Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_L16
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002366-1|AAH02366.1| 820|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 1.5
AF026402-1|AAB87902.1| 820|Homo sapiens U5 snRNP 100 kD protein... 32 1.5
BC113391-1|AAI13392.1| 839|Homo sapiens RBM25 protein protein. 31 2.7
BC113389-1|AAI13390.1| 839|Homo sapiens RBM25 protein protein. 31 2.7
AL512443-2|CAH70059.1| 320|Homo sapiens zinc finger, RAN-bindin... 31 2.7
AL512443-1|CAH70058.1| 330|Homo sapiens zinc finger, RAN-bindin... 31 2.7
AL136945-1|CAB66879.1| 311|Homo sapiens hypothetical protein pr... 31 2.7
AK222858-1|BAD96578.1| 330|Homo sapiens zinc finger protein 265... 31 2.7
AF109907-1|AAC97961.1| 735|Homo sapiens S164 protein. 31 2.7
AF065392-1|AAD09747.1| 311|Homo sapiens ZIS2 protein. 31 2.7
AF065391-1|AAD09746.1| 337|Homo sapiens ZIS1 protein. 31 2.7
AC004858-3|AAF19255.1| 784|Homo sapiens WUGSC:H_DJ0687K01.2 pro... 31 2.7
AB209568-1|BAD92805.1| 316|Homo sapiens zinc finger protein 265... 31 2.7
AK026107-1|BAB15362.1| 430|Homo sapiens protein ( Homo sapiens ... 31 4.7
BC039814-1|AAH39814.1| 320|Homo sapiens zinc finger, RAN-bindin... 30 8.2
>BC002366-1|AAH02366.1| 820|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23 protein.
Length = 820
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRV--HRRHSSKITAPLETLSTREH 409
DRDRDR + ++ KR SRD R+RS K RRH + + ++
Sbjct: 31 DRDRDRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKSAERERRHKERERDKERDRNKKDR 90
Query: 410 YRQRDSQEQE 439
R +D ++
Sbjct: 91 DRDKDGHRRD 100
>AF026402-1|AAB87902.1| 820|Homo sapiens U5 snRNP 100 kD protein
protein.
Length = 820
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRV--HRRHSSKITAPLETLSTREH 409
DRDRDR + ++ KR SRD R+RS K RRH + + ++
Sbjct: 31 DRDRDRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKSAERERRHKERERDKERDRNKKDR 90
Query: 410 YRQRDSQEQE 439
R +D ++
Sbjct: 91 DRDKDGHRRD 100
>BC113391-1|AAI13392.1| 839|Homo sapiens RBM25 protein protein.
Length = 839
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
DRDRDR RN RS SR+ +R R + R + E RE R
Sbjct: 362 DRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERERER 421
Query: 416 QRDSQ 430
++D +
Sbjct: 422 EKDKK 426
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
DRDRDR + R+ +RSS R+ R +S + R + E RE R
Sbjct: 354 DRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERER 413
Query: 416 QRDSQEQ 436
+R+ + +
Sbjct: 414 ERERERE 420
>BC113389-1|AAI13390.1| 839|Homo sapiens RBM25 protein protein.
Length = 839
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
DRDRDR RN RS SR+ +R R + R + E RE R
Sbjct: 362 DRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERERER 421
Query: 416 QRDSQ 430
++D +
Sbjct: 422 EKDKK 426
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
DRDRDR + R+ +RSS R+ R +S + R + E RE R
Sbjct: 354 DRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERER 413
Query: 416 QRDSQEQ 436
+R+ + +
Sbjct: 414 ERERERE 420
>AL512443-2|CAH70059.1| 320|Homo sapiens zinc finger, RAN-binding
domain containing 2 protein.
Length = 320
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
D D D + N+ S DS + RS + H R SS+ ++P + S R R
Sbjct: 172 DEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRS-RSRSR 230
Query: 416 QRDSQEQE 439
R S +
Sbjct: 231 SRSSSSSQ 238
>AL512443-1|CAH70058.1| 330|Homo sapiens zinc finger, RAN-binding
domain containing 2 protein.
