Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P06_F_L09
(650 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q86BL4 Cluster: CG33649-PA, isoform A; n=1; Drosophila ... 74 3e-12
UniRef50_Q16Q94 Cluster: Putative uncharacterized protein; n=1; ... 69 7e-11
UniRef50_UPI0000D56BFF Cluster: PREDICTED: similar to CG33649-PA... 64 3e-09
UniRef50_Q7QI02 Cluster: ENSANGP00000018628; n=1; Anopheles gamb... 63 5e-09
UniRef50_UPI00015B5D97 Cluster: PREDICTED: similar to CG33649-PA... 57 3e-07
UniRef50_UPI00004492B2 Cluster: PREDICTED: similar to 15E1.2 (no... 51 3e-05
UniRef50_A2BHB7 Cluster: Novel protein; n=4; Clupeocephala|Rep: ... 50 5e-05
UniRef50_UPI0000587451 Cluster: PREDICTED: hypothetical protein;... 49 8e-05
UniRef50_Q9BI40 Cluster: Putative uncharacterized protein; n=2; ... 44 0.002
UniRef50_O43716 Cluster: GatC-like protein; n=6; Theria|Rep: Gat... 43 0.007
UniRef50_UPI000155D43C Cluster: PREDICTED: similar to OTTHUMP000... 42 0.013
UniRef50_UPI0000D9CF1A Cluster: PREDICTED: similar to CG33649-PA... 42 0.013
UniRef50_A7HN70 Cluster: Glutamyl-tRNA(Gln) amidotransferase, C ... 38 0.21
UniRef50_Q1UZC9 Cluster: Glu-tRNA Gln amidotransferase C subunit... 36 0.84
UniRef50_A4DH38 Cluster: Integrase; n=3; Listeria|Rep: Integrase... 36 1.1
UniRef50_Q4HEI8 Cluster: Probable integral membrane protein Cj00... 34 3.4
UniRef50_Q9JZ00 Cluster: Glutamyl-tRNA(Gln) amidotransferase sub... 34 3.4
UniRef50_Q2SRE2 Cluster: Glutamyl-tRNA(Gln) amidotransferase, C ... 33 5.9
UniRef50_A6LJL8 Cluster: Glutamyl-tRNA(Gln) amidotransferase, C ... 33 5.9
UniRef50_A6REW6 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 5.9
UniRef50_Q73QG0 Cluster: Membrane protein, putative; n=1; Trepon... 33 7.8
UniRef50_A0BEK0 Cluster: Chromosome undetermined scaffold_102, w... 33 7.8
>UniRef50_Q86BL4 Cluster: CG33649-PA, isoform A; n=1; Drosophila
melanogaster|Rep: CG33649-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 148
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +3
Query: 165 SKVPSNPV-STVQNEDKNKICIDPSTITLLERLSLVKYDTPKGIKVLEDSITFANKILHI 341
+KVP PV S + ++I ID TI LLERLSLV D+ + + L+ SI FA+KI HI
Sbjct: 33 TKVPQTPVDSKFPDTSASEIQIDTKTIQLLERLSLVDLDSERALATLKSSIQFADKIAHI 92
Query: 342 NTDNIEPLYTTLENE 386
NT+++ PLYT LE++
Sbjct: 93 NTEHVRPLYTVLEHQ 107
Score = 53.2 bits (122), Expect = 5e-06
Identities = 20/42 (47%), Positives = 34/42 (80%)
Frame = +2
Query: 524 MLIYRNLNLRPDKITQGNCQKDILKNATVKEDDYFVAPTGNI 649
+L ++ L LR D++T+G+C+ ++L+NA V ++DYFV+P GNI
Sbjct: 103 VLEHQQLQLRNDQVTEGDCRAEVLRNAKVTDEDYFVSPPGNI 144
>UniRef50_Q16Q94 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 178
Score = 69.3 bits (162), Expect = 7e-11
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Frame = +3
Query: 165 SKVPSNPVSTV---QNEDKNKICIDPSTITLLERLSLVKYDTPKGIKVLEDSITFANKIL 335
