Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_M01
         (549 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   1.0  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   2.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 219 DHENQLHEYISKILQNLLDPR**PFWEVQYLISLI 115
           D   ++ +Y+S  L+N+ D R  P  E  YL  LI
Sbjct: 8   DFAKEMIDYVSGYLENIRDRRVLPTVEPGYLRPLI 42


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 451 KGVQRLEGSQCSNRELLQMLFEEEDN 528
           K V RL+  QCS+R + + L  + DN
Sbjct: 7   KSVFRLDQDQCSHRIVREHLGLKHDN 32


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 451 KGVQRLEGSQCSNRELLQMLFEEEDN 528
           K V RL+  QCS+R + + L  + DN
Sbjct: 321 KSVFRLDQDQCSHRIVREHLGLKHDN 346


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 451 KGVQRLEGSQCSNRELLQMLFEEEDN 528
           K V RL+  QCS+R + + L  + DN
Sbjct: 554 KSVFRLDQDQCSHRIVREHLGLKHDN 579


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 451 KGVQRLEGSQCSNRELLQMLFEEEDN 528
           K V RL+  QCS+R + + L  + DN
Sbjct: 554 KSVFRLDQDQCSHRIVREHLGLKHDN 579


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,008
Number of Sequences: 336
Number of extensions: 2598
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)