Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P06_F_L21
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0269 - 42414345-42415328,42415419-42415551,42415939-424160...   101   7e-22
10_08_0655 - 19621717-19622594,19623186-19623227,19624323-196244...    38   0.007
05_03_0122 - 8669422-8669609,8669759-8670111,8670669-8670824,867...    29   3.2  
05_03_0482 - 14568108-14568284,14568912-14569970,14570532-145712...    28   5.6  
08_01_0199 + 1628158-1629192                                           28   7.5  
12_01_0817 - 7504778-7504837,7505013-7505260,7506049-7506214,750...    27   9.9  

>01_07_0269 -
           42414345-42415328,42415419-42415551,42415939-42416007,
           42416459-42416672,42416785-42417040
          Length = 551

 Score =  101 bits (241), Expect = 7e-22
 Identities = 57/153 (37%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
 Frame = +3

Query: 156 GLSRLGD-CEVCAANKALYTCPKCEVKTCCLNCVRIHKKELECDGIRDRTKFIRMKDFTD 332
           G S+ G  CE C      Y CP C   TC L CV+ HK+   C G R RT  + + +F D
Sbjct: 21  GESKKGSPCEECGEQPWKYRCPGCSRLTCSLPCVQSHKRRTACTGKRPRTDPVPLANFDD 80

Query: 333 TDLLSDYRLLEECARFVWGVKR---DDKKRFTRI-DKDLPIHLFKLKMAARQRGIVLQFL 500
             LLSDY  LEE  +      R      + +       LP  LF L+ AA++RGI LQFL
Sbjct: 81  HQLLSDYSFLEETKQVAESAHRLIGAFGRNYGGFGGAQLPKWLFYLRKAAQRRGIWLQFL 140

Query: 501 AQNFTRHKNNTTRYNYKSNLINWRVEWIFPNVD 599
            +   R + N +R+N++ + I W +EW F + D
Sbjct: 141 PRGMARREQNRSRHNHRKDCIYWTLEWKFNSTD 173


>10_08_0655 -
           19621717-19622594,19623186-19623227,19624323-19624479,
           19625333-19625405,19625483-19625595
          Length = 420

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
 Frame = +3

Query: 177 CEVCAANKALYTCPKCEVKTCCLNCVRIHK----KELECDGIRDRTKFIRMKDFTD---T 335
           C VC    A YTCP+C  + C L C + H     +    + + D  K ++ +D +     
Sbjct: 36  CRVCQKQFAQYTCPRCNARYCSLPCYKGHSVQCTESFMRENVMDELKQMQPEDESKKKML 95

Query: 336 DLLSDYRLLEE 368
           D+L  + L EE
Sbjct: 96  DILKRFHLEEE 106


>05_03_0122 -
           8669422-8669609,8669759-8670111,8670669-8670824,
           8670999-8671168,8672133-8672297,8673190-8673384,
           8673506-8673634,8673759-8673980
          Length = 525

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = +3

Query: 489 LQFLAQNFTRHKNNTTRYNYKSNLIN-WRVEWIFPNVDKE 605
           + F+  NF+    N T  N     +  W  EW  PN  KE
Sbjct: 439 IDFIKSNFSSELKNVTTQNGPLTFVGEWVAEWRVPNATKE 478


>05_03_0482 -
           14568108-14568284,14568912-14569970,14570532-14571236,
           14571376-14571656,14571748-14571769
          Length = 747

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 19/80 (23%), Positives = 33/80 (41%)
 Frame = +3

Query: 306 FIRMKDFTDTDLLSDYRLLEECARFVWGVKRDDKKRFTRIDKDLPIHLFKLKMAARQRGI 485
           F+   D     ++   +L++ C      + RDDK+ F  +  D  +   K  M  +    
Sbjct: 401 FVHPGDIIQNFIVQYEKLVQSC------LDRDDKQLFLTVKTDANLWS-KFPMEEQASKF 453

Query: 486 VLQFLAQNFTRHKNNTTRYN 545
             + + + F  H  NTT YN
Sbjct: 454 YTRAIFERFQEHLKNTTMYN 473


>08_01_0199 + 1628158-1629192
          Length = 344

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 267 KELECDGIRDRTKFIRMKDFTDTDLLSDYRLLEEC 371
           K  +C G R    F+R +D   +  + D RL+ EC
Sbjct: 120 KHKKCKGKRGTRAFMRRRDLESSAFVRDDRLIVEC 154


>12_01_0817 -
           7504778-7504837,7505013-7505260,7506049-7506214,
           7506226-7506330
          Length = 192

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 192 ANKALYTCPKCEVKTCCLNCVRIHK 266
           + K  Y CP C  +TC    V  HK
Sbjct: 99  STKGKYACPSCHTETCYHRLVNGHK 123


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,843,324
Number of Sequences: 37544
Number of extensions: 282385
Number of successful extensions: 614
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)