Length = 330
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
D D D + N+ S DS + RS + H R SS+ ++P + S R R
Sbjct: 172 DEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRS-RSRSR 230
Query: 416 QRDSQEQE 439
R S +
Sbjct: 231 SRSSSSSQ 238
>AL136945-1|CAB66879.1| 311|Homo sapiens hypothetical protein
protein.
Length = 311
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
D D D + N+ S DS + RS + H R SS+ ++P + S R R
Sbjct: 172 DEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRS-RSRSR 230
Query: 416 QRDSQEQE 439
R S +
Sbjct: 231 SRSSSSSQ 238
>AK222858-1|BAD96578.1| 330|Homo sapiens zinc finger protein 265
isoform 1 variant protein.
Length = 330
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
D D D + N+ S DS + RS + H R SS+ ++P + S R R
Sbjct: 172 DEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRS-RSRSR 230
Query: 416 QRDSQEQE 439
R S +
Sbjct: 231 SRSSSSSQ 238
>AF109907-1|AAC97961.1| 735|Homo sapiens S164 protein.
Length = 735
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
DRDRDR RN RS SR+ +R R + R + E RE R
Sbjct: 258 DRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERERER 317
Query: 416 QRDSQ 430
++D +
Sbjct: 318 EKDKK 322
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
DRDRDR + R+ +RSS R+ R +S + R + E RE R
Sbjct: 250 DRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERER 309
Query: 416 QRDSQEQ 436
+R+ + +
Sbjct: 310 ERERERE 316
>AF065392-1|AAD09747.1| 311|Homo sapiens ZIS2 protein.
Length = 311
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
D D D + N+ S DS + RS + H R SS+ ++P + S R R
Sbjct: 172 DEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRS-RSRSR 230
Query: 416 QRDSQEQE 439
R S +
Sbjct: 231 SRSSSSSQ 238
>AF065391-1|AAD09746.1| 337|Homo sapiens ZIS1 protein.
Length = 337
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
D D D + N+ S DS + RS + H R SS+ ++P + S R R
Sbjct: 172 DEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRS-RSRSR 230
Query: 416 QRDSQEQE 439
R S +
Sbjct: 231 SRSSSSSQ 238
>AC004858-3|AAF19255.1| 784|Homo sapiens WUGSC:H_DJ0687K01.2
protein.
Length = 784
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
DRDRDR RN RS SR+ +R R + R + E RE R
Sbjct: 307 DRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERERER 366
Query: 416 QRDSQ 430
++D +
Sbjct: 367 EKDKK 371
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
DRDRDR + R+ +RSS R+ R +S + R + E RE R
Sbjct: 299 DRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERER 358
Query: 416 QRDSQEQ 436
+R+ + +
Sbjct: 359 ERERERE 365
>AB209568-1|BAD92805.1| 316|Homo sapiens zinc finger protein 265
isoform 1 variant protein.
Length = 316
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
D D D + N+ S DS + RS + H R SS+ ++P + S R R
Sbjct: 174 DEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRS-RSRSR 232
Query: 416 QRDSQEQE 439
R S +
Sbjct: 233 SRSSSSSQ 240
>AK026107-1|BAB15362.1| 430|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22454 fis, clone HRC09703. ).
Length = 430
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
DRDRDR + R+ +RSS R+ R +S + R + E RE R
Sbjct: 358 DRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERER 417
Query: 416 QRDSQEQ 436
+R+ + +
Sbjct: 418 ERERERE 424
>BC039814-1|AAH39814.1| 320|Homo sapiens zinc finger, RAN-binding
domain containing 2 protein.
Length = 320
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +2
Query: 236 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIAMKRVHRRHSSKITAPLETLSTREHYR 415
D D D + N+ S DS + RS H R SS+ ++P + S R R
Sbjct: 172 DEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSGSSHSRSSSRSSSPSSSRS-RSRSR 230
Query: 416 QRDSQEQE 439
R S +
Sbjct: 231 SRSSSSSQ 238
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,166,611
Number of Sequences: 237096
Number of extensions: 1410373
Number of successful extensions: 3026
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2941
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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