+KVP P + + E +I +D T+ LLERLSLV D+ + + LEDSI FA++IL
Sbjct: 52 TKVPQQPHKSDIDRRQEPVPRISVDDQTVQLLERLSLVDLDSKEAHRTLEDSIEFASRIL 111
Query: 336 HINTDNIEPLYTTLENE 386
I+TD +EPLYT LE +
Sbjct: 112 AIDTDGVEPLYTVLEKQ 128
Score = 49.2 bits (112), Expect = 8e-05
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 536 RNLNLRPDKITQGNCQKDILKNATVKEDDYFVAPTGNI 649
+ L LR D ++ GN Q+D+L NA + E++YFVAP GNI
Sbjct: 128 QKLALREDVVSDGNLQEDVLSNARITEEEYFVAPPGNI 165
>UniRef50_UPI0000D56BFF Cluster: PREDICTED: similar to CG33649-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG33649-PA, isoform A - Tribolium castaneum
Length = 156
Score = 64.1 bits (149), Expect = 3e-09
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Frame = +3
Query: 135 IQRILSKNYCSKVPSNPVSTVQNEDKNKI----CIDPSTITLLERLSLVKYDTPKGIKVL 302
IQ + NY VP P T D+NK+ ID TI LLERLSLV +GI+ L
Sbjct: 16 IQSVGKVNYF--VPKAP--TRSKIDRNKLPPRTSIDAKTIALLERLSLVDCANKQGIETL 71
Query: 303 EDSITFANKILHINTDNIEPLYTTLEN 383
ED+I FA++I ++T NIEPL T LE+
Sbjct: 72 EDAIAFADQIQQVDTSNIEPLVTVLED 98
Score = 53.6 bits (123), Expect = 4e-06
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +2
Query: 536 RNLNLRPDKITQGNCQKDILKNATVKEDDYFVAPTGNI 649
R L R D +T+GNC++DIL+NA + E++YF+AP GNI
Sbjct: 99 RPLRTREDCVTEGNCREDILQNAEITEEEYFIAPPGNI 136
>UniRef50_Q7QI02 Cluster: ENSANGP00000018628; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000018628 - Anopheles gambiae
str. PEST
Length = 177
Score = 63.3 bits (147), Expect = 5e-09
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Frame = +3
Query: 165 SKVPSNPVSTVQNEDKNK----ICIDPSTITLLERLSLVKYDTPKGIKVLEDSITFANKI 332
+KVP + + D N+ + I T+ LLERLSLV D+ + + L+DSI FA++I
Sbjct: 55 TKVPQQTHRSTEPADGNQQSAPVVISHQTVRLLERLSLVDLDSQEALGTLQDSIEFASRI 114
Query: 333 LHINTDNIEPLYTTLENE 386
L I TD +EPLY+ LE +
Sbjct: 115 LPIGTDGVEPLYSVLERD 132
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/44 (50%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Frame = +2
Query: 521 YMLIYRN-LNLRPDKITQGNCQKDILKNATVKEDDYFVAPTGNI 649
Y ++ R+ L LRPD + G+ Q ++L+NAT+ E++YFVAP GNI
Sbjct: 126 YSVLERDKLALRPDTVDDGDRQTEVLQNATITEEEYFVAPPGNI 169
>UniRef50_UPI00015B5D97 Cluster: PREDICTED: similar to CG33649-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG33649-PA - Nasonia vitripennis
Length = 145
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +3
Query: 192 TVQNEDKNKICIDPSTITLLERLSLVKYDTPKGIKVLEDSITFANKILHINTD-NIEPLY 368
TV E I ID TI+ LER+SLV +D GI+ LE +I FA K+ + D +++P+Y
Sbjct: 39 TVNKEFTTDIKIDRKTISKLERISLVDFDNDGGIQRLEAAIRFARKLQEVQLDPSVKPMY 98
Query: 369 TTLENE 386
+ LENE
Sbjct: 99 SVLENE 104
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = +2
Query: 479 LETIFMFKSTKFF*YMLIYRNLNLRPDKITQGNCQKDILKNATVKEDDYFVAPTGNI 649
L+ + + S K +L L+LR DK+T+ C++ ILKNA + ED+YFVAP+GNI
