Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_L22
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   1.2  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   1.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.0  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   6.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.8  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 199 SGEDWTPDADSNEPASRTGRKRVSKAPVNNTK 294
           SG+   P +DS     RTG KR       +T+
Sbjct: 22  SGQQHGPQSDSRNQQLRTGEKRKRSTSSQSTE 53


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -3

Query: 556 STSSVHQVLILQYLHP 509
           S SS H VLI Q LHP
Sbjct: 56  SPSSAHTVLIPQPLHP 71


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 190 ILLVQRPALTHPNLLRLTL 134
           + L Q PAL+ PNLL L+L
Sbjct: 455 VSLSQVPALSTPNLLSLSL 473


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 35  GFPKSKIXISVGLSRYRTFFVQY 103
           GFPKSKI + V     R+F +Q+
Sbjct: 407 GFPKSKIVLGVPFFG-RSFTLQF 428


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 142 NEEDSDGSGQGAEPEEFQDSGEDWTPD 222
           +E+D    GQG+     +D  ++ T D
Sbjct: 181 DEQDDGDDGQGSSTNNDEDDDDEETGD 207


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 142 NEEDSDGSGQGAEPEEFQDSGEDWTPD 222
           +E+D    GQG+     +D  ++ T D
Sbjct: 181 DEQDDGDDGQGSSTNNDEDDDDEETGD 207


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 142 NEEDSDGSGQGAEPEEFQDSGEDWTPD 222
           +E+D    GQG+     +D  ++ T D
Sbjct: 181 DEQDDGDDGQGSSTNNDEDDDDEETGD 207


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 568 CHQFSTSSVHQVLILQYLHPILH 500
           CH  S SS HQ ++  + +P+ H
Sbjct: 334 CHPLSLSSDHQAML--HHNPMSH 354


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,479
Number of Sequences: 336
Number of extensions: 2951
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)