + +TA+PT ++ P SL I FST P+F + P T+P
Sbjct: 293 ITTTTMTTTTRTSTAIPTTTT-------TPRQISLQTIPFSTTTRQPNFDKTKTPATMPS 345
Query: 220 FSTA 209
S++
Sbjct: 346 ASSS 349
>AF045639-5|AAC02569.2| 937|Caenorhabditis elegans Osmotic
avoidance abnormal protein9 protein.
Length = 937
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 198 YAAKAVENSGTVIGLRGKDG----VVFAVEKLITSKLYEPGANKRIFHIDEHV 344
Y AV G +I + +DG + FA EKL+T LY+ G N ++ +++
Sbjct: 40 YKWVAVRKGGELINIYERDGEEGVLKFAEEKLLTI-LYDEGQNPKLVTYSDYI 91
>AF031408-1|AAB87064.1| 937|Caenorhabditis elegans olfactory
channel protein.
Length = 937
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 198 YAAKAVENSGTVIGLRGKDG----VVFAVEKLITSKLYEPGANKRIFHIDEHV 344
Y AV G +I + +DG + FA EKL+T LY+ G N ++ +++
Sbjct: 40 YKWVAVRKGGELINIYERDGEEGVLKFAEEKLLTI-LYDEGQNPKLVTYSDYI 91
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 188 PSGICCKGCRKFWNSNWPPRKRRSG 262
P + C GC+K S++ R+ R+G
Sbjct: 1535 PPNLTCSGCKKILGSDYSLRRHRAG 1559
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,124,109
Number of Sequences: 27780
Number of extensions: 353894
Number of successful extensions: 896
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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