Sbjct: 85 LQEVQLDPSVKPMYSVLENERLHLREDKVTEHTCREQILKNARLLEDEYFVAPSGNI 141
>UniRef50_UPI00004492B2 Cluster: PREDICTED: similar to 15E1.2 (novel
protein); n=2; Gallus gallus|Rep: PREDICTED: similar to
15E1.2 (novel protein) - Gallus gallus
Length = 151
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +2
Query: 536 RNLNLRPDKITQGNCQKDILKNATVKEDDYFVAPTGNI 649
R L LR D +T+GNC ++LKNA K ++YFVAP GNI
Sbjct: 99 RCLYLREDDVTEGNCTAELLKNAREKVEEYFVAPPGNI 136
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = +3
Query: 249 LERLSLVKYDTPKGIKVLEDSITFANKILHINTDNIEPLYTTLEN 383
LERL+LV + +G++ L +++ FA ++ +NT+ IEPL + LE+
Sbjct: 54 LERLALVDFRDAEGVERLREAVRFAERLREVNTEGIEPLDSVLED 98
>UniRef50_A2BHB7 Cluster: Novel protein; n=4; Clupeocephala|Rep:
Novel protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 184
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +3
Query: 168 KVPSNPV--STVQNEDKNKICIDPSTITLLERLSLVKYDTPKGIKVLEDSITFANKILHI 341
KVP P +++ I P + LERL+LV + + +G+ LE +I FA+++ I
Sbjct: 56 KVPQTPTWEPVAESQLPPATRISPDLVDKLERLALVDFGSEEGVDCLEKAIRFADQLHVI 115
Query: 342 NTDNIEPLYTTLEN 383
NTD +EP+ + LE+
Sbjct: 116 NTDGVEPMDSVLED 129
Score = 41.1 bits (92), Expect = 0.022
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 536 RNLNLRPDKITQGNCQKDILKNATVKEDDYFVAPTGNI 649
R L LR D +T+G C +++L+ A ++YF+AP GNI
Sbjct: 130 RELYLRDDTVTEGECAEELLQLAKHTVEEYFLAPPGNI 167
>UniRef50_UPI0000587451 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 128
Score = 49.2 bits (112), Expect = 8e-05
Identities = 21/53 (39%), Positives = 37/53 (69%)
Frame = +3
Query: 225 IDPSTITLLERLSLVKYDTPKGIKVLEDSITFANKILHINTDNIEPLYTTLEN 383
+DP TI LERL+LV +++ G++ LE +IT A ++ ++T +EP+ + LE+
Sbjct: 18 VDPQTIENLERLALVNFNSSAGVERLEHAITLAEQLDDVDTTGVEPMASVLED 70
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +2
Query: 536 RNLNLRPDKITQGNCQKDILKNATVKEDDYFVAPTGNI 649
R L LR D +T+G C ++IL NA ++YFVAP GNI
Sbjct: 71 RELYLRDDTVTEGYCAEEILMNAAKTCEEYFVAPPGNI 108
>UniRef50_Q9BI40 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 175
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 171 VPSNPV-STVQNEDKNKIC-IDPSTITLLERLSLVKYDTPKGIKVLEDSITFANKILHIN 344
VP P S +Q + + ID I LERLSLV++D+ + + L SI A ++ ++
Sbjct: 28 VPDEPYDSKIQESQLSPMPQIDAKLINHLERLSLVRFDSEQAVANLRSSIRVAKRLELVD 87
Query: 345 TDNIEPLYTTLENE 386
+ +EP++T E++
Sbjct: 88 VEGVEPMHTVWEDQ 101
>UniRef50_O43716 Cluster: GatC-like protein; n=6; Theria|Rep:
GatC-like protein - Homo sapiens (Human)
Length = 136
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 536 RNLNLRPDKITQGNCQKDILKNATVKEDDYFVAPTGNI 649
R L LR D + +GNC ++L+N+ ++YFVAP GNI
Sbjct: 85 RCLYLRSDNVVEGNCADELLQNSHRVVEEYFVAPPGNI 122
Score = 42.3 bits (95), Expect = 0.010
Identities = 19/53 (35%), Positives = 35/53 (66%)
Frame = +3
Query: 225 IDPSTITLLERLSLVKYDTPKGIKVLEDSITFANKILHINTDNIEPLYTTLEN 383
I + I LERL+LV + + + + LE +I FA+++ ++TD +EP+ + LE+
Sbjct: 32 ITAAVIEHLERLALVDFGSREAVARLEKAIAFADRLRAVDTDGVEPMESVLED 84
>UniRef50_UPI000155D43C Cluster: PREDICTED: similar to
OTTHUMP00000045454; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to OTTHUMP00000045454 -
Ornithorhynchus anatinus
Length = 106
Score = 41.9 bits (94), Expect = 0.013
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +2
Query: 542 LNLRPDKITQGNCQKDILKNATVKEDDYFVAPTG 643
L LR D++ +GNC +++L+NA+ ++YFVAP G
Sbjct: 4 LYLRADEVAEGNCAEELLQNASRTVEEYFVAPPG 37
>UniRef50_UPI0000D9CF1A Cluster: PREDICTED: similar to CG33649-PA,
isoform A; n=1; Macaca mulatta|Rep: PREDICTED: similar
to CG33649-PA, isoform A - Macaca mulatta
Length = 115
Score = 41.9 bits (94), Expect = 0.013
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2
Query: 542 LNLRPDKITQGNCQKDILKNATVKEDDYFVAPTGNI 649
L LR D + +GNC ++L+N+ ++YFVAP GNI
Sbjct: 66 LYLRSDNVVEGNCADELLQNSHRVVEEYFVAPPGNI 101
>UniRef50_A7HN70 Cluster: Glutamyl-tRNA(Gln) amidotransferase, C
subunit; n=1; Fervidobacterium nodosum Rt17-B1|Rep:
Glutamyl-tRNA(Gln) amidotransferase, C subunit -
Fervidobacterium nodosum Rt17-B1
Length = 95
Score = 37.9 bits (84), Expect = 0.21
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 219 ICIDPSTITLLERLS-LVKYDTPKGIKVLEDSITFANKILHINTDNIEPLYTTLE 380
I ID I L +LS L DT K K L+ I + + +NT+NIEP+YT +E
Sbjct: 3 IKIDDKLIDHLSKLSRLTVSDTEKLKKDLQKIIDYFEILSEVNTENIEPMYTPIE 57
>UniRef50_Q1UZC9 Cluster: Glu-tRNA Gln amidotransferase C subunit;
n=2; Candidatus Pelagibacter ubique|Rep: Glu-tRNA Gln
amidotransferase C subunit - Candidatus Pelagibacter
ubique HTCC1002
Length = 95
Score = 35.9 bits (79), Expect = 0.84
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 225 IDPSTITLLERLSLVKYDTPKGIKVLED--SI-TFANKILHINTDNIEPLYTTLE 380
ID TI + +LS + D K K+ D SI F K+ +NTDNIEPL + E
Sbjct: 3 IDLKTIKHISKLSRISVDDAKANKLAGDLNSIFDFIEKLNELNTDNIEPLTSVAE 57
>UniRef50_A4DH38 Cluster: Integrase; n=3; Listeria|Rep: Integrase -
Listeria monocytogenes FSL N1-017
Length = 376
Score = 35.5 bits (78), Expect = 1.1
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 177 SNPVSTVQNEDKNKIC-IDPSTITLLERLSLVKYDTPKGIKVLEDSITFANKILHINTDN 353
+N S +N N+I ID ST+++L ++ + Y + + +K DS NK++ INT+N
Sbjct: 233 TNTFSNTKNYSSNRIITIDDSTLSMLNKIKV--YQSAEKLK---DSSFNKNKLVFINTNN 287
Query: 354 IEP 362
I P
Sbjct: 288 IPP 290
>UniRef50_Q4HEI8 Cluster: Probable integral membrane protein Cj0033;
n=2; Campylobacter|Rep: Probable integral membrane
protein Cj0033 - Campylobacter coli RM2228
Length = 753
Score = 33.9 bits (74), Expect = 3.4
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 504 DLNIKIVSRYCNTE*LFDYIIK*LEFVINFTYLVRY*NLTHFLGWYKEVLYCQCLYEVFY 325
DL K + T +F Y+ K E +INF+++ +Y N H L + V + CL +FY
Sbjct: 545 DLEKKSIQNLNKTSDMFSYLTKVKEVIINFSFMQQYYN--HILISFVAVCFI-CLIVIFY 601
>UniRef50_Q9JZ00 Cluster: Glutamyl-tRNA(Gln) amidotransferase
subunit C; n=6; Betaproteobacteria|Rep:
Glutamyl-tRNA(Gln) amidotransferase subunit C -
Neisseria meningitidis serogroup B
Length = 96
Score = 33.9 bits (74), Expect = 3.4
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 228 DPSTITLLERLSLVKYDTPKGIKVLEDSITFANKILHINTDNIEPL 365
D I L RL L + K ++ L D T ++ INTD IEP+
Sbjct: 7 DVDKIARLSRLHLTAEEKEKSLQELNDIFTMVEQMQTINTDGIEPM 52
>UniRef50_Q2SRE2 Cluster: Glutamyl-tRNA(Gln) amidotransferase, C
subunit,; n=2; Mycoplasma|Rep: Glutamyl-tRNA(Gln)
amidotransferase, C subunit, - Mycoplasma capricolum
subsp. capricolum (strain California kid / ATCC27343 /
NCTC 10154)
Length = 98
Score = 33.1 bits (72), Expect = 5.9
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 548 LRPDKITQGNCQKDILKNATVKEDDY 625
LR D + Q N QK+IL+NA K D+Y
Sbjct: 65 LREDVVVQTNTQKEILENAPTKHDNY 90
>UniRef50_A6LJL8 Cluster: Glutamyl-tRNA(Gln) amidotransferase, C
subunit; n=1; Thermosipho melanesiensis BI429|Rep:
Glutamyl-tRNA(Gln) amidotransferase, C subunit -
Thermosipho melanesiensis BI429
Length = 93
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 225 IDPSTITLLERLSLVKYDTPKGI-KVLEDSITFANKILHINTDNIEPLYTTLEN 383
ID + + L+ ++ D K I ++ + + + +NTDN+EP+YT +E+
Sbjct: 3 IDEKLVEEIAFLARLEIDNKKKIINEMQKIVNYFELLNEVNTDNVEPMYTPIED 56
>UniRef50_A6REW6 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 693
Score = 33.1 bits (72), Expect = 5.9
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +3
Query: 180 NPVSTVQNEDKNKICIDPSTITLLERLSLVKYDTPKGIKVLEDSITFANKILHINTDNIE 359
+P T + D KICI+PS + RL + YD +K ED + N +
Sbjct: 584 DPTFTTASPDSRKICIEPSNL----RLHMPSYDDDATVKTQEDQDSTYNTA-------FD 632
Query: 360 PLYTTLENE*D 392
P+ L+NE D
Sbjct: 633 PMIPALQNEHD 643
>UniRef50_Q73QG0 Cluster: Membrane protein, putative; n=1; Treponema
denticola|Rep: Membrane protein, putative - Treponema
denticola
Length = 266
Score = 32.7 bits (71), Expect = 7.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 411 YLVRY*NLTHFLGWYKEVLYCQCLYEVF 328
YL+ Y + F+GW+ EV+YC L F
Sbjct: 5 YLILYFTIYSFIGWFCEVVYCSLLQRKF 32
>UniRef50_A0BEK0 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 468
Score = 32.7 bits (71), Expect = 7.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 237 YSDQCIFYFYLHFVLY*PDWKVLLNNNSWTKFFE 136
YSDQ + FY + + PD +NN WTK FE
Sbjct: 331 YSDQKVNQFYEYMNINIPDQLKNINNRIWTKLFE 364
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,435,684
Number of Sequences: 1657284
Number of extensions: 9392750
Number of successful extensions: 21456
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 20753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21450
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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